RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 BARGINQ6ZT62 677 aa7.16□□□□□ -1.26
TCF4-268ENST00000629387 TDRD9Q8NDG6 1382 aaKnown RBP7.16□□□□□ -1.26
TCF4-268ENST00000629387 ATICP31939 592 aa7.15□□□□□ -1.26
TCF4-268ENST00000629387 JMYQ8N9B5 988 aa7.15□□□□□ -1.26
TCF4-268ENST00000629387 MKL1Q969V6 931 aa7.15□□□□□ -1.26
TCF4-268ENST00000629387 CHPF2Q9P2E5 772 aa7.15□□□□□ -1.26
TCF4-268ENST00000629387 ZNF232Q9UNY5 417 aa7.15□□□□□ -1.26
TCF4-268ENST00000629387 SH3BGRP55822 239 aaPredicted RBP7.15□□□□□ -1.26
TCF4-268ENST00000629387 LMBRD2Q68DH5 695 aaPredicted RBP7.15□□□□□ -1.26
TCF4-268ENST00000629387 CCDC91Q7Z6B0 441 aa7.15□□□□□ -1.26
TCF4-268ENST00000629387 VPS37AQ8NEZ2 397 aa7.15□□□□□ -1.26
TCF4-268ENST00000629387 BRMS1Q9HCU9 246 aa7.15□□□□□ -1.26
TCF4-268ENST00000629387 FAN1Q9Y2M0 1017 aa7.15□□□□□ -1.26
TCF4-268ENST00000629387 V9GYY5 206 aaPredicted RBP7.15□□□□□ -1.26
TCF4-268ENST00000629387 KCNA2P16389 499 aa7.15□□□□□ -1.27
TCF4-268ENST00000629387 MSNP26038 577 aaKnown RBP7.15□□□□□ -1.27
TCF4-268ENST00000629387 SRPK2P78362 688 aaKnown RBP7.15□□□□□ -1.27
TCF4-268ENST00000629387 IVNS1ABPQ9Y6Y0 642 aa7.15□□□□□ -1.27
TCF4-268ENST00000629387 MAP2K2P36507 400 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 RIPK4P57078 832 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 IGBP1P78318 339 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 CCDC15Q0P6D6 951 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 TRIM29Q14134 588 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 AP1ARQ63HQ0 302 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 CDC37L1Q7L3B6 337 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 CHCHD4Q8N4Q1 142 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 ENOX1Q8TC92 643 aaKnown RBP7.14□□□□□ -1.27
TCF4-268ENST00000629387 RPS6KC1Q96S38 1066 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 PRR12Q9ULL5 1215 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 RBM47A0AV96 593 aaKnown RBP7.14□□□□□ -1.27
TCF4-268ENST00000629387 IGHDP01880 384 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 CACTIN-AS1Q8N1I8 211 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 ZHX3Q9H4I2 956 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 MED4Q9NPJ6 270 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 CWC15Q9P013 229 aaKnown RBP7.14□□□□□ -1.27
TCF4-268ENST00000629387 ABCF2Q9UG63 623 aa7.14□□□□□ -1.27
TCF4-268ENST00000629387 MKRN1Q9UHC7 482 aaKnown RBP7.14□□□□□ -1.27
TCF4-268ENST00000629387 PDS5BQ9NTI5 1447 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 HOXA2O43364 376 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 POLA2Q14181 598 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 TRIM74Q86UV6 250 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 TRIM73Q86UV7 250 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 RWDD1Q9H446 243 aaPredicted RBP7.13□□□□□ -1.27
TCF4-268ENST00000629387 CDC5LQ99459 802 aaKnown RBP7.13□□□□□ -1.27
TCF4-268ENST00000629387 HDAC9Q9UKV0 1011 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 PHF8Q9UPP1 1060 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 ZNF394Q53GI3 561 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 NFXL1Q6ZNB6 911 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 FMNL3Q8IVF7 1028 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 MPP4Q96JB8 637 aa7.13□□□□□ -1.27
TCF4-268ENST00000629387 ARHGEF11O15085 1522 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 IFT88Q13099 833 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 TSR1Q2NL82 804 aaKnown RBP7.12□□□□□ -1.27
TCF4-268ENST00000629387 DYNC1I1O14576 645 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 PPP1R15AO75807 674 aaPredicted RBP7.12□□□□□ -1.27
TCF4-268ENST00000629387 SKILP12757 684 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 ATP6V1AP38606 617 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 ZSCAN26Q16670 478 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 JAKMIP3Q5VZ66 844 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 LCA5Q86VQ0 697 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 ZSCAN30Q86W11 494 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 RPUSD2Q8IZ73 545 aaKnown RBP7.12□□□□□ -1.27
TCF4-268ENST00000629387 KCNH8Q96L42 1107 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 IP6K2Q9UHH9 426 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 GUCY2CP25092 1073 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 POU5F1Q01860 360 aaKnown RBP7.12□□□□□ -1.27
TCF4-268ENST00000629387 DPH6Q7L8W6 267 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 IQCGQ9H095 443 aaKnown RBP7.12□□□□□ -1.27
TCF4-268ENST00000629387 PAXBP1Q9Y5B6 917 aa7.12□□□□□ -1.27
TCF4-268ENST00000629387 CFAP69A5D8W1 941 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 TCF3P15923 654 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 TOMM20Q15388 145 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 IQCF2Q8IXL9 164 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.11□□□□□ -1.27
TCF4-268ENST00000629387 RASSF4Q9H2L5 321 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 SBNO2Q9Y2G9 1366 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 RUSC2Q8N2Y8 1516 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 ELL2O00472 640 aaPredicted RBP7.11□□□□□ -1.27
TCF4-268ENST00000629387 NPHP1O15259 732 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 CBFA2T2O43439 604 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 CD151P48509 253 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 TTC19Q6DKK2 380 aaPredicted RBP7.11□□□□□ -1.27
TCF4-268ENST00000629387 DZIP1Q86YF9 867 aaKnown RBP7.11□□□□□ -1.27
TCF4-268ENST00000629387 CWC25Q9NXE8 425 aaPredicted RBP7.11□□□□□ -1.27
TCF4-268ENST00000629387 SFMBT1Q9UHJ3 866 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 AMOTL2Q9Y2J4 779 aa7.11□□□□□ -1.27
TCF4-268ENST00000629387 RBM46Q8TBY0 533 aaKnown RBP7.11□□□□□ -1.27
TCF4-268ENST00000629387 HIP1RO75146 1068 aa7.1□□□□□ -1.27
TCF4-268ENST00000629387 MYLK4Q86YV6 388 aaPredicted RBP7.1□□□□□ -1.27
TCF4-268ENST00000629387 ATRIPQ8WXE1 791 aa7.1□□□□□ -1.27
TCF4-268ENST00000629387 PEX19P40855 299 aa7.1□□□□□ -1.27
TCF4-268ENST00000629387 INO80BQ9C086 356 aaPredicted RBP7.1□□□□□ -1.27
TCF4-268ENST00000629387 RRP7BPQ9NSQ0 103 aa7.1□□□□□ -1.27
TCF4-268ENST00000629387 TCEAL9Q9UHQ7 104 aa7.1□□□□□ -1.27
TCF4-268ENST00000629387 U3KPZ7 1027 aaPredicted RBP7.1□□□□□ -1.27
TCF4-268ENST00000629387 PRPF4BQ13523 1007 aaKnown RBP7.1□□□□□ -1.27
TCF4-268ENST00000629387 BMS1Q14692 1282 aaKnown RBP7.1□□□□□ -1.27
TCF4-268ENST00000629387 ARMC3Q5W041 872 aa7.1□□□□□ -1.27
TCF4-268ENST00000629387 DZIP3Q86Y13 1208 aaKnown RBP7.1□□□□□ -1.27
TCF4-268ENST00000629387 VMP1Q96GC9 406 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms