RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TSPYL4Q9UJ04 414 aa17.34■□□□□ 0.37
CACNA1A-228ENST00000636610 A2ML1A8K2U0 1454 aa17.34■□□□□ 0.37
CACNA1A-228ENST00000636610 ZBTB7CA1YPR0 619 aa17.34■□□□□ 0.37
CACNA1A-228ENST00000636610 EDC4Q6P2E9 1401 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-228ENST00000636610 PTCH1Q13635 1447 aa17.34■□□□□ 0.37
CACNA1A-228ENST00000636610 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
CACNA1A-228ENST00000636610 C14orf37Q86TY3 774 aa17.33■□□□□ 0.37
CACNA1A-228ENST00000636610 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
CACNA1A-228ENST00000636610 DTNBO60941 627 aa17.32■□□□□ 0.36
CACNA1A-228ENST00000636610 ANKRD44Q8N8A2 993 aa17.32■□□□□ 0.36
CACNA1A-228ENST00000636610 MTHFSDQ2M296 383 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-228ENST00000636610 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-228ENST00000636610 ERBB4Q15303 1308 aa17.32■□□□□ 0.36
CACNA1A-228ENST00000636610 USP26Q9BXU7 913 aa17.31■□□□□ 0.36
CACNA1A-228ENST00000636610 TRIM44Q96DX7 344 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-228ENST00000636610 CHL1O00533 1208 aa17.31■□□□□ 0.36
CACNA1A-228ENST00000636610 CAVIN1Q6NZI2 390 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-228ENST00000636610 RBM33Q96EV2 1170 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-228ENST00000636610 CPSF1Q10570 1443 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-228ENST00000636610 RICTORQ6R327 1708 aa17.3■□□□□ 0.36
CACNA1A-228ENST00000636610 ROBO2Q9HCK4 1378 aa17.3■□□□□ 0.36
CACNA1A-228ENST00000636610 BAG4O95429 457 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-228ENST00000636610 RILPL2Q969X0 211 aa17.3■□□□□ 0.36
CACNA1A-228ENST00000636610 AMPHP49418 695 aa17.3■□□□□ 0.36
CACNA1A-228ENST00000636610 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-228ENST00000636610 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
CACNA1A-228ENST00000636610 NGDNQ8NEJ9 315 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-228ENST00000636610 KIF20BQ96Q89 1820 aa17.29■□□□□ 0.36
CACNA1A-228ENST00000636610 TRIM6-TRIM34B2RNG4 842 aa17.29■□□□□ 0.36
CACNA1A-228ENST00000636610 MAP4K4O95819 1239 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-228ENST00000636610 FKBP5Q13451 457 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-228ENST00000636610 ATP7BP35670 1465 aa17.29■□□□□ 0.36
CACNA1A-228ENST00000636610 PIK3R4Q99570 1358 aa17.29■□□□□ 0.36
CACNA1A-228ENST00000636610 USHBP1Q8N6Y0 703 aa17.29■□□□□ 0.36
CACNA1A-228ENST00000636610 RBM27Q9P2N5 1060 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-228ENST00000636610 GOLGA6L22H0YM25 854 aa17.28■□□□□ 0.36
CACNA1A-228ENST00000636610 LTKP29376 864 aa17.28■□□□□ 0.36
CACNA1A-228ENST00000636610 NCOA3Q9Y6Q9 1424 aa17.28■□□□□ 0.36
CACNA1A-228ENST00000636610 PRPF40AO75400 957 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-228ENST00000636610 RTL1A6NKG5 1358 aa17.27■□□□□ 0.36
CACNA1A-228ENST00000636610 IL1RAPL2Q9NP60 686 aa17.27■□□□□ 0.35
CACNA1A-228ENST00000636610 CIZ1Q9ULV3 898 aaPredicted RBP17.27■□□□□ 0.35
CACNA1A-228ENST00000636610 NEK4P51957 841 aa17.26■□□□□ 0.35
CACNA1A-228ENST00000636610 RABEP1Q15276 862 aa17.26■□□□□ 0.35
CACNA1A-228ENST00000636610 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-228ENST00000636610 ANKRD26Q9UPS8 1709 aa17.26■□□□□ 0.35
CACNA1A-228ENST00000636610 CDK12Q9NYV4 1490 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-228ENST00000636610 CASC1Q6TDU7 716 aa17.26■□□□□ 0.35
CACNA1A-228ENST00000636610 LARP6Q9BRS8 491 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-228ENST00000636610 PNMA6EA0A0J9YXQ4 647 aa17.25■□□□□ 0.35
CACNA1A-228ENST00000636610 ESPNB1AK53 854 aa17.25■□□□□ 0.35
CACNA1A-228ENST00000636610 UPF3BQ9BZI7 483 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-228ENST00000636610 ATP10DQ9P241 1426 aa17.24■□□□□ 0.35
CACNA1A-228ENST00000636610 CLTCQ00610 1675 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-228ENST00000636610 EIF2S2P20042 333 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-228ENST00000636610 EYA1Q99502 592 aa17.24■□□□□ 0.35
CACNA1A-228ENST00000636610 ANO2Q9NQ90 1003 aa17.24■□□□□ 0.35
CACNA1A-228ENST00000636610 AATKQ6ZMQ8 1374 aa17.24■□□□□ 0.35
CACNA1A-228ENST00000636610 DLG5Q8TDM6 1919 aa17.24■□□□□ 0.35
CACNA1A-228ENST00000636610 PDE1AP54750 535 aa17.23■□□□□ 0.35
CACNA1A-228ENST00000636610 NLRP6P59044 892 aa17.23■□□□□ 0.35
CACNA1A-228ENST00000636610 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
CACNA1A-228ENST00000636610 NASPP49321 788 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-228ENST00000636610 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
CACNA1A-228ENST00000636610 RGS12O14924 1447 aa17.22■□□□□ 0.35
CACNA1A-228ENST00000636610 ST18O60284 1047 aa17.22■□□□□ 0.35
CACNA1A-228ENST00000636610 PALD1Q9ULE6 856 aa17.22■□□□□ 0.35
CACNA1A-228ENST00000636610 ANXA1P04083 346 aa17.22■□□□□ 0.35
CACNA1A-228ENST00000636610 NUTM1Q86Y26 1132 aa17.21■□□□□ 0.35
CACNA1A-228ENST00000636610 UNC5CLQ8IV45 518 aa17.21■□□□□ 0.35
CACNA1A-228ENST00000636610 HMMRO75330 724 aa17.21■□□□□ 0.35
CACNA1A-228ENST00000636610 SKOR2Q2VWA4 1001 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-228ENST00000636610 NSFL1CQ9UNZ2 370 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-228ENST00000636610 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-228ENST00000636610 ERC2O15083 957 aa17.21■□□□□ 0.34
CACNA1A-228ENST00000636610 MPNDQ8N594 471 aa17.21■□□□□ 0.34
CACNA1A-228ENST00000636610 GDPD2Q9HCC8 539 aa17.21■□□□□ 0.34
CACNA1A-228ENST00000636610 RNF214Q8ND24 703 aa17.2■□□□□ 0.34
CACNA1A-228ENST00000636610 GNAI2P04899 355 aa17.2■□□□□ 0.34
CACNA1A-228ENST00000636610 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-228ENST00000636610 FLIIQ13045 1269 aa17.2■□□□□ 0.34
CACNA1A-228ENST00000636610 CDC42BPGQ6DT37 1551 aa17.2■□□□□ 0.34
CACNA1A-228ENST00000636610 AMOTL2Q9Y2J4 779 aa17.2■□□□□ 0.34
CACNA1A-228ENST00000636610 REC8O95072 547 aa17.19■□□□□ 0.34
CACNA1A-228ENST00000636610 CLCN1P35523 988 aa17.19■□□□□ 0.34
CACNA1A-228ENST00000636610 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-228ENST00000636610 ZDHHC9Q9Y397 364 aa17.19■□□□□ 0.34
CACNA1A-228ENST00000636610 PTPRCP08575 1304 aa17.18■□□□□ 0.34
CACNA1A-228ENST00000636610 KLHL40Q2TBA0 621 aa17.18■□□□□ 0.34
CACNA1A-228ENST00000636610 IL25Q9H293 177 aa17.18■□□□□ 0.34
CACNA1A-228ENST00000636610 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
CACNA1A-228ENST00000636610 PRIM1P49642 420 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-228ENST00000636610 ZSCAN23Q3MJ62 389 aa17.17■□□□□ 0.34
CACNA1A-228ENST00000636610 TMX3Q96JJ7 454 aa17.17■□□□□ 0.34
CACNA1A-228ENST00000636610 LRRCC1Q9C099 1032 aa17.17■□□□□ 0.34
CACNA1A-228ENST00000636610 MX1P20591 662 aa17.16■□□□□ 0.34
CACNA1A-228ENST00000636610 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-228ENST00000636610 NUCB2P80303 420 aa17.16■□□□□ 0.34
CACNA1A-228ENST00000636610 ANP32BQ92688 251 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-228ENST00000636610 SYCE3A1L190 88 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms