RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 THUMPD2Q9BTF0 503 aaKnown RBP14.09□□□□□ -0.15
CLN5-213ENST00000636681 SPATA31A5Q5VU36 1347 aa14.09□□□□□ -0.15
CLN5-213ENST00000636681 SPATA31A7Q8IWB4 1347 aa14.09□□□□□ -0.15
CLN5-213ENST00000636681 TRIM35Q9UPQ4 493 aa14.09□□□□□ -0.15
CLN5-213ENST00000636681 KAT6BQ8WYB5 2073 aa14.08□□□□□ -0.16
CLN5-213ENST00000636681 RIPK4P57078 832 aa14.08□□□□□ -0.16
CLN5-213ENST00000636681 NFE2L2Q16236 605 aa14.08□□□□□ -0.16
CLN5-213ENST00000636681 RAPGEF4Q8WZA2 1011 aa14.07□□□□□ -0.16
CLN5-213ENST00000636681 DISP2A7MBM2 1401 aa14.07□□□□□ -0.16
CLN5-213ENST00000636681 TATP17735 454 aaPredicted RBP14.06□□□□□ -0.16
CLN5-213ENST00000636681 VPS72Q15906 364 aa14.06□□□□□ -0.16
CLN5-213ENST00000636681 CDCA7LQ96GN5 454 aa14.06□□□□□ -0.16
CLN5-213ENST00000636681 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
CLN5-213ENST00000636681 OVOS2A0A0G2JMS6 1433 aa14.06□□□□□ -0.16
CLN5-213ENST00000636681 IL2RBP14784 551 aa14.06□□□□□ -0.16
CLN5-213ENST00000636681 FAM98CQ17RN3 349 aaKnown RBP14.06□□□□□ -0.16
CLN5-213ENST00000636681 LRRC37A3O60309 1634 aa14.05□□□□□ -0.16
CLN5-213ENST00000636681 ZNF530Q6P9A1 599 aaPredicted RBP14.05□□□□□ -0.16
CLN5-213ENST00000636681 MCM10Q7L590 875 aa14.05□□□□□ -0.16
CLN5-213ENST00000636681 RGS17Q9UGC6 210 aaPredicted RBP14.05□□□□□ -0.16
CLN5-213ENST00000636681 ATRNO75882 1429 aa14.05□□□□□ -0.16
CLN5-213ENST00000636681 CYP27B1O15528 508 aa14.04□□□□□ -0.16
CLN5-213ENST00000636681 WWC1Q8IX03 1113 aa14.04□□□□□ -0.16
CLN5-213ENST00000636681 PNNQ9H307 717 aaKnown RBP14.04□□□□□ -0.16
CLN5-213ENST00000636681 QTRT2Q9H974 415 aaKnown RBP14.04□□□□□ -0.16
CLN5-213ENST00000636681 ZBED9Q6R2W3 1325 aa14.04□□□□□ -0.16
CLN5-213ENST00000636681 ZNF521Q96K83 1311 aa14.04□□□□□ -0.16
CLN5-213ENST00000636681 BRWD3Q6RI45 1802 aa14.04□□□□□ -0.16
CLN5-213ENST00000636681 LGR6Q9HBX8 967 aa14.04□□□□□ -0.16
CLN5-213ENST00000636681 SCN11AQ9UI33 1791 aa14.03□□□□□ -0.16
CLN5-213ENST00000636681 EP400Q96L91 3159 aa14.03□□□□□ -0.16
CLN5-213ENST00000636681 NEFMP07197 916 aa14.03□□□□□ -0.16
CLN5-213ENST00000636681 PLEKHO1Q53GL0 409 aaPredicted RBP14.03□□□□□ -0.16
CLN5-213ENST00000636681 MPRIPQ6WCQ1 1025 aa14.03□□□□□ -0.16
CLN5-213ENST00000636681 TOGARAM1Q9Y4F4 1720 aa14.02□□□□□ -0.16
CLN5-213ENST00000636681 DDX54Q8TDD1 881 aaKnown RBP14.02□□□□□ -0.16
CLN5-213ENST00000636681 GJD4Q96KN9 370 aaPredicted RBP14.02□□□□□ -0.16
CLN5-213ENST00000636681 THSD7AQ9UPZ6 1657 aa14.02□□□□□ -0.17
CLN5-213ENST00000636681 IL17REQ8NFR9 667 aa14.01□□□□□ -0.17
CLN5-213ENST00000636681 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
CLN5-213ENST00000636681 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
CLN5-213ENST00000636681 FAM182BQ5T319 152 aa14.01□□□□□ -0.17
CLN5-213ENST00000636681 GAS2L2Q8NHY3 880 aa14.01□□□□□ -0.17
CLN5-213ENST00000636681 TRPC5Q9UL62 973 aaPredicted RBP14.01□□□□□ -0.17
CLN5-213ENST00000636681 KDM6AO15550 1401 aaPredicted RBP14□□□□□ -0.17
CLN5-213ENST00000636681 PHKG2P15735 406 aa14□□□□□ -0.17
CLN5-213ENST00000636681 POTEAQ6S8J7 498 aa14□□□□□ -0.17
CLN5-213ENST00000636681 SIPA1L3O60292 1781 aaPredicted RBP14□□□□□ -0.17
CLN5-213ENST00000636681 ITGB4P16144 1822 aa14□□□□□ -0.17
CLN5-213ENST00000636681 A0A0G2JS52 829 aa13.99□□□□□ -0.17
CLN5-213ENST00000636681 GNAT3A8MTJ3 354 aa13.99□□□□□ -0.17
CLN5-213ENST00000636681 MYT1Q01538 1121 aa13.99□□□□□ -0.17
CLN5-213ENST00000636681 AMOTQ4VCS5 1084 aa13.99□□□□□ -0.17
CLN5-213ENST00000636681 MIS18AQ9NYP9 233 aa13.99□□□□□ -0.17
CLN5-213ENST00000636681 SPG7Q9UQ90 795 aa13.99□□□□□ -0.17
CLN5-213ENST00000636681 ADAMTS7Q9UKP4 1686 aa13.99□□□□□ -0.17
CLN5-213ENST00000636681 BARGINQ6ZT62 677 aa13.99□□□□□ -0.17
CLN5-213ENST00000636681 THRAP3Q9Y2W1 955 aaKnown RBP13.99□□□□□ -0.17
CLN5-213ENST00000636681 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
CLN5-213ENST00000636681 CCDC27Q2M243 656 aa13.98□□□□□ -0.17
CLN5-213ENST00000636681 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
CLN5-213ENST00000636681 C1orf141Q5JVX7 400 aa13.98□□□□□ -0.17
CLN5-213ENST00000636681 MARCH10Q8NA82 808 aaPredicted RBP13.98□□□□□ -0.17
CLN5-213ENST00000636681 TSR2Q969E8 191 aaKnown RBP13.98□□□□□ -0.17
CLN5-213ENST00000636681 LAS1LQ9Y4W2 734 aaKnown RBP13.98□□□□□ -0.17
CLN5-213ENST00000636681 DOT1LQ8TEK3 1739 aa13.97□□□□□ -0.17
CLN5-213ENST00000636681 EXOC5O00471 708 aa13.97□□□□□ -0.17
CLN5-213ENST00000636681 DDB1Q16531 1140 aa13.97□□□□□ -0.17
CLN5-213ENST00000636681 IFNL2Q8IZJ0 200 aa13.97□□□□□ -0.17
CLN5-213ENST00000636681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLN5-213ENST00000636681 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.17
CLN5-213ENST00000636681 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.17
CLN5-213ENST00000636681 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.17
CLN5-213ENST00000636681 RTF1Q92541 710 aaKnown RBP13.96□□□□□ -0.18
CLN5-213ENST00000636681 GOLGA2Q08379 1002 aa13.95□□□□□ -0.18
CLN5-213ENST00000636681 SLFN5Q08AF3 891 aa13.95□□□□□ -0.18
CLN5-213ENST00000636681 ZNF772Q68DY9 489 aaPredicted RBP13.95□□□□□ -0.18
CLN5-213ENST00000636681 SEPT12Q8IYM1 358 aa13.95□□□□□ -0.18
CLN5-213ENST00000636681 CEMIPQ8WUJ3 1361 aa13.95□□□□□ -0.18
CLN5-213ENST00000636681 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
CLN5-213ENST00000636681 SBF2Q86WG5 1849 aa13.94□□□□□ -0.18
CLN5-213ENST00000636681 KCNQ3O43525 872 aa13.94□□□□□ -0.18
CLN5-213ENST00000636681 DUSP27Q5VZP5 1158 aa13.94□□□□□ -0.18
CLN5-213ENST00000636681 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
CLN5-213ENST00000636681 ONECUT3O60422 494 aaPredicted RBP13.93□□□□□ -0.18
CLN5-213ENST00000636681 KRT24Q2M2I5 525 aa13.93□□□□□ -0.18
CLN5-213ENST00000636681 PTF1AQ7RTS3 328 aa13.93□□□□□ -0.18
CLN5-213ENST00000636681 ACSBG1Q96GR2 724 aa13.93□□□□□ -0.18
CLN5-213ENST00000636681 CDCA7Q9BWT1 371 aaPredicted RBP13.93□□□□□ -0.18
CLN5-213ENST00000636681 ZNF853P0CG23 659 aa13.92□□□□□ -0.18
CLN5-213ENST00000636681 RBM6P78332 1123 aaKnown RBP13.92□□□□□ -0.18
CLN5-213ENST00000636681 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
CLN5-213ENST00000636681 TRMT2AQ8IZ69 625 aaKnown RBP13.92□□□□□ -0.18
CLN5-213ENST00000636681 NFATC2IPQ8NCF5 419 aa13.92□□□□□ -0.18
CLN5-213ENST00000636681 MBIPQ9NS73 344 aa13.92□□□□□ -0.18
CLN5-213ENST00000636681 FANCIQ9NVI1 1328 aa13.91□□□□□ -0.18
CLN5-213ENST00000636681 HTATSF1O43719 755 aaKnown RBP13.91□□□□□ -0.18
CLN5-213ENST00000636681 NKX1-1Q15270 411 aaPredicted RBP13.91□□□□□ -0.18
CLN5-213ENST00000636681 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
CLN5-213ENST00000636681 RGS12O14924 1447 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms