RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	SHANK3	Q9BYB0	1731 aa		10.21	□□□□□ -0.78
CACNA1A-222	ENST00000636022	MEGF6	O75095	1541 aa		10.2	□□□□□ -0.78
CACNA1A-222	ENST00000636022	NBPF6	Q5VWK0	638 aa		10.2	□□□□□ -0.78
CACNA1A-222	ENST00000636022	NBPF4	Q96M43	638 aa		10.2	□□□□□ -0.78
CACNA1A-222	ENST00000636022	PAPPA	Q13219	1627 aa		10.19	□□□□□ -0.78
CACNA1A-222	ENST00000636022	NSD3	Q9BZ95	1437 aa		10.19	□□□□□ -0.78
CACNA1A-222	ENST00000636022	INSR	P06213	1382 aa		10.19	□□□□□ -0.78
CACNA1A-222	ENST00000636022	SLC15A2	Q16348	729 aa		10.19	□□□□□ -0.78
CACNA1A-222	ENST00000636022	HSP90AB2P	Q58FF8	381 aa		10.19	□□□□□ -0.78
CACNA1A-222	ENST00000636022	DDX54	Q8TDD1	881 aa	Known RBP	10.19	□□□□□ -0.78
CACNA1A-222	ENST00000636022	KIF24	Q5T7B8	1368 aa		10.18	□□□□□ -0.78
CACNA1A-222	ENST00000636022	LRRC4B	Q9NT99	713 aa		10.18	□□□□□ -0.78
CACNA1A-222	ENST00000636022	STK32B	Q9NY57	414 aa		10.18	□□□□□ -0.78
CACNA1A-222	ENST00000636022	NSD2	O96028	1365 aa		10.17	□□□□□ -0.78
CACNA1A-222	ENST00000636022	FLT4	P35916	1363 aa		10.17	□□□□□ -0.78
CACNA1A-222	ENST00000636022	PTGER2	P43116	358 aa		10.17	□□□□□ -0.78
CACNA1A-222	ENST00000636022	USHBP1	Q8N6Y0	703 aa		10.17	□□□□□ -0.78
CACNA1A-222	ENST00000636022	ZCRB1	Q8TBF4	217 aa	Known RBP	10.17	□□□□□ -0.78
CACNA1A-222	ENST00000636022	SMG6	Q86US8	1419 aa	Known RBP	10.16	□□□□□ -0.78
CACNA1A-222	ENST00000636022	DOT1L	Q8TEK3	1739 aa		10.16	□□□□□ -0.78
CACNA1A-222	ENST00000636022	ANKRD26	Q9UPS8	1709 aa		10.16	□□□□□ -0.78
CACNA1A-222	ENST00000636022	CGNL1	Q0VF96	1302 aa		10.16	□□□□□ -0.78
CACNA1A-222	ENST00000636022	ZBTB7A	O95365	584 aa		10.16	□□□□□ -0.78
CACNA1A-222	ENST00000636022	PRIM1	P49642	420 aa	Known RBP	10.16	□□□□□ -0.78
CACNA1A-222	ENST00000636022	EMILIN1	Q9Y6C2	1016 aa		10.16	□□□□□ -0.78
CACNA1A-222	ENST00000636022	MAP2	P11137	1827 aa	Known RBP	10.16	□□□□□ -0.78
CACNA1A-222	ENST00000636022	NCAPD2	Q15021	1401 aa		10.16	□□□□□ -0.78
CACNA1A-222	ENST00000636022	ZNF827	Q17R98	1081 aa		10.15	□□□□□ -0.78
CACNA1A-222	ENST00000636022	SLC27A3	Q5K4L6	730 aa		10.15	□□□□□ -0.78
CACNA1A-222	ENST00000636022	AKT1S1	Q96B36	256 aa		10.15	□□□□□ -0.78
CACNA1A-222	ENST00000636022	SGIP1	Q9BQI5	828 aa		10.15	□□□□□ -0.78
CACNA1A-222	ENST00000636022	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.15	□□□□□ -0.78
CACNA1A-222	ENST00000636022	LY75	O60449	1722 aa		10.15	□□□□□ -0.78
CACNA1A-222	ENST00000636022	HSPA5	P11021	654 aa	Known RBP	10.14	□□□□□ -0.79
CACNA1A-222	ENST00000636022	KCNA4	P22459	653 aa		10.14	□□□□□ -0.79
CACNA1A-222	ENST00000636022	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
CACNA1A-222	ENST00000636022	RAPGEF4	Q8WZA2	1011 aa		10.14	□□□□□ -0.79
CACNA1A-222	ENST00000636022	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.14	□□□□□ -0.79
CACNA1A-222	ENST00000636022	QSER1	Q2KHR3	1735 aa		10.13	□□□□□ -0.79
CACNA1A-222	ENST00000636022	WASHC2A	Q641Q2	1341 aa		10.13	□□□□□ -0.79
CACNA1A-222	ENST00000636022	TAT	P17735	454 aa	Predicted RBP	10.13	□□□□□ -0.79
CACNA1A-222	ENST00000636022	CCER1	Q8TC90	406 aa	Predicted RBP	10.13	□□□□□ -0.79
CACNA1A-222	ENST00000636022	SYTL4	Q96C24	671 aa	Predicted RBP	10.13	□□□□□ -0.79
CACNA1A-222	ENST00000636022	MTFR1L	Q9H019	292 aa		10.13	□□□□□ -0.79
CACNA1A-222	ENST00000636022	RNF39	Q9H2S5	420 aa		10.13	□□□□□ -0.79
CACNA1A-222	ENST00000636022	POLK	Q9UBT6	870 aa		10.13	□□□□□ -0.79
CACNA1A-222	ENST00000636022	TUBGCP6	Q96RT7	1819 aa		10.12	□□□□□ -0.79
CACNA1A-222	ENST00000636022	CYP27B1	O15528	508 aa		10.12	□□□□□ -0.79
CACNA1A-222	ENST00000636022	KCNQ4	P56696	695 aa		10.12	□□□□□ -0.79
CACNA1A-222	ENST00000636022	C1QBP	Q07021	282 aa	Known RBP	10.12	□□□□□ -0.79
CACNA1A-222	ENST00000636022	PKD1L3	Q7Z443	1732 aa		10.12	□□□□□ -0.79
CACNA1A-222	ENST00000636022	PCDH11X	Q9BZA7	1347 aa		10.11	□□□□□ -0.79
CACNA1A-222	ENST00000636022	PCDH11Y	Q9BZA8	1340 aa		10.11	□□□□□ -0.79
CACNA1A-222	ENST00000636022	COL24A1	Q17RW2	1714 aa		10.11	□□□□□ -0.79
CACNA1A-222	ENST00000636022	PPM1G	O15355	546 aa	Predicted RBP	10.11	□□□□□ -0.79
CACNA1A-222	ENST00000636022	EYA1	Q99502	592 aa		10.11	□□□□□ -0.79
CACNA1A-222	ENST00000636022	TOGARAM1	Q9Y4F4	1720 aa		10.1	□□□□□ -0.79
CACNA1A-222	ENST00000636022	PNPLA7	Q6ZV29	1317 aa		10.1	□□□□□ -0.79
CACNA1A-222	ENST00000636022	ITGB4	P16144	1822 aa		10.1	□□□□□ -0.79
CACNA1A-222	ENST00000636022	POLR3GL	Q9BT43	218 aa		10.1	□□□□□ -0.79
CACNA1A-222	ENST00000636022	PANK3	Q9H999	370 aa		10.1	□□□□□ -0.79
CACNA1A-222	ENST00000636022	NKX1-1	Q15270	411 aa	Predicted RBP	10.09	□□□□□ -0.79
CACNA1A-222	ENST00000636022	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.09	□□□□□ -0.79
CACNA1A-222	ENST00000636022	CCNL1	Q9UK58	526 aa	Predicted RBP	10.09	□□□□□ -0.79
CACNA1A-222	ENST00000636022	TAF1L	Q8IZX4	1826 aa		10.08	□□□□□ -0.8
CACNA1A-222	ENST00000636022	TNNT2	P45379	298 aa	Predicted RBP	10.08	□□□□□ -0.8
CACNA1A-222	ENST00000636022	EIF4A2	Q14240	407 aa	Known RBP	10.08	□□□□□ -0.8
CACNA1A-222	ENST00000636022	SLC16A10	Q8TF71	515 aa		10.08	□□□□□ -0.8
CACNA1A-222	ENST00000636022	ARX	Q96QS3	562 aa		10.08	□□□□□ -0.8
CACNA1A-222	ENST00000636022	SYT17	Q9BSW7	474 aa		10.08	□□□□□ -0.8
CACNA1A-222	ENST00000636022	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
CACNA1A-222	ENST00000636022	TFCP2L1	Q9NZI6	479 aa		10.08	□□□□□ -0.8
CACNA1A-222	ENST00000636022	MAP3K5	Q99683	1374 aa		10.07	□□□□□ -0.8
CACNA1A-222	ENST00000636022	MPRIP	Q6WCQ1	1025 aa		10.07	□□□□□ -0.8
CACNA1A-222	ENST00000636022	PIGB	Q92521	554 aa		10.07	□□□□□ -0.8
CACNA1A-222	ENST00000636022	SPG7	Q9UQ90	795 aa		10.07	□□□□□ -0.8
CACNA1A-222	ENST00000636022	C5	P01031	1676 aa		10.06	□□□□□ -0.8
CACNA1A-222	ENST00000636022	PALLD	Q8WX93	1383 aa		10.06	□□□□□ -0.8
CACNA1A-222	ENST00000636022	PLEKHG2	Q9H7P9	1386 aa		10.06	□□□□□ -0.8
CACNA1A-222	ENST00000636022	IGSF1	Q8N6C5	1336 aa		10.06	□□□□□ -0.8
CACNA1A-222	ENST00000636022	PHKG2	P15735	406 aa		10.05	□□□□□ -0.8
CACNA1A-222	ENST00000636022	YY1	P25490	414 aa		10.05	□□□□□ -0.8
CACNA1A-222	ENST00000636022	COL23A1	Q86Y22	540 aa	Predicted RBP	10.05	□□□□□ -0.8
CACNA1A-222	ENST00000636022	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.04	□□□□□ -0.8
CACNA1A-222	ENST00000636022	IFNL2	Q8IZJ0	200 aa		10.04	□□□□□ -0.8
CACNA1A-222	ENST00000636022	SMARCC1	Q92922	1105 aa	Predicted RBP	10.04	□□□□□ -0.8
CACNA1A-222	ENST00000636022	KIF7	Q2M1P5	1343 aa		10.04	□□□□□ -0.8
CACNA1A-222	ENST00000636022	C4B	P0C0L5	1744 aa		10.03	□□□□□ -0.8
CACNA1A-222	ENST00000636022	POLD1	P28340	1107 aa		10.03	□□□□□ -0.8
CACNA1A-222	ENST00000636022	MORC1	Q86VD1	984 aa		10.03	□□□□□ -0.8
CACNA1A-222	ENST00000636022	KNSTRN	Q9Y448	316 aa		10.03	□□□□□ -0.8
CACNA1A-222	ENST00000636022	UBR3	Q6ZT12	1888 aa		10.02	□□□□□ -0.8
CACNA1A-222	ENST00000636022	CHD4	Q14839	1912 aa		10.02	□□□□□ -0.81
CACNA1A-222	ENST00000636022	HMGB2	P26583	209 aa	Known RBP	10.02	□□□□□ -0.81
CACNA1A-222	ENST00000636022	AMIGO3	Q86WK7	504 aa		10.02	□□□□□ -0.81
CACNA1A-222	ENST00000636022	TMOD3	Q9NYL9	352 aa		10.02	□□□□□ -0.81
CACNA1A-222	ENST00000636022	ASAP1	Q9ULH1	1129 aa		10.02	□□□□□ -0.81
CACNA1A-222	ENST00000636022	LOC102724428	A0A0B4J2F2	783 aa		10.01	□□□□□ -0.81
CACNA1A-222	ENST00000636022	PER1	O15534	1290 aa	Predicted RBP	10.01	□□□□□ -0.81
CACNA1A-222	ENST00000636022	IL13	P35225	146 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms