RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 GSK3AP49840 483 aa5.34□□□□□ -1.55
PSPC1-208ENST00000635562 RNF144AP50876 292 aaPredicted RBP5.34□□□□□ -1.55
PSPC1-208ENST00000635562 MARSP56192 900 aaKnown RBP5.34□□□□□ -1.55
PSPC1-208ENST00000635562 MCCD1P59942 119 aaPredicted RBP5.34□□□□□ -1.55
PSPC1-208ENST00000635562 RNFT1Q5M7Z0 435 aa5.34□□□□□ -1.55
PSPC1-208ENST00000635562 KCTD17Q8N5Z5 321 aa5.34□□□□□ -1.55
PSPC1-208ENST00000635562 ZNF395Q9H8N7 513 aaPredicted RBP5.34□□□□□ -1.55
PSPC1-208ENST00000635562 SENP3-EIF4A1A0A087X0R7 540 aa5.33□□□□□ -1.56
PSPC1-208ENST00000635562 LILRA1O75019 489 aa5.33□□□□□ -1.56
PSPC1-208ENST00000635562 RFC5P40937 340 aa5.33□□□□□ -1.56
PSPC1-208ENST00000635562 TMEM259Q4ZIN3 620 aa5.33□□□□□ -1.56
PSPC1-208ENST00000635562 RNF20Q5VTR2 975 aa5.33□□□□□ -1.56
PSPC1-208ENST00000635562 FOXD4L5Q5VV16 416 aaPredicted RBP5.33□□□□□ -1.56
PSPC1-208ENST00000635562 TMPRSS4Q9NRS4 437 aa5.33□□□□□ -1.56
PSPC1-208ENST00000635562 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
PSPC1-208ENST00000635562 ZBBXA8MT70 800 aa5.32□□□□□ -1.56
PSPC1-208ENST00000635562 ATP5J2-PTCD1G3V325 749 aa5.32□□□□□ -1.56
PSPC1-208ENST00000635562 ARHGEF15O94989 841 aa5.32□□□□□ -1.56
PSPC1-208ENST00000635562 RAB15P59190 212 aa5.32□□□□□ -1.56
PSPC1-208ENST00000635562 FLIIQ13045 1269 aa5.32□□□□□ -1.56
PSPC1-208ENST00000635562 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
PSPC1-208ENST00000635562 HMX1Q9NP08 348 aaPredicted RBP5.32□□□□□ -1.56
PSPC1-208ENST00000635562 ZNF330Q9Y3S2 320 aaPredicted RBP5.32□□□□□ -1.56
PSPC1-208ENST00000635562 H7C1W4 665 aa5.31□□□□□ -1.56
PSPC1-208ENST00000635562 ADAMTS2O95450 1211 aa5.31□□□□□ -1.56
PSPC1-208ENST00000635562 MCM6Q14566 821 aa5.31□□□□□ -1.56
PSPC1-208ENST00000635562 SUZ12Q15022 739 aaKnown RBP5.31□□□□□ -1.56
PSPC1-208ENST00000635562 TRIM22Q8IYM9 498 aa5.31□□□□□ -1.56
PSPC1-208ENST00000635562 ZMYND15Q9H091 742 aa5.31□□□□□ -1.56
PSPC1-208ENST00000635562 MBIPQ9NS73 344 aa5.31□□□□□ -1.56
PSPC1-208ENST00000635562 LRRC4BQ9NT99 713 aa5.31□□□□□ -1.56
PSPC1-208ENST00000635562 PHF20L1A8MW92 1017 aa5.3□□□□□ -1.56
PSPC1-208ENST00000635562 SOCS7O14512 581 aa5.3□□□□□ -1.56
PSPC1-208ENST00000635562 WDR44Q5JSH3 913 aa5.3□□□□□ -1.56
PSPC1-208ENST00000635562 CYP2U1Q7Z449 544 aa5.3□□□□□ -1.56
PSPC1-208ENST00000635562 NSFL1CQ9UNZ2 370 aaKnown RBP5.3□□□□□ -1.56
PSPC1-208ENST00000635562 APBB1O00213 710 aa5.29□□□□□ -1.56
PSPC1-208ENST00000635562 IRS1P35568 1242 aa5.29□□□□□ -1.56
PSPC1-208ENST00000635562 ADD1P35611 737 aaKnown RBP5.29□□□□□ -1.56
PSPC1-208ENST00000635562 ERVK-9P63128 1117 aa5.29□□□□□ -1.56
PSPC1-208ENST00000635562 CC2D2BQ6DHV5 1058 aa5.29□□□□□ -1.56
PSPC1-208ENST00000635562 PODNQ7Z5L7 613 aa5.29□□□□□ -1.56
PSPC1-208ENST00000635562 KDF1Q8NAX2 398 aaPredicted RBP5.29□□□□□ -1.56
PSPC1-208ENST00000635562 BANK1Q8NDB2 785 aa5.29□□□□□ -1.56
PSPC1-208ENST00000635562 EPS8L1Q8TE68 723 aa5.29□□□□□ -1.56
PSPC1-208ENST00000635562 TRERF1Q96PN7 1200 aa5.29□□□□□ -1.56
PSPC1-208ENST00000635562 ESF1Q9H501 851 aaKnown RBP5.29□□□□□ -1.56
PSPC1-208ENST00000635562 CYLDQ9NQC7 956 aa5.29□□□□□ -1.56
PSPC1-208ENST00000635562 DYRK1BQ9Y463 629 aa5.29□□□□□ -1.56
PSPC1-208ENST00000635562 PRICKLE2Q7Z3G6 844 aa5.28□□□□□ -1.56
PSPC1-208ENST00000635562 ZNF837Q96EG3 531 aaPredicted RBP5.28□□□□□ -1.56
PSPC1-208ENST00000635562 NLRP3Q96P20 1036 aa5.28□□□□□ -1.56
PSPC1-208ENST00000635562 PCDHB9Q9Y5E1 797 aa5.28□□□□□ -1.56
PSPC1-208ENST00000635562 A6NJR5 290 aa5.27□□□□□ -1.57
PSPC1-208ENST00000635562 MEN1O00255 615 aa5.27□□□□□ -1.57
PSPC1-208ENST00000635562 CELA2BP08218 269 aaPredicted RBP5.27□□□□□ -1.57
PSPC1-208ENST00000635562 CLN3Q13286 438 aa5.27□□□□□ -1.57
PSPC1-208ENST00000635562 GAS6Q14393 721 aa5.27□□□□□ -1.57
PSPC1-208ENST00000635562 SLC27A3Q5K4L6 730 aa5.27□□□□□ -1.57
PSPC1-208ENST00000635562 LYPD4Q6UWN0 246 aa5.27□□□□□ -1.57
PSPC1-208ENST00000635562 WHAMMQ8TF30 809 aa5.27□□□□□ -1.57
PSPC1-208ENST00000635562 TRIM34Q9BYJ4 488 aa5.27□□□□□ -1.57
PSPC1-208ENST00000635562 TTBK1Q5TCY1 1321 aaPredicted RBP5.26□□□□□ -1.57
PSPC1-208ENST00000635562 A0A1W2PRU2 124 aa5.26□□□□□ -1.57
PSPC1-208ENST00000635562 SPATA31C2B4DYI2 1134 aa5.26□□□□□ -1.57
PSPC1-208ENST00000635562 BCRP11274 1271 aa5.26□□□□□ -1.57
PSPC1-208ENST00000635562 GPAT2Q6NUI2 795 aa5.26□□□□□ -1.57
PSPC1-208ENST00000635562 RIPOR1Q6ZS17 1223 aa5.26□□□□□ -1.57
PSPC1-208ENST00000635562 BEND7Q8N7W2 519 aaPredicted RBP5.26□□□□□ -1.57
PSPC1-208ENST00000635562 GIGYF1O75420 1035 aaPredicted RBP5.25□□□□□ -1.57
PSPC1-208ENST00000635562 FBXO45P0C2W1 286 aa5.25□□□□□ -1.57
PSPC1-208ENST00000635562 NR1H3Q13133 447 aa5.25□□□□□ -1.57
PSPC1-208ENST00000635562 SNRKQ9NRH2 765 aa5.25□□□□□ -1.57
PSPC1-208ENST00000635562 CUEDC1Q9NWM3 386 aaPredicted RBP5.25□□□□□ -1.57
PSPC1-208ENST00000635562 IGF1RP08069 1367 aa5.25□□□□□ -1.57
PSPC1-208ENST00000635562 RHOQP17081 205 aa5.24□□□□□ -1.57
PSPC1-208ENST00000635562 MAP2K3P46734 347 aa5.24□□□□□ -1.57
PSPC1-208ENST00000635562 LBRQ14739 615 aaKnown RBP5.24□□□□□ -1.57
PSPC1-208ENST00000635562 NBPF10Q6P3W6 841 aaKnown RBP5.24□□□□□ -1.57
PSPC1-208ENST00000635562 TAS1R3Q7RTX0 852 aa5.24□□□□□ -1.57
PSPC1-208ENST00000635562 ALYREFQ86V81 257 aaKnown RBP5.24□□□□□ -1.57
PSPC1-208ENST00000635562 FNBP4Q8N3X1 1017 aaPredicted RBP5.24□□□□□ -1.57
PSPC1-208ENST00000635562 NBPF15Q8N660 670 aa5.24□□□□□ -1.57
PSPC1-208ENST00000635562 MTMR14Q8NCE2 650 aa5.24□□□□□ -1.57
PSPC1-208ENST00000635562 NEDD1Q8NHV4 660 aa5.24□□□□□ -1.57
PSPC1-208ENST00000635562 CLUAP1Q96AJ1 413 aa5.24□□□□□ -1.57
PSPC1-208ENST00000635562 GJD4Q96KN9 370 aaPredicted RBP5.24□□□□□ -1.57
PSPC1-208ENST00000635562 GRIP2Q9C0E4 1043 aa5.24□□□□□ -1.57
PSPC1-208ENST00000635562 PHF24Q9UPV7 400 aa5.24□□□□□ -1.57
PSPC1-208ENST00000635562 MYCP01106 439 aaPredicted RBP5.23□□□□□ -1.57
PSPC1-208ENST00000635562 GNRH1P01148 92 aa5.23□□□□□ -1.57
PSPC1-208ENST00000635562 F11P03951 625 aa5.23□□□□□ -1.57
PSPC1-208ENST00000635562 MX2P20592 715 aa5.23□□□□□ -1.57
PSPC1-208ENST00000635562 GTF2E1P29083 439 aaPredicted RBP5.23□□□□□ -1.57
PSPC1-208ENST00000635562 DBN1Q16643 649 aa5.23□□□□□ -1.57
PSPC1-208ENST00000635562 GAS2L1Q99501 681 aaPredicted RBP5.23□□□□□ -1.57
PSPC1-208ENST00000635562 CFHR5Q9BXR6 569 aa5.23□□□□□ -1.57
PSPC1-208ENST00000635562 NUCKS1Q9H1E3 243 aaKnown RBP5.23□□□□□ -1.57
PSPC1-208ENST00000635562 TIMMDC1Q9NPL8 285 aa5.23□□□□□ -1.57
PSPC1-208ENST00000635562 NDUFB9Q9Y6M9 179 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms