RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 CACNA1FO60840 1977 aa10.13□□□□□ -0.79
GPC3-204ENST00000631057 ZBTB7BO15156 539 aaPredicted RBP10.13□□□□□ -0.79
GPC3-204ENST00000631057 CHD1LQ86WJ1 897 aa10.13□□□□□ -0.79
GPC3-204ENST00000631057 TBC1D2Q9BYX2 928 aa10.13□□□□□ -0.79
GPC3-204ENST00000631057 NCKAP5LQ9HCH0 1330 aa10.13□□□□□ -0.79
GPC3-204ENST00000631057 DIP2AQ14689 1571 aa10.12□□□□□ -0.79
GPC3-204ENST00000631057 FER1L4A9Z1Z3 1794 aa10.12□□□□□ -0.79
GPC3-204ENST00000631057 DSG3P32926 999 aa10.12□□□□□ -0.79
GPC3-204ENST00000631057 MFAP1P55081 439 aaKnown RBP10.12□□□□□ -0.79
GPC3-204ENST00000631057 EIF4A2Q14240 407 aaKnown RBP10.12□□□□□ -0.79
GPC3-204ENST00000631057 ANTXR1Q9H6X2 564 aa10.12□□□□□ -0.79
GPC3-204ENST00000631057 U3KPZ7 1027 aaPredicted RBP10.12□□□□□ -0.79
GPC3-204ENST00000631057 ACEP12821 1306 aa10.12□□□□□ -0.79
GPC3-204ENST00000631057 USP31Q70CQ4 1352 aa10.12□□□□□ -0.79
GPC3-204ENST00000631057 SLIT1O75093 1534 aa10.12□□□□□ -0.79
GPC3-204ENST00000631057 RGPD8O14715 1765 aaPredicted RBP10.12□□□□□ -0.79
GPC3-204ENST00000631057 BMP2KLQ5H9B9 411 aa10.11□□□□□ -0.79
GPC3-204ENST00000631057 C8orf58Q8NAV2 365 aa10.11□□□□□ -0.79
GPC3-204ENST00000631057 LNPKQ9C0E8 428 aa10.11□□□□□ -0.79
GPC3-204ENST00000631057 SLKQ9H2G2 1235 aaPredicted RBP10.11□□□□□ -0.79
GPC3-204ENST00000631057 ARHGAP23Q9P227 1491 aa10.1□□□□□ -0.79
GPC3-204ENST00000631057 ARHGEF10O15013 1369 aa10.1□□□□□ -0.79
GPC3-204ENST00000631057 KIAA0232Q92628 1395 aa10.1□□□□□ -0.79
GPC3-204ENST00000631057 TTC21AQ8NDW8 1320 aa10.1□□□□□ -0.79
GPC3-204ENST00000631057 EID1Q9Y6B2 187 aa10.1□□□□□ -0.79
GPC3-204ENST00000631057 SETD1BQ9UPS6 1966 aaKnown RBP10.1□□□□□ -0.79
GPC3-204ENST00000631057 ELL2O00472 640 aaPredicted RBP10.09□□□□□ -0.79
GPC3-204ENST00000631057 EIF5BO60841 1220 aaKnown RBP10.09□□□□□ -0.79
GPC3-204ENST00000631057 SULT6B1Q6IMI4 303 aa10.09□□□□□ -0.79
GPC3-204ENST00000631057 SSH2Q76I76 1423 aa10.09□□□□□ -0.79
GPC3-204ENST00000631057 PTPRUQ92729 1446 aa10.09□□□□□ -0.79
GPC3-204ENST00000631057 ADAMTSL3P82987 1691 aa10.09□□□□□ -0.79
GPC3-204ENST00000631057 FAM83GA6ND36 823 aa10.09□□□□□ -0.79
GPC3-204ENST00000631057 LTKP29376 864 aa10.09□□□□□ -0.79
GPC3-204ENST00000631057 CEBPAP49715 358 aaPredicted RBP10.09□□□□□ -0.79
GPC3-204ENST00000631057 ANKRD45Q5TZF3 282 aa10.09□□□□□ -0.79
GPC3-204ENST00000631057 AEBP1Q8IUX7 1158 aa10.09□□□□□ -0.79
GPC3-204ENST00000631057 HSCBQ8IWL3 235 aa10.09□□□□□ -0.79
GPC3-204ENST00000631057 XRN1Q8IZH2 1706 aaKnown RBP10.08□□□□□ -0.8
GPC3-204ENST00000631057 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
GPC3-204ENST00000631057 CHL1O00533 1208 aa10.08□□□□□ -0.8
GPC3-204ENST00000631057 RBM25P49756 843 aaKnown RBP10.08□□□□□ -0.8
GPC3-204ENST00000631057 INTS3Q68E01 1043 aaKnown RBP10.08□□□□□ -0.8
GPC3-204ENST00000631057 THEMISQ8N1K5 641 aaPredicted RBP10.08□□□□□ -0.8
GPC3-204ENST00000631057 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
GPC3-204ENST00000631057 PTPRCP08575 1304 aa10.07□□□□□ -0.8
GPC3-204ENST00000631057 DCTN1Q14203 1278 aa10.07□□□□□ -0.8
GPC3-204ENST00000631057 CHMP5Q9NZZ3 219 aa10.07□□□□□ -0.8
GPC3-204ENST00000631057 TBX22Q9Y458 520 aa10.07□□□□□ -0.8
GPC3-204ENST00000631057 PIK3C2AO00443 1686 aa10.07□□□□□ -0.8
GPC3-204ENST00000631057 SBNO1A3KN83 1393 aa10.07□□□□□ -0.8
GPC3-204ENST00000631057 FLT4P35916 1363 aa10.07□□□□□ -0.8
GPC3-204ENST00000631057 SIRT2Q8IXJ6 389 aa10.06□□□□□ -0.8
GPC3-204ENST00000631057 SNX21Q969T3 373 aa10.06□□□□□ -0.8
GPC3-204ENST00000631057 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
GPC3-204ENST00000631057 HSP90AB2PQ58FF8 381 aa10.05□□□□□ -0.8
GPC3-204ENST00000631057 AMOTL2Q9Y2J4 779 aa10.05□□□□□ -0.8
GPC3-204ENST00000631057 N4BP2Q86UW6 1770 aaPredicted RBP10.05□□□□□ -0.8
GPC3-204ENST00000631057 RGS12O14924 1447 aa10.05□□□□□ -0.8
GPC3-204ENST00000631057 CRB1P82279 1406 aa10.05□□□□□ -0.8
GPC3-204ENST00000631057 ANKARQ7Z5J8 1434 aa10.05□□□□□ -0.8
GPC3-204ENST00000631057 NCOA3Q9Y6Q9 1424 aa10.05□□□□□ -0.8
GPC3-204ENST00000631057 LRRC37A3O60309 1634 aa10.05□□□□□ -0.8
GPC3-204ENST00000631057 SLC26A8Q96RN1 970 aa10.05□□□□□ -0.8
GPC3-204ENST00000631057 DCTPP1Q9H773 170 aa10.05□□□□□ -0.8
GPC3-204ENST00000631057 MARF1Q9Y4F3 1742 aaKnown RBP10.05□□□□□ -0.8
GPC3-204ENST00000631057 KDRP35968 1356 aa10.04□□□□□ -0.8
GPC3-204ENST00000631057 MAP3K19Q56UN5 1328 aa10.04□□□□□ -0.8
GPC3-204ENST00000631057 ATP10DQ9P241 1426 aa10.04□□□□□ -0.8
GPC3-204ENST00000631057 NUTM2FA1L443 756 aa10.04□□□□□ -0.8
GPC3-204ENST00000631057 CDC45O75419 566 aa10.04□□□□□ -0.8
GPC3-204ENST00000631057 MCM10Q7L590 875 aa10.04□□□□□ -0.8
GPC3-204ENST00000631057 RPAP2Q8IXW5 612 aaPredicted RBP10.04□□□□□ -0.8
GPC3-204ENST00000631057 ANKRD44Q8N8A2 993 aa10.04□□□□□ -0.8
GPC3-204ENST00000631057 NGDNQ8NEJ9 315 aaKnown RBP10.04□□□□□ -0.8
GPC3-204ENST00000631057 FAM208AQ9UK61 1670 aaKnown RBP10.03□□□□□ -0.8
GPC3-204ENST00000631057 CAPN15O75808 1086 aa10.03□□□□□ -0.8
GPC3-204ENST00000631057 TBC1D9Q6ZT07 1266 aa10.03□□□□□ -0.8
GPC3-204ENST00000631057 GAS2L2Q8NHY3 880 aa10.03□□□□□ -0.8
GPC3-204ENST00000631057 RTF1Q92541 710 aaKnown RBP10.03□□□□□ -0.8
GPC3-204ENST00000631057 HTATSF1O43719 755 aaKnown RBP10.02□□□□□ -0.81
GPC3-204ENST00000631057 MCM4P33991 863 aa10.02□□□□□ -0.81
GPC3-204ENST00000631057 AMPHP49418 695 aa10.02□□□□□ -0.81
GPC3-204ENST00000631057 CIZ1Q9ULV3 898 aaPredicted RBP10.02□□□□□ -0.81
GPC3-204ENST00000631057 MSH6P52701 1360 aa10.02□□□□□ -0.81
GPC3-204ENST00000631057 IGSF1Q8N6C5 1336 aa10.02□□□□□ -0.81
GPC3-204ENST00000631057 HSP90AB1P08238 724 aaKnown RBP10.01□□□□□ -0.81
GPC3-204ENST00000631057 L1TD1Q5T7N2 865 aaKnown RBP10.01□□□□□ -0.81
GPC3-204ENST00000631057 PLEKHM2Q8IWE5 1019 aa10.01□□□□□ -0.81
GPC3-204ENST00000631057 IL27Q8NEV9 243 aa10.01□□□□□ -0.81
GPC3-204ENST00000631057 TSPYL4Q9UJ04 414 aa10.01□□□□□ -0.81
GPC3-204ENST00000631057 RTL1A6NKG5 1358 aa10.01□□□□□ -0.81
GPC3-204ENST00000631057 CEP170BQ9Y4F5 1589 aaPredicted RBP10.01□□□□□ -0.81
GPC3-204ENST00000631057 LTN1O94822 1766 aa10.01□□□□□ -0.81
GPC3-204ENST00000631057 SOX12O15370 315 aa10.01□□□□□ -0.81
GPC3-204ENST00000631057 HMMRO75330 724 aa10.01□□□□□ -0.81
GPC3-204ENST00000631057 MTHFSDQ2M296 383 aaKnown RBP10.01□□□□□ -0.81
GPC3-204ENST00000631057 KRT24Q2M2I5 525 aa10.01□□□□□ -0.81
GPC3-204ENST00000631057 TTC22Q5TAA0 569 aa10.01□□□□□ -0.81
GPC3-204ENST00000631057 CEP85Q6P2H3 762 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms