RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CPSF1Q10570 1443 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-220ENST00000635988 KNDC1Q76NI1 1749 aa18.12■□□□□ 0.49
CACNA1A-220ENST00000635988 IL13P35225 146 aa18.12■□□□□ 0.49
CACNA1A-220ENST00000635988 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-220ENST00000635988 ERC2O15083 957 aa18.11■□□□□ 0.49
CACNA1A-220ENST00000635988 ATP10DQ9P241 1426 aa18.11■□□□□ 0.49
CACNA1A-220ENST00000635988 ZDHHC9Q9Y397 364 aa18.11■□□□□ 0.49
CACNA1A-220ENST00000635988 CDK12Q9NYV4 1490 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-220ENST00000635988 RIMS2Q9UQ26 1411 aa18.11■□□□□ 0.49
CACNA1A-220ENST00000635988 C16orf71Q8IYS4 520 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-220ENST00000635988 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-220ENST00000635988 DYNC1I1O14576 645 aa18.1■□□□□ 0.49
CACNA1A-220ENST00000635988 CEP85Q6P2H3 762 aa18.1■□□□□ 0.49
CACNA1A-220ENST00000635988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.09■□□□□ 0.49
CACNA1A-220ENST00000635988 TMEM63CQ9P1W3 806 aa18.09■□□□□ 0.49
CACNA1A-220ENST00000635988 UQCRHLA0A096LP55 91 aa18.09■□□□□ 0.49
CACNA1A-220ENST00000635988 UQCRHP07919 91 aa18.09■□□□□ 0.49
CACNA1A-220ENST00000635988 XPCQ01831 940 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-220ENST00000635988 RBM27Q9P2N5 1060 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-220ENST00000635988 AATKQ6ZMQ8 1374 aa18.08■□□□□ 0.49
CACNA1A-220ENST00000635988 SYAP1Q96A49 352 aaPredicted RBP18.08■□□□□ 0.49
CACNA1A-220ENST00000635988 SYCE3A1L190 88 aa18.08■□□□□ 0.48
CACNA1A-220ENST00000635988 HMMRO75330 724 aa18.07■□□□□ 0.48
CACNA1A-220ENST00000635988 PLEKHG5O94827 1062 aa18.07■□□□□ 0.48
CACNA1A-220ENST00000635988 RBM10P98175 930 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-220ENST00000635988 FAM13BQ9NYF5 915 aa18.07■□□□□ 0.48
CACNA1A-220ENST00000635988 PTPRCP08575 1304 aa18.07■□□□□ 0.48
CACNA1A-220ENST00000635988 MAP2P11137 1827 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-220ENST00000635988 SASS6Q6UVJ0 657 aa18.07■□□□□ 0.48
CACNA1A-220ENST00000635988 OSBPL3Q9H4L5 887 aa18.07■□□□□ 0.48
CACNA1A-220ENST00000635988 OTUD7AQ8TE49 926 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-220ENST00000635988 TMEM131LA2VDJ0 1609 aa18.06■□□□□ 0.48
CACNA1A-220ENST00000635988 RTL1A6NKG5 1358 aa18.05■□□□□ 0.48
CACNA1A-220ENST00000635988 EDC4Q6P2E9 1401 aaKnown RBP18.05■□□□□ 0.48
CACNA1A-220ENST00000635988 EMILIN1Q9Y6C2 1016 aa18.05■□□□□ 0.48
CACNA1A-220ENST00000635988 PHF14O94880 888 aa18.05■□□□□ 0.48
CACNA1A-220ENST00000635988 BRD1O95696 1058 aa18.05■□□□□ 0.48
CACNA1A-220ENST00000635988 INTS4Q96HW7 963 aaKnown RBP18.05■□□□□ 0.48
CACNA1A-220ENST00000635988 MCCP23508 829 aa18.04■□□□□ 0.48
CACNA1A-220ENST00000635988 TMX3Q96JJ7 454 aa18.04■□□□□ 0.48
CACNA1A-220ENST00000635988 ALKQ9UM73 1620 aa18.04■□□□□ 0.48
CACNA1A-220ENST00000635988 NPM1P06748 294 aaKnown RBP eCLIP18.04■□□□□ 0.48
CACNA1A-220ENST00000635988 FBLN1P23142 703 aa18.04■□□□□ 0.48
CACNA1A-220ENST00000635988 CUL4AQ13619 759 aa18.04■□□□□ 0.48
CACNA1A-220ENST00000635988 TSPY26PQ9H489 355 aa18.04■□□□□ 0.48
CACNA1A-220ENST00000635988 KIAA0232Q92628 1395 aa18.04■□□□□ 0.48
CACNA1A-220ENST00000635988 RGS12O14924 1447 aa18.04■□□□□ 0.48
CACNA1A-220ENST00000635988 DLC1Q96QB1 1528 aa18.04■□□□□ 0.48
CACNA1A-220ENST00000635988 NEK4P51957 841 aa18.03■□□□□ 0.48
CACNA1A-220ENST00000635988 DLG5Q8TDM6 1919 aa18.03■□□□□ 0.48
CACNA1A-220ENST00000635988 SMARCA5O60264 1052 aaPredicted RBP18.02■□□□□ 0.48
CACNA1A-220ENST00000635988 ANAPC15P60006 121 aa18.02■□□□□ 0.48
CACNA1A-220ENST00000635988 KIAA2012Q0VF49 1180 aa18.02■□□□□ 0.47
CACNA1A-220ENST00000635988 MSH6P52701 1360 aa18.01■□□□□ 0.47
CACNA1A-220ENST00000635988 PTMAP06454 111 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-220ENST00000635988 MYO5BQ9ULV0 1848 aa18.01■□□□□ 0.47
CACNA1A-220ENST00000635988 FAM83GA6ND36 823 aa18.01■□□□□ 0.47
CACNA1A-220ENST00000635988 PDE1AP54750 535 aa18.01■□□□□ 0.47
CACNA1A-220ENST00000635988 FAM184AQ8NB25 1140 aa18.01■□□□□ 0.47
CACNA1A-220ENST00000635988 NSFL1CQ9UNZ2 370 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-220ENST00000635988 DIP2CQ9Y2E4 1556 aa18■□□□□ 0.47
CACNA1A-220ENST00000635988 CHL1O00533 1208 aa18■□□□□ 0.47
CACNA1A-220ENST00000635988 UVSSAQ2YD98 709 aa18■□□□□ 0.47
CACNA1A-220ENST00000635988 NEO1Q92859 1461 aa17.99■□□□□ 0.47
CACNA1A-220ENST00000635988 APBB1O00213 710 aa17.99■□□□□ 0.47
CACNA1A-220ENST00000635988 COG3Q96JB2 828 aa17.99■□□□□ 0.47
CACNA1A-220ENST00000635988 MEIS3Q99687 375 aa17.99■□□□□ 0.47
CACNA1A-220ENST00000635988 PREX1Q8TCU6 1659 aa17.99■□□□□ 0.47
CACNA1A-220ENST00000635988 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
CACNA1A-220ENST00000635988 RNF214Q8ND24 703 aa17.98■□□□□ 0.47
CACNA1A-220ENST00000635988 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
CACNA1A-220ENST00000635988 IL17RAQ96F46 866 aa17.98■□□□□ 0.47
CACNA1A-220ENST00000635988 ESYT1Q9BSJ8 1104 aa17.98■□□□□ 0.47
CACNA1A-220ENST00000635988 SENP3Q9H4L4 574 aaPredicted RBP17.98■□□□□ 0.47
CACNA1A-220ENST00000635988 NME9Q86XW9 330 aa17.97■□□□□ 0.47
CACNA1A-220ENST00000635988 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-220ENST00000635988 SMAP1Q8IYB5 467 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-220ENST00000635988 CCT4P50991 539 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-220ENST00000635988 FOXD4L5Q5VV16 416 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-220ENST00000635988 KLHL34Q8N239 644 aa17.96■□□□□ 0.47
CACNA1A-220ENST00000635988 FOXD4L4Q8WXT5 416 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-220ENST00000635988 PRIMPOLQ96LW4 560 aa17.96■□□□□ 0.47
CACNA1A-220ENST00000635988 WDR33Q9C0J8 1336 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-220ENST00000635988 HMGN5P82970 282 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-220ENST00000635988 LETM1O95202 739 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-220ENST00000635988 CHAMP1Q96JM3 812 aa17.95■□□□□ 0.46
CACNA1A-220ENST00000635988 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.95■□□□□ 0.46
CACNA1A-220ENST00000635988 MYRIPQ8NFW9 859 aa17.94■□□□□ 0.46
CACNA1A-220ENST00000635988 RAPGEF3O95398 923 aa17.93■□□□□ 0.46
CACNA1A-220ENST00000635988 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.93■□□□□ 0.46
CACNA1A-220ENST00000635988 WASLO00401 505 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-220ENST00000635988 WAPLQ7Z5K2 1190 aa17.93■□□□□ 0.46
CACNA1A-220ENST00000635988 SRCIN1Q9C0H9 1055 aa17.93■□□□□ 0.46
CACNA1A-220ENST00000635988 SALL3Q9BXA9 1300 aa17.92■□□□□ 0.46
CACNA1A-220ENST00000635988 GNAI2P04899 355 aa17.92■□□□□ 0.46
CACNA1A-220ENST00000635988 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
CACNA1A-220ENST00000635988 RRS1Q15050 365 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-220ENST00000635988 DNTTIP2Q5QJE6 756 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-220ENST00000635988 TMEM87AQ8NBN3 555 aa17.92■□□□□ 0.46
CACNA1A-220ENST00000635988 PIBF1Q8WXW3 757 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms