RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
LINC00254-202ENST00000633813 ADAMTS19Q8TE59 1207 aa9.81□□□□□ -0.84
LINC00254-202ENST00000633813 PURBQ96QR8 312 aaKnown RBP9.81□□□□□ -0.84
LINC00254-202ENST00000633813 CHIC2Q9UKJ5 165 aa9.81□□□□□ -0.84
LINC00254-202ENST00000633813 C11orf95C9JLR9 678 aaPredicted RBP9.8□□□□□ -0.84
LINC00254-202ENST00000633813 SKIP12755 728 aa9.8□□□□□ -0.84
LINC00254-202ENST00000633813 CYP2U1Q7Z449 544 aa9.8□□□□□ -0.84
LINC00254-202ENST00000633813 TRIM47Q96LD4 638 aa9.8□□□□□ -0.84
LINC00254-202ENST00000633813 ZFP42Q96MM3 310 aa9.8□□□□□ -0.84
LINC00254-202ENST00000633813 ATP5J2-PTCD1G3V325 749 aa9.79□□□□□ -0.84
LINC00254-202ENST00000633813 LZTS3O60299 673 aaPredicted RBP9.79□□□□□ -0.84
LINC00254-202ENST00000633813 ADD1P35611 737 aaKnown RBP9.79□□□□□ -0.84
LINC00254-202ENST00000633813 RELBQ01201 579 aa9.79□□□□□ -0.84
LINC00254-202ENST00000633813 OXLD1Q5BKU9 147 aa9.79□□□□□ -0.84
LINC00254-202ENST00000633813 PIK3CDO00329 1044 aa9.78□□□□□ -0.84
LINC00254-202ENST00000633813 CDCA7Q9BWT1 371 aaPredicted RBP9.78□□□□□ -0.84
LINC00254-202ENST00000633813 ZNF777Q9ULD5 760 aaPredicted RBP9.78□□□□□ -0.84
LINC00254-202ENST00000633813 CECR2Q9BXF3 1484 aa9.78□□□□□ -0.84
LINC00254-202ENST00000633813 SUPT5HO00267 1087 aaKnown RBP9.77□□□□□ -0.85
LINC00254-202ENST00000633813 PTGIRP43119 386 aa9.77□□□□□ -0.85
LINC00254-202ENST00000633813 SCTRP47872 440 aa9.77□□□□□ -0.85
LINC00254-202ENST00000633813 EML3Q32P44 896 aa9.77□□□□□ -0.85
LINC00254-202ENST00000633813 TSGA10IPQ3SY00 556 aa9.77□□□□□ -0.85
LINC00254-202ENST00000633813 AGBL1Q96MI9 1066 aa9.77□□□□□ -0.85
LINC00254-202ENST00000633813 SPINT1O43278 529 aa9.76□□□□□ -0.85
LINC00254-202ENST00000633813 OSBPL3Q9H4L5 887 aa9.76□□□□□ -0.85
LINC00254-202ENST00000633813 ATP9BO43861 1147 aa9.75□□□□□ -0.85
LINC00254-202ENST00000633813 UCN2Q96RP3 112 aa9.75□□□□□ -0.85
LINC00254-202ENST00000633813 RSF1Q96T23 1441 aaPredicted RBP9.74□□□□□ -0.85
LINC00254-202ENST00000633813 USP17L5A8MUK1 530 aa9.74□□□□□ -0.85
LINC00254-202ENST00000633813 POTECB2RU33 542 aa9.74□□□□□ -0.85
LINC00254-202ENST00000633813 GNRH1P01148 92 aa9.74□□□□□ -0.85
LINC00254-202ENST00000633813 ZNF395Q9H8N7 513 aaPredicted RBP9.74□□□□□ -0.85
LINC00254-202ENST00000633813 BAZ1AQ9NRL2 1556 aaPredicted RBP9.73□□□□□ -0.85
LINC00254-202ENST00000633813 TBC1D9Q6ZT07 1266 aa9.73□□□□□ -0.85
LINC00254-202ENST00000633813 POLMQ9NP87 494 aaPredicted RBP9.73□□□□□ -0.85
LINC00254-202ENST00000633813 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
LINC00254-202ENST00000633813 TTLL8A6PVC2 850 aa9.72□□□□□ -0.85
LINC00254-202ENST00000633813 MAN1A2O60476 641 aa9.72□□□□□ -0.85
LINC00254-202ENST00000633813 NCOA4Q13772 614 aa9.72□□□□□ -0.85
LINC00254-202ENST00000633813 PLEKHM2Q8IWE5 1019 aa9.72□□□□□ -0.85
LINC00254-202ENST00000633813 KDF1Q8NAX2 398 aaPredicted RBP9.72□□□□□ -0.85
LINC00254-202ENST00000633813 INSM2Q96T92 566 aaPredicted RBP9.72□□□□□ -0.85
LINC00254-202ENST00000633813 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
LINC00254-202ENST00000633813 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
LINC00254-202ENST00000633813 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
LINC00254-202ENST00000633813 SNRPBP14678 240 aaKnown RBP9.71□□□□□ -0.86
LINC00254-202ENST00000633813 ESCO1Q5FWF5 840 aa9.71□□□□□ -0.86
LINC00254-202ENST00000633813 USP17L2Q6R6M4 530 aa9.71□□□□□ -0.86
LINC00254-202ENST00000633813 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
LINC00254-202ENST00000633813 NLRP3Q96P20 1036 aa9.71□□□□□ -0.86
LINC00254-202ENST00000633813 A0A1W2PRU2 124 aa9.7□□□□□ -0.86
LINC00254-202ENST00000633813 MEN1O00255 615 aa9.7□□□□□ -0.86
LINC00254-202ENST00000633813 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
LINC00254-202ENST00000633813 DEPDC4Q8N2C3 294 aa9.7□□□□□ -0.86
LINC00254-202ENST00000633813 PPP1R12CQ9BZL4 782 aa9.7□□□□□ -0.86
LINC00254-202ENST00000633813 ARHGEF10LQ9HCE6 1279 aa9.7□□□□□ -0.86
LINC00254-202ENST00000633813 TFIP11Q9UBB9 837 aaKnown RBP9.7□□□□□ -0.86
LINC00254-202ENST00000633813 MROH2BQ7Z745 1585 aa9.7□□□□□ -0.86
LINC00254-202ENST00000633813 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
LINC00254-202ENST00000633813 GPC1P35052 558 aa9.69□□□□□ -0.86
LINC00254-202ENST00000633813 CLN3Q13286 438 aa9.69□□□□□ -0.86
LINC00254-202ENST00000633813 CTSOP43234 321 aaPredicted RBP9.68□□□□□ -0.86
LINC00254-202ENST00000633813 ATP1A2P50993 1020 aa9.68□□□□□ -0.86
LINC00254-202ENST00000633813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.68□□□□□ -0.86
LINC00254-202ENST00000633813 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
LINC00254-202ENST00000633813 GTF2IP78347 998 aa9.67□□□□□ -0.86
LINC00254-202ENST00000633813 PSME1Q06323 249 aa9.67□□□□□ -0.86
LINC00254-202ENST00000633813 ESYT1Q9BSJ8 1104 aa9.67□□□□□ -0.86
LINC00254-202ENST00000633813 RAB6BQ9NRW1 208 aa9.67□□□□□ -0.86
LINC00254-202ENST00000633813 RNF144AP50876 292 aaPredicted RBP9.66□□□□□ -0.86
LINC00254-202ENST00000633813 SLC27A3Q5K4L6 730 aa9.66□□□□□ -0.86
LINC00254-202ENST00000633813 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
LINC00254-202ENST00000633813 CCDC97Q96F63 343 aaPredicted RBP9.66□□□□□ -0.86
LINC00254-202ENST00000633813 DNMT3LQ9UJW3 386 aa9.66□□□□□ -0.86
LINC00254-202ENST00000633813 SMARCA4P51532 1647 aa9.66□□□□□ -0.86
LINC00254-202ENST00000633813 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
LINC00254-202ENST00000633813 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
LINC00254-202ENST00000633813 RNF217Q8TC41 542 aa9.65□□□□□ -0.86
LINC00254-202ENST00000633813 MKRN1Q9UHC7 482 aaKnown RBP9.65□□□□□ -0.86
LINC00254-202ENST00000633813 SOBPA7XYQ1 873 aa9.64□□□□□ -0.87
LINC00254-202ENST00000633813 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
LINC00254-202ENST00000633813 LMOD1P29536 600 aaPredicted RBP9.64□□□□□ -0.87
LINC00254-202ENST00000633813 GDF10P55107 478 aa9.64□□□□□ -0.87
LINC00254-202ENST00000633813 LYSMD3Q7Z3D4 306 aa9.64□□□□□ -0.87
LINC00254-202ENST00000633813 XAGE2Q96GT9 111 aa9.64□□□□□ -0.87
LINC00254-202ENST00000633813 ETNK1Q9HBU6 452 aa9.64□□□□□ -0.87
LINC00254-202ENST00000633813 SERPINA10Q9UK55 444 aa9.64□□□□□ -0.87
LINC00254-202ENST00000633813 PCDHGA11Q9Y5H2 935 aa9.64□□□□□ -0.87
LINC00254-202ENST00000633813 WASLO00401 505 aaPredicted RBP9.63□□□□□ -0.87
LINC00254-202ENST00000633813 IL2RAP01589 272 aa9.63□□□□□ -0.87
LINC00254-202ENST00000633813 RBM19Q9Y4C8 960 aaKnown RBP9.63□□□□□ -0.87
LINC00254-202ENST00000633813 ARID3CA6NKF2 412 aa9.62□□□□□ -0.87
LINC00254-202ENST00000633813 INHAP05111 366 aa9.62□□□□□ -0.87
LINC00254-202ENST00000633813 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
LINC00254-202ENST00000633813 BACH1O14867 736 aa9.61□□□□□ -0.87
LINC00254-202ENST00000633813 SCNN1DP51172 638 aa9.61□□□□□ -0.87
LINC00254-202ENST00000633813 CENPCQ03188 943 aa9.61□□□□□ -0.87
LINC00254-202ENST00000633813 LARGE2Q8N3Y3 721 aa9.61□□□□□ -0.87
LINC00254-202ENST00000633813 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms