RNA–Protein interactions for RNA: ENST00000632790.1

LINC01002-220, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5 BASIC

Gene LINC01002, Length 449 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-220ENST00000632790 PCDH11XQ9BZA7 1347 aa20.36■□□□□ 0.85
LINC01002-220ENST00000632790 PCDH11YQ9BZA8 1340 aa20.36■□□□□ 0.85
LINC01002-220ENST00000632790 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
LINC01002-220ENST00000632790 TNNT2P45379 298 aaPredicted RBP20.35■□□□□ 0.85
LINC01002-220ENST00000632790 NBPF14Q5TI25 921 aa20.35■□□□□ 0.85
LINC01002-220ENST00000632790 MEGF6O75095 1541 aa20.35■□□□□ 0.85
LINC01002-220ENST00000632790 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
LINC01002-220ENST00000632790 RREB1Q92766 1687 aa20.34■□□□□ 0.85
LINC01002-220ENST00000632790 EZH2Q15910 746 aaKnown RBP20.33■□□□□ 0.85
LINC01002-220ENST00000632790 DDX54Q8TDD1 881 aaKnown RBP20.33■□□□□ 0.85
LINC01002-220ENST00000632790 EIF4A2Q14240 407 aaKnown RBP20.32■□□□□ 0.84
LINC01002-220ENST00000632790 EYA1Q99502 592 aa20.32■□□□□ 0.84
LINC01002-220ENST00000632790 IGSF1Q8N6C5 1336 aa20.31■□□□□ 0.84
LINC01002-220ENST00000632790 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
LINC01002-220ENST00000632790 PKD1L3Q7Z443 1732 aa20.3■□□□□ 0.84
LINC01002-220ENST00000632790 USHBP1Q8N6Y0 703 aa20.29■□□□□ 0.84
LINC01002-220ENST00000632790 SHANK3Q9BYB0 1731 aa20.28■□□□□ 0.84
LINC01002-220ENST00000632790 NUP188Q5SRE5 1749 aa20.27■□□□□ 0.84
LINC01002-220ENST00000632790 AMOTQ4VCS5 1084 aa20.27■□□□□ 0.84
LINC01002-220ENST00000632790 CC2D1BQ5T0F9 858 aaKnown RBP20.26■□□□□ 0.83
LINC01002-220ENST00000632790 HSP90AB1P08238 724 aaKnown RBP20.25■□□□□ 0.83
LINC01002-220ENST00000632790 MTHFSP49914 203 aa20.25■□□□□ 0.83
LINC01002-220ENST00000632790 NKX1-1Q15270 411 aaPredicted RBP20.25■□□□□ 0.83
LINC01002-220ENST00000632790 SLC27A3Q5K4L6 730 aa20.25■□□□□ 0.83
LINC01002-220ENST00000632790 BTAF1O14981 1849 aa20.25■□□□□ 0.83
LINC01002-220ENST00000632790 KCNQ2O43526 872 aa20.24■□□□□ 0.83
LINC01002-220ENST00000632790 IFNL2Q8IZJ0 200 aa20.24■□□□□ 0.83
LINC01002-220ENST00000632790 ACSBG1Q96GR2 724 aa20.24■□□□□ 0.83
LINC01002-220ENST00000632790 KDRP35968 1356 aa20.23■□□□□ 0.83
LINC01002-220ENST00000632790 TXNRD1Q16881 649 aa20.23■□□□□ 0.83
LINC01002-220ENST00000632790 PLEKHO1Q53GL0 409 aaPredicted RBP20.23■□□□□ 0.83
LINC01002-220ENST00000632790 DOT1LQ8TEK3 1739 aa20.22■□□□□ 0.83
LINC01002-220ENST00000632790 IL13P35225 146 aa20.22■□□□□ 0.83
LINC01002-220ENST00000632790 CFAP53Q96M91 514 aa20.22■□□□□ 0.83
LINC01002-220ENST00000632790 DIAPH1O60610 1272 aaKnown RBP20.21■□□□□ 0.83
LINC01002-220ENST00000632790 PRIM1P49642 420 aaKnown RBP20.21■□□□□ 0.83
LINC01002-220ENST00000632790 CYP27B1O15528 508 aa20.2■□□□□ 0.82
LINC01002-220ENST00000632790 SYTL4Q96C24 671 aaPredicted RBP20.2■□□□□ 0.82
LINC01002-220ENST00000632790 R3HDM1Q15032 1099 aaKnown RBP20.19■□□□□ 0.82
LINC01002-220ENST00000632790 SMARCC1Q92922 1105 aaPredicted RBP20.19■□□□□ 0.82
LINC01002-220ENST00000632790 STK32BQ9NY57 414 aa20.19■□□□□ 0.82
LINC01002-220ENST00000632790 LRP5O75197 1615 aa20.19■□□□□ 0.82
LINC01002-220ENST00000632790 PTF1AQ7RTS3 328 aa20.18■□□□□ 0.82
LINC01002-220ENST00000632790 PHKG2P15735 406 aa20.17■□□□□ 0.82
LINC01002-220ENST00000632790 SULT6B1Q6IMI4 303 aa20.17■□□□□ 0.82
LINC01002-220ENST00000632790 PROM2Q8N271 834 aa20.17■□□□□ 0.82
LINC01002-220ENST00000632790 C1orf141Q5JVX7 400 aa20.16■□□□□ 0.82
LINC01002-220ENST00000632790 DCAF5Q96JK2 942 aa20.16■□□□□ 0.82
LINC01002-220ENST00000632790 NUDCQ9Y266 331 aa20.16■□□□□ 0.82
LINC01002-220ENST00000632790 PSDA5PKW4 1024 aaPredicted RBP20.15■□□□□ 0.82
LINC01002-220ENST00000632790 ERVV-2B6SEH9 535 aa20.15■□□□□ 0.82
LINC01002-220ENST00000632790 LY75O60449 1722 aa20.14■□□□□ 0.81
LINC01002-220ENST00000632790 SLC15A2Q16348 729 aa20.14■□□□□ 0.81
LINC01002-220ENST00000632790 TMOD3Q9NYL9 352 aa20.13■□□□□ 0.81
LINC01002-220ENST00000632790 ITGB4P16144 1822 aa20.12■□□□□ 0.81
LINC01002-220ENST00000632790 ZNF530Q6P9A1 599 aaPredicted RBP20.12■□□□□ 0.81
LINC01002-220ENST00000632790 COL3A1P02461 1466 aaPredicted RBP20.11■□□□□ 0.81
LINC01002-220ENST00000632790 MPRIPQ6WCQ1 1025 aa20.11■□□□□ 0.81
LINC01002-220ENST00000632790 PAPPAQ13219 1627 aa20.11■□□□□ 0.81
LINC01002-220ENST00000632790 PPP2R1AP30153 589 aa20.1■□□□□ 0.81
LINC01002-220ENST00000632790 RALBP1Q15311 655 aa20.1■□□□□ 0.81
LINC01002-220ENST00000632790 AKAP4Q5JQC9 854 aa20.1■□□□□ 0.81
LINC01002-220ENST00000632790 CCNL1Q9UK58 526 aaPredicted RBP20.1■□□□□ 0.81
LINC01002-220ENST00000632790 AEBP1Q8IUX7 1158 aa20.09■□□□□ 0.81
LINC01002-220ENST00000632790 SPON1Q9HCB6 807 aa20.09■□□□□ 0.81
LINC01002-220ENST00000632790 TOGARAM1Q9Y4F4 1720 aa20.09■□□□□ 0.81
LINC01002-220ENST00000632790 PALLDQ8WX93 1383 aa20.08■□□□□ 0.81
LINC01002-220ENST00000632790 QSER1Q2KHR3 1735 aa20.08■□□□□ 0.81
LINC01002-220ENST00000632790 PIGBQ92521 554 aa20.08■□□□□ 0.81
LINC01002-220ENST00000632790 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.81
LINC01002-220ENST00000632790 SLC16A10Q8TF71 515 aa20.07■□□□□ 0.8
LINC01002-220ENST00000632790 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
LINC01002-220ENST00000632790 GAS2L2Q8NHY3 880 aa20.06■□□□□ 0.8
LINC01002-220ENST00000632790 LRRC4BQ9NT99 713 aa20.06■□□□□ 0.8
LINC01002-220ENST00000632790 FLAD1Q8NFF5 587 aa20.05■□□□□ 0.8
LINC01002-220ENST00000632790 AKT1S1Q96B36 256 aa20.05■□□□□ 0.8
LINC01002-220ENST00000632790 CASZ1Q86V15 1759 aa20.05■□□□□ 0.8
LINC01002-220ENST00000632790 CABP4P57796 275 aa20.04■□□□□ 0.8
LINC01002-220ENST00000632790 CNGB1Q14028 1251 aaPredicted RBP20.04■□□□□ 0.8
LINC01002-220ENST00000632790 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
LINC01002-220ENST00000632790 ZNF831Q5JPB2 1677 aa20.03■□□□□ 0.8
LINC01002-220ENST00000632790 FCHSD2O94868 740 aa20.03■□□□□ 0.8
LINC01002-220ENST00000632790 HMOX1P09601 288 aa20.03■□□□□ 0.8
LINC01002-220ENST00000632790 NEFMP07197 916 aa20.02■□□□□ 0.8
LINC01002-220ENST00000632790 MTFR1LQ9H019 292 aa20.02■□□□□ 0.8
LINC01002-220ENST00000632790 TFCP2L1Q9NZI6 479 aa20.02■□□□□ 0.8
LINC01002-220ENST00000632790 SRCAPQ6ZRS2 3230 aa20.02■□□□□ 0.79
LINC01002-220ENST00000632790 KDM6AO15550 1401 aaPredicted RBP20.02■□□□□ 0.79
LINC01002-220ENST00000632790 SCN11AQ9UI33 1791 aa20.01■□□□□ 0.79
LINC01002-220ENST00000632790 C5P01031 1676 aa20.01■□□□□ 0.79
LINC01002-220ENST00000632790 LOC102724428A0A0B4J2F2 783 aa20.01■□□□□ 0.79
LINC01002-220ENST00000632790 SIK1P57059 783 aa20.01■□□□□ 0.79
LINC01002-220ENST00000632790 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
LINC01002-220ENST00000632790 U2AF1L5P0DN76 240 aaPredicted RBP19.99■□□□□ 0.79
LINC01002-220ENST00000632790 U2AF1Q01081 240 aaKnown RBP eCLIP19.99■□□□□ 0.79
LINC01002-220ENST00000632790 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
LINC01002-220ENST00000632790 MRC1P22897 1456 aa19.99■□□□□ 0.79
LINC01002-220ENST00000632790 ZNF827Q17R98 1081 aa19.98■□□□□ 0.79
LINC01002-220ENST00000632790 MTHFSDQ2M296 383 aaKnown RBP19.98■□□□□ 0.79
LINC01002-220ENST00000632790 ATG3Q9NT62 314 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms