RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TWISTNBQ3B726 338 aaPredicted RBP21■□□□□ 0.95
CACNA1A-227ENST00000636549 RBM26Q5T8P6 1007 aaKnown RBP21■□□□□ 0.95
CACNA1A-227ENST00000636549 LARP6Q9BRS8 491 aaKnown RBP21■□□□□ 0.95
CACNA1A-227ENST00000636549 SEC63Q9UGP8 760 aaKnown RBP21■□□□□ 0.95
CACNA1A-227ENST00000636549 DPH6Q7L8W6 267 aa21■□□□□ 0.95
CACNA1A-227ENST00000636549 GNAI2P04899 355 aa21■□□□□ 0.95
CACNA1A-227ENST00000636549 NF2P35240 595 aa20.99■□□□□ 0.95
CACNA1A-227ENST00000636549 DZIP1Q86YF9 867 aaKnown RBP20.99■□□□□ 0.95
CACNA1A-227ENST00000636549 CDK19Q9BWU1 502 aa20.99■□□□□ 0.95
CACNA1A-227ENST00000636549 C6orf229H3BNL8 230 aa20.99■□□□□ 0.95
CACNA1A-227ENST00000636549 GPTP24298 496 aa20.99■□□□□ 0.95
CACNA1A-227ENST00000636549 EIF5P55010 431 aaKnown RBP20.99■□□□□ 0.95
CACNA1A-227ENST00000636549 SAMM50Q9Y512 469 aa20.99■□□□□ 0.95
CACNA1A-227ENST00000636549 EZRP15311 586 aaKnown RBP20.99■□□□□ 0.95
CACNA1A-227ENST00000636549 ARL1P40616 181 aaPredicted RBP20.99■□□□□ 0.95
CACNA1A-227ENST00000636549 FAM43AQ8N2R8 423 aa20.99■□□□□ 0.95
CACNA1A-227ENST00000636549 NUCB2P80303 420 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 TNMDQ9H2S6 317 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 CCDC178Q5BJE1 867 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 RAB11FIP4Q86YS3 637 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 ERCC4Q92889 916 aaPredicted RBP20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 FEZ1Q99689 392 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 USP8P40818 1118 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 CEP57L1Q8IYX8 460 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 AIDAQ96BJ3 306 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 KIF20AO95235 890 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 GAS2L2Q8NHY3 880 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 FERMT2Q96AC1 680 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 RAPGEF2Q9Y4G8 1499 aa20.98■□□□□ 0.95
CACNA1A-227ENST00000636549 TNIP1Q15025 636 aa20.97■□□□□ 0.95
CACNA1A-227ENST00000636549 BMP2KQ9NSY1 1161 aaPredicted RBP20.97■□□□□ 0.95
CACNA1A-227ENST00000636549 RANBP6O60518 1105 aaKnown RBP20.97■□□□□ 0.95
CACNA1A-227ENST00000636549 JARID2Q92833 1246 aaPredicted RBP20.97■□□□□ 0.95
CACNA1A-227ENST00000636549 NOL7Q9UMY1 257 aaKnown RBP20.97■□□□□ 0.95
CACNA1A-227ENST00000636549 HOMER2Q9NSB8 354 aa20.96■□□□□ 0.95
CACNA1A-227ENST00000636549 ERICH4A6NGS2 130 aa20.95■□□□□ 0.94
CACNA1A-227ENST00000636549 PLS1Q14651 629 aa20.95■□□□□ 0.94
CACNA1A-227ENST00000636549 LEKR1Q6ZMV7 388 aa20.95■□□□□ 0.94
CACNA1A-227ENST00000636549 CYP46A1Q9Y6A2 500 aa20.95■□□□□ 0.94
CACNA1A-227ENST00000636549 CABP1Q9NZU7 370 aa20.95■□□□□ 0.94
CACNA1A-227ENST00000636549 BIN2Q9UBW5 565 aaPredicted RBP20.95■□□□□ 0.94
CACNA1A-227ENST00000636549 CDCA7LQ96GN5 454 aa20.95■□□□□ 0.94
CACNA1A-227ENST00000636549 JAKMIP1Q96N16 626 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-227ENST00000636549 MYD88Q99836 296 aa20.94■□□□□ 0.94
CACNA1A-227ENST00000636549 CCDC39Q9UFE4 941 aa20.94■□□□□ 0.94
CACNA1A-227ENST00000636549 CBX1P83916 185 aa20.94■□□□□ 0.94
CACNA1A-227ENST00000636549 WIZO95785 1651 aa20.94■□□□□ 0.94
CACNA1A-227ENST00000636549 MIA2Q96PC5 1412 aa20.94■□□□□ 0.94
CACNA1A-227ENST00000636549 ACSBG1Q96GR2 724 aa20.93■□□□□ 0.94
CACNA1A-227ENST00000636549 ATXN8OSP0DMR3 200 aa20.93■□□□□ 0.94
CACNA1A-227ENST00000636549 SRRTQ9BXP5 876 aaKnown RBP20.93■□□□□ 0.94
CACNA1A-227ENST00000636549 GRIPAP1Q4V328 841 aa20.93■□□□□ 0.94
CACNA1A-227ENST00000636549 TMOD3Q9NYL9 352 aa20.93■□□□□ 0.94
CACNA1A-227ENST00000636549 ADAMTS8Q9UP79 889 aa20.92■□□□□ 0.94
CACNA1A-227ENST00000636549 MROH2BQ7Z745 1585 aa20.92■□□□□ 0.94
CACNA1A-227ENST00000636549 CFAP70Q5T0N1 1121 aa20.92■□□□□ 0.94
CACNA1A-227ENST00000636549 DYDC1Q8WWB3 177 aa20.92■□□□□ 0.94
CACNA1A-227ENST00000636549 SMC1AQ14683 1233 aaKnown RBP20.92■□□□□ 0.94
CACNA1A-227ENST00000636549 SRGAP3O43295 1099 aa20.91■□□□□ 0.94
CACNA1A-227ENST00000636549 RGS22Q8NE09 1264 aa20.91■□□□□ 0.94
CACNA1A-227ENST00000636549 LRRCC1Q9C099 1032 aa20.91■□□□□ 0.94
CACNA1A-227ENST00000636549 TMCO5BA8MYB1 307 aa20.91■□□□□ 0.94
CACNA1A-227ENST00000636549 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.91■□□□□ 0.94
CACNA1A-227ENST00000636549 RSPH6AQ9H0K4 717 aa20.91■□□□□ 0.94
CACNA1A-227ENST00000636549 LARP1BQ659C4 914 aaKnown RBP20.91■□□□□ 0.94
CACNA1A-227ENST00000636549 SMARCA5O60264 1052 aaPredicted RBP20.91■□□□□ 0.94
CACNA1A-227ENST00000636549 ATP2B3Q16720 1220 aa20.91■□□□□ 0.94
CACNA1A-227ENST00000636549 CCDC102AQ96A19 550 aa20.91■□□□□ 0.94
CACNA1A-227ENST00000636549 CTNNA2P26232 953 aa20.9■□□□□ 0.94
CACNA1A-227ENST00000636549 CAVIN4Q5BKX8 364 aa20.9■□□□□ 0.94
CACNA1A-227ENST00000636549 GNAI3P08754 354 aa20.9■□□□□ 0.94
CACNA1A-227ENST00000636549 AKNAD1Q5T1N1 836 aa20.9■□□□□ 0.94
CACNA1A-227ENST00000636549 JAKMIP3Q5VZ66 844 aa20.9■□□□□ 0.94
CACNA1A-227ENST00000636549 POTEJP0CG39 1038 aa20.9■□□□□ 0.94
CACNA1A-227ENST00000636549 EP400NLQ6ZTU2 488 aa20.9■□□□□ 0.94
CACNA1A-227ENST00000636549 ISM2Q6H9L7 571 aa20.9■□□□□ 0.94
CACNA1A-227ENST00000636549 KIAA0754O94854 1291 aa20.89■□□□□ 0.94
CACNA1A-227ENST00000636549 CFAP45Q9UL16 551 aa20.89■□□□□ 0.93
CACNA1A-227ENST00000636549 GSTTP1A0A1W2PQM5 241 aa20.89■□□□□ 0.93
CACNA1A-227ENST00000636549 CPLX3Q8WVH0 158 aa20.89■□□□□ 0.93
CACNA1A-227ENST00000636549 CUL5Q93034 780 aa20.89■□□□□ 0.93
CACNA1A-227ENST00000636549 FAM212AQ96EL1 285 aa20.89■□□□□ 0.93
CACNA1A-227ENST00000636549 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.93
CACNA1A-227ENST00000636549 PDRG1Q9NUG6 133 aa20.89■□□□□ 0.93
CACNA1A-227ENST00000636549 AFAP1Q8N556 730 aa20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 BICD1Q96G01 975 aa20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 PDZRN3Q9UPQ7 1066 aa20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 CKAP2LQ8IYA6 745 aa20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 ZNF444Q8N0Y2 327 aaPredicted RBP20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 PROCA1Q8NCQ7 364 aaPredicted RBP20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 CEP63Q96MT8 703 aa20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 ZNF408Q9H9D4 720 aa20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 CCDC150Q8NCX0 1101 aa20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 TAF4BQ92750 862 aa20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 LMAN1P49257 510 aa20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 MAP2K1Q02750 393 aaPredicted RBP20.88■□□□□ 0.93
CACNA1A-227ENST00000636549 OTUD6BQ8N6M0 293 aa20.87■□□□□ 0.93
CACNA1A-227ENST00000636549 TICAM2Q86XR7 235 aa20.87■□□□□ 0.93
CACNA1A-227ENST00000636549 TCP11L2Q8N4U5 519 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms