RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 SHANK3Q9BYB0 1731 aa20.85■□□□□ 0.93
CLN6-211ENST00000635754 PKD1L3Q7Z443 1732 aa20.84■□□□□ 0.93
CLN6-211ENST00000635754 MARCH10Q8NA82 808 aaPredicted RBP20.82■□□□□ 0.92
CLN6-211ENST00000635754 ZCRB1Q8TBF4 217 aaKnown RBP20.82■□□□□ 0.92
CLN6-211ENST00000635754 PLEKHG2Q9H7P9 1386 aa20.81■□□□□ 0.92
CLN6-211ENST00000635754 SBF2Q86WG5 1849 aa20.8■□□□□ 0.92
CLN6-211ENST00000635754 CCDC125Q86Z20 511 aa20.8■□□□□ 0.92
CLN6-211ENST00000635754 DDX54Q8TDD1 881 aaKnown RBP20.79■□□□□ 0.92
CLN6-211ENST00000635754 MYBBP1AQ9BQG0 1328 aaKnown RBP20.79■□□□□ 0.92
CLN6-211ENST00000635754 KDRP35968 1356 aa20.79■□□□□ 0.92
CLN6-211ENST00000635754 BCL9O00512 1426 aa20.79■□□□□ 0.92
CLN6-211ENST00000635754 TNS1Q9HBL0 1735 aaKnown RBP20.79■□□□□ 0.92
CLN6-211ENST00000635754 SULT6B1Q6IMI4 303 aa20.78■□□□□ 0.92
CLN6-211ENST00000635754 PRKRIP1Q9H875 184 aaPredicted RBP20.78■□□□□ 0.92
CLN6-211ENST00000635754 PCDH11XQ9BZA7 1347 aa20.78■□□□□ 0.92
CLN6-211ENST00000635754 PCDH11YQ9BZA8 1340 aa20.78■□□□□ 0.92
CLN6-211ENST00000635754 U2SURPO15042 1029 aaKnown RBP20.78■□□□□ 0.92
CLN6-211ENST00000635754 SF3B2Q13435 895 aaKnown RBP20.78■□□□□ 0.92
CLN6-211ENST00000635754 AEBP1Q8IUX7 1158 aa20.78■□□□□ 0.92
CLN6-211ENST00000635754 SPG7Q9UQ90 795 aa20.77■□□□□ 0.91
CLN6-211ENST00000635754 NUDCQ9Y266 331 aa20.77■□□□□ 0.91
CLN6-211ENST00000635754 POTEDQ86YR6 584 aa20.76■□□□□ 0.91
CLN6-211ENST00000635754 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.76■□□□□ 0.91
CLN6-211ENST00000635754 TRIM37O94972 964 aa20.75■□□□□ 0.91
CLN6-211ENST00000635754 HMOX1P09601 288 aa20.75■□□□□ 0.91
CLN6-211ENST00000635754 NHSQ6T4R5 1651 aa20.75■□□□□ 0.91
CLN6-211ENST00000635754 DOT1LQ8TEK3 1739 aa20.74■□□□□ 0.91
CLN6-211ENST00000635754 PLEKHO1Q53GL0 409 aaPredicted RBP20.72■□□□□ 0.91
CLN6-211ENST00000635754 KAT6BQ8WYB5 2073 aa20.72■□□□□ 0.91
CLN6-211ENST00000635754 AMOTQ4VCS5 1084 aa20.71■□□□□ 0.91
CLN6-211ENST00000635754 CYP27B1O15528 508 aa20.7■□□□□ 0.9
CLN6-211ENST00000635754 ANP32CO43423 234 aa20.7■□□□□ 0.9
CLN6-211ENST00000635754 U2AF1L5P0DN76 240 aaPredicted RBP20.7■□□□□ 0.9
CLN6-211ENST00000635754 BAG6P46379 1132 aa20.7■□□□□ 0.9
CLN6-211ENST00000635754 U2AF1Q01081 240 aaKnown RBP eCLIP20.7■□□□□ 0.9
CLN6-211ENST00000635754 ACSBG1Q96GR2 724 aa20.7■□□□□ 0.9
CLN6-211ENST00000635754 BCL11BQ9C0K0 894 aaPredicted RBP20.7■□□□□ 0.9
CLN6-211ENST00000635754 IFNL2Q8IZJ0 200 aa20.69■□□□□ 0.9
CLN6-211ENST00000635754 ZNF530Q6P9A1 599 aaPredicted RBP20.68■□□□□ 0.9
CLN6-211ENST00000635754 APBA3O96018 575 aa20.67■□□□□ 0.9
CLN6-211ENST00000635754 PHKG2P15735 406 aa20.67■□□□□ 0.9
CLN6-211ENST00000635754 TOGARAM1Q9Y4F4 1720 aa20.67■□□□□ 0.9
CLN6-211ENST00000635754 BTAF1O14981 1849 aa20.67■□□□□ 0.9
CLN6-211ENST00000635754 C1orf141Q5JVX7 400 aa20.66■□□□□ 0.9
CLN6-211ENST00000635754 RSPH6AQ9H0K4 717 aa20.66■□□□□ 0.9
CLN6-211ENST00000635754 RGPD3A6NKT7 1758 aaPredicted RBP20.66■□□□□ 0.9
CLN6-211ENST00000635754 RGPD4Q7Z3J3 1758 aa20.66■□□□□ 0.9
CLN6-211ENST00000635754 KCNQ2O43526 872 aa20.65■□□□□ 0.9
CLN6-211ENST00000635754 NKX1-1Q15270 411 aaPredicted RBP20.65■□□□□ 0.9
CLN6-211ENST00000635754 DEFB132Q7Z7B7 95 aa20.65■□□□□ 0.9
CLN6-211ENST00000635754 FCHSD2O94868 740 aa20.64■□□□□ 0.89
CLN6-211ENST00000635754 PRKAR2BP31323 418 aa20.64■□□□□ 0.89
CLN6-211ENST00000635754 PTF1AQ7RTS3 328 aa20.64■□□□□ 0.89
CLN6-211ENST00000635754 SYTL4Q96C24 671 aaPredicted RBP20.64■□□□□ 0.89
CLN6-211ENST00000635754 ITGB4P16144 1822 aa20.64■□□□□ 0.89
CLN6-211ENST00000635754 HSP90AB1P08238 724 aaKnown RBP20.63■□□□□ 0.89
CLN6-211ENST00000635754 PRIM1P49642 420 aaKnown RBP20.63■□□□□ 0.89
CLN6-211ENST00000635754 EN1Q05925 392 aaPredicted RBP20.62■□□□□ 0.89
CLN6-211ENST00000635754 VIRMAQ69YN4 1812 aaKnown RBP20.61■□□□□ 0.89
CLN6-211ENST00000635754 MTHFSDQ2M296 383 aaKnown RBP20.61■□□□□ 0.89
CLN6-211ENST00000635754 AKAP4Q5JQC9 854 aa20.61■□□□□ 0.89
CLN6-211ENST00000635754 DCAF5Q96JK2 942 aa20.61■□□□□ 0.89
CLN6-211ENST00000635754 RREB1Q92766 1687 aa20.6■□□□□ 0.89
CLN6-211ENST00000635754 SCN11AQ9UI33 1791 aa20.6■□□□□ 0.89
CLN6-211ENST00000635754 NEFMP07197 916 aa20.6■□□□□ 0.89
CLN6-211ENST00000635754 WDR43Q15061 677 aaKnown RBP eCLIP20.6■□□□□ 0.89
CLN6-211ENST00000635754 GAS2L2Q8NHY3 880 aa20.6■□□□□ 0.89
CLN6-211ENST00000635754 PNNQ9H307 717 aaKnown RBP20.6■□□□□ 0.89
CLN6-211ENST00000635754 KDM6AO15550 1401 aaPredicted RBP20.59■□□□□ 0.89
CLN6-211ENST00000635754 PLSCR1O15162 318 aa20.59■□□□□ 0.89
CLN6-211ENST00000635754 EZH2Q15910 746 aaKnown RBP20.58■□□□□ 0.88
CLN6-211ENST00000635754 PHACTR3Q96KR7 559 aa20.58■□□□□ 0.88
CLN6-211ENST00000635754 CAMKK2Q96RR4 588 aa20.58■□□□□ 0.88
CLN6-211ENST00000635754 MPRIPQ6WCQ1 1025 aa20.57■□□□□ 0.88
CLN6-211ENST00000635754 ERVV-2B6SEH9 535 aa20.56■□□□□ 0.88
CLN6-211ENST00000635754 TMOD3Q9NYL9 352 aa20.56■□□□□ 0.88
CLN6-211ENST00000635754 NUP188Q5SRE5 1749 aa20.56■□□□□ 0.88
CLN6-211ENST00000635754 MAP3K5Q99683 1374 aa20.56■□□□□ 0.88
CLN6-211ENST00000635754 ADAMTS7Q9UKP4 1686 aa20.55■□□□□ 0.88
CLN6-211ENST00000635754 MAPK8IP3Q9UPT6 1336 aa20.55■□□□□ 0.88
CLN6-211ENST00000635754 LY75O60449 1722 aa20.54■□□□□ 0.88
CLN6-211ENST00000635754 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
CLN6-211ENST00000635754 PPP4R3CPQ6ZMV5 832 aa20.53■□□□□ 0.88
CLN6-211ENST00000635754 PLEKHF1Q96S99 279 aa20.53■□□□□ 0.88
CLN6-211ENST00000635754 CABP4P57796 275 aa20.53■□□□□ 0.88
CLN6-211ENST00000635754 PIGBQ92521 554 aa20.53■□□□□ 0.88
CLN6-211ENST00000635754 MRS2Q9HD23 443 aa20.53■□□□□ 0.88
CLN6-211ENST00000635754 MRC1P22897 1456 aa20.52■□□□□ 0.88
CLN6-211ENST00000635754 DLG5Q8TDM6 1919 aa20.52■□□□□ 0.87
CLN6-211ENST00000635754 RNMTO43148 476 aaKnown RBP20.52■□□□□ 0.87
CLN6-211ENST00000635754 MAPK8IP2Q13387 824 aaPredicted RBP20.52■□□□□ 0.87
CLN6-211ENST00000635754 TXNRD1Q16881 649 aa20.52■□□□□ 0.87
CLN6-211ENST00000635754 CCDC184Q52MB2 194 aa20.52■□□□□ 0.87
CLN6-211ENST00000635754 ADAMTS8Q9UP79 889 aa20.51■□□□□ 0.87
CLN6-211ENST00000635754 SMARCC1Q92922 1105 aaPredicted RBP20.5■□□□□ 0.87
CLN6-211ENST00000635754 LGR6Q9HBX8 967 aa20.5■□□□□ 0.87
CLN6-211ENST00000635754 PALLDQ8WX93 1383 aa20.49■□□□□ 0.87
CLN6-211ENST00000635754 PROM2Q8N271 834 aa20.48■□□□□ 0.87
CLN6-211ENST00000635754 NFATC2IPQ8NCF5 419 aa20.48■□□□□ 0.87
CLN6-211ENST00000635754 RTF1Q92541 710 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms