RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 MEX3CQ5U5Q3 659 aaKnown RBP7.74□□□□□ -1.17
LINC00550-202ENST00000629570 MON2Q7Z3U7 1717 aa7.74□□□□□ -1.17
LINC00550-202ENST00000629570 CRYBG1Q9Y4K1 1723 aa7.74□□□□□ -1.17
LINC00550-202ENST00000629570 CDCA8Q53HL2 280 aa7.73□□□□□ -1.17
LINC00550-202ENST00000629570 ABTB2Q8N961 1025 aa7.73□□□□□ -1.17
LINC00550-202ENST00000629570 C8orf37Q96NL8 207 aa7.73□□□□□ -1.17
LINC00550-202ENST00000629570 POLR3GLQ9BT43 218 aa7.73□□□□□ -1.17
LINC00550-202ENST00000629570 RGS17Q9UGC6 210 aaPredicted RBP7.73□□□□□ -1.17
LINC00550-202ENST00000629570 TTC21BQ7Z4L5 1316 aa7.73□□□□□ -1.17
LINC00550-202ENST00000629570 BRD4O60885 1362 aaPredicted RBP7.72□□□□□ -1.17
LINC00550-202ENST00000629570 ANKRD36BQ8N2N9 1353 aa7.72□□□□□ -1.17
LINC00550-202ENST00000629570 EDC4Q6P2E9 1401 aaKnown RBP7.72□□□□□ -1.17
LINC00550-202ENST00000629570 PHRF1Q9P1Y6 1649 aaKnown RBP7.72□□□□□ -1.17
LINC00550-202ENST00000629570 HAP1P54257 671 aaPredicted RBP7.72□□□□□ -1.17
LINC00550-202ENST00000629570 HDGFL2Q7Z4V5 671 aaPredicted RBP7.72□□□□□ -1.17
LINC00550-202ENST00000629570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.72□□□□□ -1.17
LINC00550-202ENST00000629570 TERF2IPQ9NYB0 399 aa7.72□□□□□ -1.17
LINC00550-202ENST00000629570 USP19O94966 1318 aa7.72□□□□□ -1.17
LINC00550-202ENST00000629570 NUDT7P0C024 238 aa7.71□□□□□ -1.18
LINC00550-202ENST00000629570 NME9Q86XW9 330 aa7.71□□□□□ -1.18
LINC00550-202ENST00000629570 MARF1Q9Y4F3 1742 aaKnown RBP7.71□□□□□ -1.18
LINC00550-202ENST00000629570 AFF2P51816 1311 aa7.71□□□□□ -1.18
LINC00550-202ENST00000629570 KIF7Q2M1P5 1343 aa7.71□□□□□ -1.18
LINC00550-202ENST00000629570 TTC21AQ8NDW8 1320 aa7.71□□□□□ -1.18
LINC00550-202ENST00000629570 SLIT3O75094 1523 aa7.7□□□□□ -1.18
LINC00550-202ENST00000629570 ANKRD13DQ6ZTN6 518 aa7.7□□□□□ -1.18
LINC00550-202ENST00000629570 NGLY1Q96IV0 654 aa7.7□□□□□ -1.18
LINC00550-202ENST00000629570 KIAA0232Q92628 1395 aa7.7□□□□□ -1.18
LINC00550-202ENST00000629570 NSD3Q9BZ95 1437 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 PPP1R37O75864 691 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 PTGER2P43116 358 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 ZC3H6P61129 1189 aaKnown RBP7.69□□□□□ -1.18
LINC00550-202ENST00000629570 POTEAQ6S8J7 498 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 NLRP13Q86W25 1043 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 TMC2Q8TDI7 906 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 CARD14Q9BXL6 1004 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 PCDHGA4Q9Y5G9 962 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 WASHC2AQ641Q2 1341 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 OVOS2A0A0J9YW53 1432 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 OVOS2Q6IE36 1432 aa7.69□□□□□ -1.18
LINC00550-202ENST00000629570 BCL9LQ86UU0 1499 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 SLIT2O94813 1529 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 NFAT5O94916 1531 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 PLCH1Q4KWH8 1693 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 USP54Q70EL1 1684 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 FAM83GA6ND36 823 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 SLC34A2O95436 690 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 GCP02774 474 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 LSM11P83369 360 aaKnown RBP eCLIP7.68□□□□□ -1.18
LINC00550-202ENST00000629570 CHRNA2Q15822 529 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 FNBP4Q8N3X1 1017 aaPredicted RBP7.68□□□□□ -1.18
LINC00550-202ENST00000629570 PRDM11Q9NQV5 511 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 USP21Q9UK80 565 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 USP31Q70CQ4 1352 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 CCDC7Q96M83 1385 aa7.68□□□□□ -1.18
LINC00550-202ENST00000629570 ZNF772Q68DY9 489 aaPredicted RBP7.67□□□□□ -1.18
LINC00550-202ENST00000629570 ILDR2Q71H61 639 aa7.67□□□□□ -1.18
LINC00550-202ENST00000629570 PANK3Q9H999 370 aa7.67□□□□□ -1.18
LINC00550-202ENST00000629570 LHX6Q9UPM6 363 aa7.67□□□□□ -1.18
LINC00550-202ENST00000629570 CPDO75976 1380 aa7.67□□□□□ -1.18
LINC00550-202ENST00000629570 NRAPQ86VF7 1730 aa7.66□□□□□ -1.18
LINC00550-202ENST00000629570 COL14A1Q05707 1796 aaKnown RBP7.66□□□□□ -1.18
LINC00550-202ENST00000629570 ZBTB7CA1YPR0 619 aa7.66□□□□□ -1.18
LINC00550-202ENST00000629570 FYB1O15117 783 aa7.66□□□□□ -1.18
LINC00550-202ENST00000629570 ZEB1P37275 1124 aaPredicted RBP7.66□□□□□ -1.18
LINC00550-202ENST00000629570 GGNBP2Q9H3C7 697 aa7.66□□□□□ -1.18
LINC00550-202ENST00000629570 BTG4Q9NY30 223 aa7.66□□□□□ -1.18
LINC00550-202ENST00000629570 ATRNO75882 1429 aa7.66□□□□□ -1.18
LINC00550-202ENST00000629570 LMO7Q8WWI1 1683 aa7.66□□□□□ -1.18
LINC00550-202ENST00000629570 FBLN1P23142 703 aa7.65□□□□□ -1.18
LINC00550-202ENST00000629570 CGNL1Q0VF96 1302 aa7.65□□□□□ -1.18
LINC00550-202ENST00000629570 POTEEQ6S8J3 1075 aa7.65□□□□□ -1.18
LINC00550-202ENST00000629570 UNC5CLQ8IV45 518 aa7.65□□□□□ -1.18
LINC00550-202ENST00000629570 KCNH5Q8NCM2 988 aa7.65□□□□□ -1.18
LINC00550-202ENST00000629570 COG3Q96JB2 828 aa7.65□□□□□ -1.18
LINC00550-202ENST00000629570 KIF20BQ96Q89 1820 aa7.65□□□□□ -1.18
LINC00550-202ENST00000629570 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.65□□□□□ -1.18
LINC00550-202ENST00000629570 QTRT2Q9H974 415 aaKnown RBP7.65□□□□□ -1.18
LINC00550-202ENST00000629570 NWD2Q9ULI1 1742 aa7.65□□□□□ -1.18
LINC00550-202ENST00000629570 CAMTA1Q9Y6Y1 1673 aa7.65□□□□□ -1.18
LINC00550-202ENST00000629570 GLI3P10071 1580 aa7.64□□□□□ -1.19
LINC00550-202ENST00000629570 COL5A2P05997 1499 aaPredicted RBP7.64□□□□□ -1.19
LINC00550-202ENST00000629570 AATKQ6ZMQ8 1374 aa7.64□□□□□ -1.19
LINC00550-202ENST00000629570 PBX2P40425 430 aa7.64□□□□□ -1.19
LINC00550-202ENST00000629570 ARHGEF25Q86VW2 580 aa7.64□□□□□ -1.19
LINC00550-202ENST00000629570 TRPC5Q9UL62 973 aaPredicted RBP7.64□□□□□ -1.19
LINC00550-202ENST00000629570 AXIN2Q9Y2T1 843 aa7.64□□□□□ -1.19
LINC00550-202ENST00000629570 RGS12O14924 1447 aa7.63□□□□□ -1.19
LINC00550-202ENST00000629570 VPS72Q15906 364 aa7.63□□□□□ -1.19
LINC00550-202ENST00000629570 STRN4Q9NRL3 753 aa7.63□□□□□ -1.19
LINC00550-202ENST00000629570 COL18A1P39060 1754 aa7.63□□□□□ -1.19
LINC00550-202ENST00000629570 LTN1O94822 1766 aa7.62□□□□□ -1.19
LINC00550-202ENST00000629570 MAP3K19Q56UN5 1328 aa7.62□□□□□ -1.19
LINC00550-202ENST00000629570 RXRBP28702 533 aa7.62□□□□□ -1.19
LINC00550-202ENST00000629570 RBM6P78332 1123 aaKnown RBP7.62□□□□□ -1.19
LINC00550-202ENST00000629570 RRS1Q15050 365 aaKnown RBP7.62□□□□□ -1.19
LINC00550-202ENST00000629570 GJD4Q96KN9 370 aaPredicted RBP7.62□□□□□ -1.19
LINC00550-202ENST00000629570 CCDC9Q9Y3X0 531 aaKnown RBP7.62□□□□□ -1.19
LINC00550-202ENST00000629570 ABCC6O95255 1503 aa7.62□□□□□ -1.19
LINC00550-202ENST00000629570 SPATA31A5Q5VU36 1347 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms