RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
CLN5-210ENST00000636520 NOD1Q9Y239 953 aa8.51□□□□□ -1.05
CLN5-210ENST00000636520 ADAMTS12P58397 1594 aa8.51□□□□□ -1.05
CLN5-210ENST00000636520 HLA-DOAP06340 250 aa8.51□□□□□ -1.05
CLN5-210ENST00000636520 HDGFL1Q5TGJ6 251 aa8.51□□□□□ -1.05
CLN5-210ENST00000636520 HMOX1P09601 288 aa8.51□□□□□ -1.05
CLN5-210ENST00000636520 PTPRTO14522 1441 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 CHAF1AQ13111 956 aaPredicted RBP8.5□□□□□ -1.05
CLN5-210ENST00000636520 NFE2L2Q16236 605 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 SPTY2D1Q68D10 685 aaPredicted RBP8.5□□□□□ -1.05
CLN5-210ENST00000636520 NR2E3Q9Y5X4 410 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 FYB1O15117 783 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 PRIM1P49642 420 aaKnown RBP8.5□□□□□ -1.05
CLN5-210ENST00000636520 PDE3AQ14432 1141 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 MTFR1LQ9H019 292 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 NIP7Q9Y221 180 aaKnown RBP eCLIP8.5□□□□□ -1.05
CLN5-210ENST00000636520 TTC21BQ7Z4L5 1316 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 NECTIN2Q92692 538 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 PICK1Q9NRD5 415 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 PPIP5K2O43314 1243 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 NCLP19338 710 aaKnown RBP8.5□□□□□ -1.05
CLN5-210ENST00000636520 CCDC158Q5M9N0 1113 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 SIRT1Q96EB6 747 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 CEP126Q9P2H0 1117 aa8.5□□□□□ -1.05
CLN5-210ENST00000636520 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
CLN5-210ENST00000636520 VPS72Q15906 364 aa8.49□□□□□ -1.05
CLN5-210ENST00000636520 TTLL6Q8N841 843 aa8.49□□□□□ -1.05
CLN5-210ENST00000636520 PPP4R3BQ5MIZ7 849 aa8.49□□□□□ -1.05
CLN5-210ENST00000636520 BRINP3Q76B58 766 aa8.49□□□□□ -1.05
CLN5-210ENST00000636520 DZIP1Q86YF9 867 aaKnown RBP8.49□□□□□ -1.05
CLN5-210ENST00000636520 SMCR8Q8TEV9 937 aaPredicted RBP8.49□□□□□ -1.05
CLN5-210ENST00000636520 NOP2P46087 812 aaKnown RBP8.49□□□□□ -1.05
CLN5-210ENST00000636520 CCDC93Q567U6 631 aa8.49□□□□□ -1.05
CLN5-210ENST00000636520 DPP8Q6V1X1 898 aaPredicted RBP8.49□□□□□ -1.05
CLN5-210ENST00000636520 PAF1Q8N7H5 531 aa8.49□□□□□ -1.05
CLN5-210ENST00000636520 KIF3AQ9Y496 699 aa8.49□□□□□ -1.05
CLN5-210ENST00000636520 UNC13AQ9UPW8 1703 aa8.49□□□□□ -1.05
CLN5-210ENST00000636520 MYL6BP14649 208 aa8.49□□□□□ -1.05
CLN5-210ENST00000636520 API5Q9BZZ5 524 aaKnown RBP8.49□□□□□ -1.05
CLN5-210ENST00000636520 TRAF1Q13077 416 aa8.48□□□□□ -1.05
CLN5-210ENST00000636520 TNS4Q8IZW8 715 aa8.48□□□□□ -1.05
CLN5-210ENST00000636520 LBHD1Q9BQE6 289 aaPredicted RBP8.48□□□□□ -1.05
CLN5-210ENST00000636520 NSFL1CQ9UNZ2 370 aaKnown RBP8.48□□□□□ -1.05
CLN5-210ENST00000636520 CFAP43Q8NDM7 1665 aa8.48□□□□□ -1.05
CLN5-210ENST00000636520 IFIT2P09913 472 aaKnown RBP8.48□□□□□ -1.05
CLN5-210ENST00000636520 DCAF5Q96JK2 942 aa8.48□□□□□ -1.05
CLN5-210ENST00000636520 NACAP1Q9BZK3 213 aa8.48□□□□□ -1.05
CLN5-210ENST00000636520 PANK3Q9H999 370 aa8.48□□□□□ -1.05
CLN5-210ENST00000636520 RIPK4P57078 832 aa8.48□□□□□ -1.05
CLN5-210ENST00000636520 CDK13Q14004 1512 aaKnown RBP8.48□□□□□ -1.05
CLN5-210ENST00000636520 TSPOAP1O95153 1857 aa8.48□□□□□ -1.05
CLN5-210ENST00000636520 GPATCH8Q9UKJ3 1502 aaKnown RBP8.48□□□□□ -1.05
CLN5-210ENST00000636520 SNRPA1P09661 255 aaKnown RBP8.48□□□□□ -1.05
CLN5-210ENST00000636520 ANKRD18AQ8IVF6 992 aa8.48□□□□□ -1.05
CLN5-210ENST00000636520 RTKN2Q8IZC4 609 aa8.48□□□□□ -1.05
CLN5-210ENST00000636520 ZGPATQ8N5A5 531 aaKnown RBP8.48□□□□□ -1.05
CLN5-210ENST00000636520 ZBTB24O43167 697 aaPredicted RBP8.47□□□□□ -1.05
CLN5-210ENST00000636520 CHMP4BP1P59074 171 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLN5-210ENST00000636520 DNAI2Q9GZS0 605 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 TRIM21P19474 475 aaKnown RBP8.47□□□□□ -1.05
CLN5-210ENST00000636520 SUPT20HL1Q3ZLR7 823 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 DCAF15Q66K64 600 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 NBPF11Q86T75 865 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 NBPF3Q9H094 633 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 TAOK3Q9H2K8 898 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 GPHNQ9NQX3 736 aaPredicted RBP8.47□□□□□ -1.05
CLN5-210ENST00000636520 PRXQ9BXM0 1461 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 BAG3O95817 575 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 PARP10Q53GL7 1025 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 ZNF804AQ7Z570 1209 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 C14orf93Q9H972 538 aaKnown RBP8.47□□□□□ -1.05
CLN5-210ENST00000636520 ABCA8O94911 1581 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 ELL2O00472 640 aaPredicted RBP8.47□□□□□ -1.05
CLN5-210ENST00000636520 VEGFAP15692 232 aaPredicted RBP8.47□□□□□ -1.05
CLN5-210ENST00000636520 PNMA8AQ86V59 439 aaPredicted RBP8.47□□□□□ -1.05
CLN5-210ENST00000636520 TMOD4Q9NZQ9 345 aa8.47□□□□□ -1.05
CLN5-210ENST00000636520 UGGT1Q9NYU2 1555 aa8.46□□□□□ -1.05
CLN5-210ENST00000636520 PPIP5K1Q6PFW1 1433 aa8.46□□□□□ -1.05
CLN5-210ENST00000636520 UGGT2Q9NYU1 1516 aa8.46□□□□□ -1.05
CLN5-210ENST00000636520 ZSCAN25Q6NSZ9 544 aa8.46□□□□□ -1.05
CLN5-210ENST00000636520 EP400NLQ6ZTU2 488 aa8.46□□□□□ -1.05
CLN5-210ENST00000636520 SCLT1Q96NL6 688 aa8.46□□□□□ -1.05
CLN5-210ENST00000636520 RAI14Q9P0K7 980 aa8.46□□□□□ -1.05
CLN5-210ENST00000636520 A2ML1A8K2U0 1454 aa8.46□□□□□ -1.06
CLN5-210ENST00000636520 LTKP29376 864 aa8.46□□□□□ -1.06
CLN5-210ENST00000636520 MFAP1P55081 439 aaKnown RBP8.46□□□□□ -1.06
CLN5-210ENST00000636520 TXNRD1Q16881 649 aa8.46□□□□□ -1.06
CLN5-210ENST00000636520 LARP1Q6PKG0 1096 aaKnown RBP8.46□□□□□ -1.06
CLN5-210ENST00000636520 USP48Q86UV5 1035 aa8.46□□□□□ -1.06
CLN5-210ENST00000636520 DZIP3Q86Y13 1208 aaKnown RBP8.46□□□□□ -1.06
CLN5-210ENST00000636520 CCDC85CA6NKD9 419 aa8.46□□□□□ -1.06
CLN5-210ENST00000636520 SKIV2LQ15477 1246 aaKnown RBP8.46□□□□□ -1.06
CLN5-210ENST00000636520 ANKRD18BA2A2Z9 1011 aa8.46□□□□□ -1.06
CLN5-210ENST00000636520 GSTO1P78417 241 aa8.46□□□□□ -1.06
CLN5-210ENST00000636520 SART3Q15020 963 aaKnown RBP8.46□□□□□ -1.06
CLN5-210ENST00000636520 DEFB132Q7Z7B7 95 aa8.46□□□□□ -1.06
CLN5-210ENST00000636520 SMC1BQ8NDV3 1235 aa8.46□□□□□ -1.06
CLN5-210ENST00000636520 THOC2Q8NI27 1593 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms