RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 MORC1Q86VD1 984 aa29.25■■■□□ 2.27
RAB28-208ENST00000630951 R3HDM1Q15032 1099 aaKnown RBP29.24■■■□□ 2.27
RAB28-208ENST00000630951 AMER1Q5JTC6 1135 aaPredicted RBP29.24■■■□□ 2.27
RAB28-208ENST00000630951 ACSBG1Q96GR2 724 aa29.24■■■□□ 2.27
RAB28-208ENST00000630951 TATP17735 454 aaPredicted RBP29.23■■■□□ 2.27
RAB28-208ENST00000630951 NBPF14Q5TI25 921 aa29.23■■■□□ 2.27
RAB28-208ENST00000630951 NHSQ6T4R5 1651 aa29.23■■■□□ 2.27
RAB28-208ENST00000630951 PER1O15534 1290 aaPredicted RBP29.21■■■□□ 2.27
RAB28-208ENST00000630951 NUP188Q5SRE5 1749 aa29.21■■■□□ 2.27
RAB28-208ENST00000630951 NCAPD2Q15021 1401 aa29.21■■■□□ 2.27
RAB28-208ENST00000630951 PROM2Q8N271 834 aa29.19■■■□□ 2.26
RAB28-208ENST00000630951 EYA1Q99502 592 aa29.18■■■□□ 2.26
RAB28-208ENST00000630951 EIF4A2Q14240 407 aaKnown RBP29.17■■■□□ 2.26
RAB28-208ENST00000630951 SHANK3Q9BYB0 1731 aa29.17■■■□□ 2.26
RAB28-208ENST00000630951 TXNRD1Q16881 649 aa29.16■■■□□ 2.26
RAB28-208ENST00000630951 PCDH11XQ9BZA7 1347 aa29.15■■■□□ 2.26
RAB28-208ENST00000630951 PCDH11YQ9BZA8 1340 aa29.15■■■□□ 2.26
RAB28-208ENST00000630951 KAT6BQ8WYB5 2073 aa29.14■■■□□ 2.26
RAB28-208ENST00000630951 PRIM1P49642 420 aaKnown RBP29.12■■■□□ 2.25
RAB28-208ENST00000630951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.11■■■□□ 2.251e-6■■□□□ 13.8
RAB28-208ENST00000630951 BTAF1O14981 1849 aa29.11■■■□□ 2.25
RAB28-208ENST00000630951 SYTL4Q96C24 671 aaPredicted RBP29.1■■■□□ 2.25
RAB28-208ENST00000630951 NPC1L1Q9UHC9 1359 aa29.09■■■□□ 2.25
RAB28-208ENST00000630951 IGSF1Q8N6C5 1336 aa29.09■■■□□ 2.25
RAB28-208ENST00000630951 CYP27B1O15528 508 aa29.09■■■□□ 2.25
RAB28-208ENST00000630951 SPG7Q9UQ90 795 aa29.09■■■□□ 2.25
RAB28-208ENST00000630951 PLEKHG2Q9H7P9 1386 aa29.07■■■□□ 2.24
RAB28-208ENST00000630951 CC2D1BQ5T0F9 858 aaKnown RBP29.07■■■□□ 2.24
RAB28-208ENST00000630951 ANO8Q9HCE9 1232 aaPredicted RBP29.07■■■□□ 2.24
RAB28-208ENST00000630951 LRP5O75197 1615 aa29.07■■■□□ 2.24
RAB28-208ENST00000630951 PKD1L3Q7Z443 1732 aa29.07■■■□□ 2.24
RAB28-208ENST00000630951 DOT1LQ8TEK3 1739 aa29.06■■■□□ 2.24
RAB28-208ENST00000630951 NKX1-1Q15270 411 aaPredicted RBP29.03■■■□□ 2.24
RAB28-208ENST00000630951 MTHFSP49914 203 aa29.02■■■□□ 2.24
RAB28-208ENST00000630951 SLC27A3Q5K4L6 730 aa29.02■■■□□ 2.24
RAB28-208ENST00000630951 STK32BQ9NY57 414 aa29.02■■■□□ 2.24
RAB28-208ENST00000630951 IL13P35225 146 aa29■■■□□ 2.23
RAB28-208ENST00000630951 SLC15A2Q16348 729 aa29■■■□□ 2.23
RAB28-208ENST00000630951 IFNL2Q8IZJ0 200 aa28.99■■■□□ 2.23
RAB28-208ENST00000630951 LRRC4BQ9NT99 713 aa28.99■■■□□ 2.23
RAB28-208ENST00000630951 PHKG2P15735 406 aa28.96■■■□□ 2.23
RAB28-208ENST00000630951 MPRIPQ6WCQ1 1025 aa28.95■■■□□ 2.22
RAB28-208ENST00000630951 KDRP35968 1356 aa28.95■■■□□ 2.22
RAB28-208ENST00000630951 PAPPAQ13219 1627 aa28.94■■■□□ 2.22
RAB28-208ENST00000630951 AMOTQ4VCS5 1084 aa28.94■■■□□ 2.22
RAB28-208ENST00000630951 PLEKHO1Q53GL0 409 aaPredicted RBP28.94■■■□□ 2.22
RAB28-208ENST00000630951 SULT6B1Q6IMI4 303 aa28.94■■■□□ 2.22
RAB28-208ENST00000630951 AEBP1Q8IUX7 1158 aa28.93■■■□□ 2.22
RAB28-208ENST00000630951 SPON1Q9HCB6 807 aa28.93■■■□□ 2.22
RAB28-208ENST00000630951 LY75O60449 1722 aa28.92■■■□□ 2.22
RAB28-208ENST00000630951 CNGB1Q14028 1251 aaPredicted RBP28.91■■■□□ 2.22
RAB28-208ENST00000630951 TOGARAM1Q9Y4F4 1720 aa28.91■■■□□ 2.22
RAB28-208ENST00000630951 CCNL1Q9UK58 526 aaPredicted RBP28.9■■■□□ 2.22
RAB28-208ENST00000630951 CASZ1Q86V15 1759 aa28.9■■■□□ 2.22
RAB28-208ENST00000630951 DIAPH1O60610 1272 aaKnown RBP28.89■■■□□ 2.22
RAB28-208ENST00000630951 PDGFDQ9GZP0 370 aaPredicted RBP28.89■■■□□ 2.22
RAB28-208ENST00000630951 HSP90AB1P08238 724 aaKnown RBP28.89■■■□□ 2.21
RAB28-208ENST00000630951 PIGBQ92521 554 aa28.89■■■□□ 2.21
RAB28-208ENST00000630951 AKT1S1Q96B36 256 aa28.89■■■□□ 2.21
RAB28-208ENST00000630951 HMGB2P26583 209 aaKnown RBP28.88■■■□□ 2.21
RAB28-208ENST00000630951 ZNF827Q17R98 1081 aa28.88■■■□□ 2.21
RAB28-208ENST00000630951 SMARCC1Q92922 1105 aaPredicted RBP28.88■■■□□ 2.21
RAB28-208ENST00000630951 ITGB4P16144 1822 aa28.88■■■□□ 2.21
RAB28-208ENST00000630951 KCNQ4P56696 695 aa28.87■■■□□ 2.21
RAB28-208ENST00000630951 TMOD3Q9NYL9 352 aa28.86■■■□□ 2.21
RAB28-208ENST00000630951 PALLDQ8WX93 1383 aa28.86■■■□□ 2.21
RAB28-208ENST00000630951 ZNF530Q6P9A1 599 aaPredicted RBP28.86■■■□□ 2.21
RAB28-208ENST00000630951 DCAF5Q96JK2 942 aa28.86■■■□□ 2.21
RAB28-208ENST00000630951 ERVV-2B6SEH9 535 aa28.83■■■□□ 2.21
RAB28-208ENST00000630951 ZBTB7AO95365 584 aa28.82■■■□□ 2.2
RAB28-208ENST00000630951 C1orf141Q5JVX7 400 aa28.82■■■□□ 2.2
RAB28-208ENST00000630951 COL3A1P02461 1466 aaPredicted RBP28.81■■■□□ 2.2
RAB28-208ENST00000630951 MTFR1LQ9H019 292 aa28.81■■■□□ 2.2
RAB28-208ENST00000630951 TFCP2L1Q9NZI6 479 aa28.81■■■□□ 2.2
RAB28-208ENST00000630951 HMOX1P09601 288 aa28.8■■■□□ 2.2
RAB28-208ENST00000630951 PPP1R1BQ9UD71 204 aaPredicted RBP28.78■■■□□ 2.2
RAB28-208ENST00000630951 CFAP53Q96M91 514 aa28.77■■■□□ 2.2
RAB28-208ENST00000630951 ASAP1Q9ULH1 1129 aa28.77■■■□□ 2.2
RAB28-208ENST00000630951 KDM6AO15550 1401 aaPredicted RBP28.77■■■□□ 2.2
RAB28-208ENST00000630951 PPP2R1AP30153 589 aa28.77■■■□□ 2.2
RAB28-208ENST00000630951 ATF5Q9Y2D1 282 aaPredicted RBP28.77■■■□□ 2.2
RAB28-208ENST00000630951 QSER1Q2KHR3 1735 aa28.76■■■□□ 2.19
RAB28-208ENST00000630951 PTGER2P43116 358 aa28.76■■■□□ 2.19
RAB28-208ENST00000630951 SLC16A10Q8TF71 515 aa28.76■■■□□ 2.19
RAB28-208ENST00000630951 PNPLA7Q6ZV29 1317 aa28.76■■■□□ 2.19
RAB28-208ENST00000630951 LOC102724428A0A0B4J2F2 783 aa28.75■■■□□ 2.19
RAB28-208ENST00000630951 SIK1P57059 783 aa28.75■■■□□ 2.19
RAB28-208ENST00000630951 AKAP4Q5JQC9 854 aa28.75■■■□□ 2.19
RAB28-208ENST00000630951 ATG3Q9NT62 314 aa28.75■■■□□ 2.19
RAB28-208ENST00000630951 U2SURPO15042 1029 aaKnown RBP28.74■■■□□ 2.19
RAB28-208ENST00000630951 CABP4P57796 275 aa28.74■■■□□ 2.19
RAB28-208ENST00000630951 C5P01031 1676 aa28.73■■■□□ 2.19
RAB28-208ENST00000630951 SGIP1Q9BQI5 828 aa28.71■■■□□ 2.19
RAB28-208ENST00000630951 TAF1LQ8IZX4 1826 aa28.7■■■□□ 2.19
RAB28-208ENST00000630951 MTHFSDQ2M296 383 aaKnown RBP28.7■■■□□ 2.18
RAB28-208ENST00000630951 NUDCQ9Y266 331 aa28.69■■■□□ 2.18
RAB28-208ENST00000630951 TUBGCP6Q96RT7 1819 aa28.68■■■□□ 2.18
RAB28-208ENST00000630951 NFATC2IPQ8NCF5 419 aa28.68■■■□□ 2.18
RAB28-208ENST00000630951 ATP6V1AP38606 617 aa28.67■■■□□ 2.18
RAB28-208ENST00000630951 FLAD1Q8NFF5 587 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms