RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 SHANK3Q9BYB0 1731 aa12.53□□□□□ -0.4
SPTAN1-219ENST00000629378 PRIM1P49642 420 aaKnown RBP12.52□□□□□ -0.41
SPTAN1-219ENST00000629378 CDCA8Q53HL2 280 aa12.52□□□□□ -0.41
SPTAN1-219ENST00000629378 MEGF6O75095 1541 aa12.52□□□□□ -0.41
SPTAN1-219ENST00000629378 ZCRB1Q8TBF4 217 aaKnown RBP12.51□□□□□ -0.41
SPTAN1-219ENST00000629378 SYTL4Q96C24 671 aaPredicted RBP12.51□□□□□ -0.41
SPTAN1-219ENST00000629378 PTGER2P43116 358 aa12.5□□□□□ -0.41
SPTAN1-219ENST00000629378 ZNF827Q17R98 1081 aa12.5□□□□□ -0.41
SPTAN1-219ENST00000629378 EMILIN1Q9Y6C2 1016 aa12.5□□□□□ -0.41
SPTAN1-219ENST00000629378 NSD3Q9BZ95 1437 aa12.5□□□□□ -0.41
SPTAN1-219ENST00000629378 MAP2P11137 1827 aaKnown RBP12.49□□□□□ -0.41
SPTAN1-219ENST00000629378 DOT1LQ8TEK3 1739 aa12.49□□□□□ -0.41
SPTAN1-219ENST00000629378 PPM1GO15355 546 aaPredicted RBP12.49□□□□□ -0.41
SPTAN1-219ENST00000629378 EIF4G2P78344 907 aaKnown RBP eCLIP12.49□□□□□ -0.41
SPTAN1-219ENST00000629378 RTL1A6NKG5 1358 aa12.48□□□□□ -0.41
SPTAN1-219ENST00000629378 HSPA5P11021 654 aaKnown RBP12.48□□□□□ -0.41
SPTAN1-219ENST00000629378 PAPPAQ13219 1627 aa12.48□□□□□ -0.41
SPTAN1-219ENST00000629378 NSD2O96028 1365 aa12.47□□□□□ -0.41
SPTAN1-219ENST00000629378 INSRP06213 1382 aa12.47□□□□□ -0.41
SPTAN1-219ENST00000629378 RAPGEF4Q8WZA2 1011 aa12.47□□□□□ -0.41
SPTAN1-219ENST00000629378 TATP17735 454 aaPredicted RBP12.46□□□□□ -0.41
SPTAN1-219ENST00000629378 TNNT2P45379 298 aaPredicted RBP12.46□□□□□ -0.41
SPTAN1-219ENST00000629378 AKT1S1Q96B36 256 aa12.46□□□□□ -0.41
SPTAN1-219ENST00000629378 FLT4P35916 1363 aa12.45□□□□□ -0.42
SPTAN1-219ENST00000629378 SGIP1Q9BQI5 828 aa12.45□□□□□ -0.42
SPTAN1-219ENST00000629378 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
SPTAN1-219ENST00000629378 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
SPTAN1-219ENST00000629378 CYP27B1O15528 508 aa12.44□□□□□ -0.42
SPTAN1-219ENST00000629378 FHDC1Q9C0D6 1143 aaPredicted RBP12.44□□□□□ -0.42
SPTAN1-219ENST00000629378 MTFR1LQ9H019 292 aa12.44□□□□□ -0.42
SPTAN1-219ENST00000629378 PANK3Q9H999 370 aa12.44□□□□□ -0.42
SPTAN1-219ENST00000629378 LY75O60449 1722 aa12.44□□□□□ -0.42
SPTAN1-219ENST00000629378 SLC27A3Q5K4L6 730 aa12.43□□□□□ -0.42
SPTAN1-219ENST00000629378 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
SPTAN1-219ENST00000629378 CGNL1Q0VF96 1302 aa12.42□□□□□ -0.42
SPTAN1-219ENST00000629378 PNPLA7Q6ZV29 1317 aa12.42□□□□□ -0.42
SPTAN1-219ENST00000629378 ITGB4P16144 1822 aa12.42□□□□□ -0.42
SPTAN1-219ENST00000629378 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
SPTAN1-219ENST00000629378 EYA1Q99502 592 aa12.42□□□□□ -0.42
SPTAN1-219ENST00000629378 SYT17Q9BSW7 474 aa12.42□□□□□ -0.42
SPTAN1-219ENST00000629378 TFCP2L1Q9NZI6 479 aa12.42□□□□□ -0.42
SPTAN1-219ENST00000629378 CCNL1Q9UK58 526 aaPredicted RBP12.42□□□□□ -0.42
SPTAN1-219ENST00000629378 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
SPTAN1-219ENST00000629378 YY1P25490 414 aa12.41□□□□□ -0.42
SPTAN1-219ENST00000629378 ARXQ96QS3 562 aa12.41□□□□□ -0.42
SPTAN1-219ENST00000629378 ANKRD26Q9UPS8 1709 aa12.41□□□□□ -0.42
SPTAN1-219ENST00000629378 KIF24Q5T7B8 1368 aa12.41□□□□□ -0.42
SPTAN1-219ENST00000629378 PCDH11XQ9BZA7 1347 aa12.4□□□□□ -0.42
SPTAN1-219ENST00000629378 PCDH11YQ9BZA8 1340 aa12.4□□□□□ -0.42
SPTAN1-219ENST00000629378 TOGARAM1Q9Y4F4 1720 aa12.4□□□□□ -0.42
SPTAN1-219ENST00000629378 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.43
SPTAN1-219ENST00000629378 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
SPTAN1-219ENST00000629378 DDX10Q13206 875 aaKnown RBP12.39□□□□□ -0.43
SPTAN1-219ENST00000629378 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
SPTAN1-219ENST00000629378 PKD1L3Q7Z443 1732 aa12.39□□□□□ -0.43
SPTAN1-219ENST00000629378 MSH5O43196 834 aa12.38□□□□□ -0.43
SPTAN1-219ENST00000629378 SMIM5Q71RC9 77 aa12.38□□□□□ -0.43
SPTAN1-219ENST00000629378 COL23A1Q86Y22 540 aaPredicted RBP12.38□□□□□ -0.43
SPTAN1-219ENST00000629378 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
SPTAN1-219ENST00000629378 PIGBQ92521 554 aa12.38□□□□□ -0.43
SPTAN1-219ENST00000629378 NCAPD2Q15021 1401 aa12.37□□□□□ -0.43
SPTAN1-219ENST00000629378 TAF1LQ8IZX4 1826 aa12.37□□□□□ -0.43
SPTAN1-219ENST00000629378 SPG7Q9UQ90 795 aa12.37□□□□□ -0.43
SPTAN1-219ENST00000629378 C5P01031 1676 aa12.36□□□□□ -0.43
SPTAN1-219ENST00000629378 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
SPTAN1-219ENST00000629378 SLC16A10Q8TF71 515 aa12.36□□□□□ -0.43
SPTAN1-219ENST00000629378 COL24A1Q17RW2 1714 aa12.36□□□□□ -0.43
SPTAN1-219ENST00000629378 PALLDQ8WX93 1383 aa12.35□□□□□ -0.43
SPTAN1-219ENST00000629378 MSL1Q68DK7 614 aa12.35□□□□□ -0.43
SPTAN1-219ENST00000629378 MORC1Q86VD1 984 aa12.35□□□□□ -0.43
SPTAN1-219ENST00000629378 AMIGO3Q86WK7 504 aa12.35□□□□□ -0.43
SPTAN1-219ENST00000629378 MIER1Q8N108 512 aa12.35□□□□□ -0.43
SPTAN1-219ENST00000629378 PHKG2P15735 406 aa12.34□□□□□ -0.43
SPTAN1-219ENST00000629378 POLD1P28340 1107 aa12.34□□□□□ -0.43
SPTAN1-219ENST00000629378 ASAP1Q9ULH1 1129 aa12.34□□□□□ -0.43
SPTAN1-219ENST00000629378 IFNL2Q8IZJ0 200 aa12.33□□□□□ -0.44
SPTAN1-219ENST00000629378 NLGN2Q8NFZ4 835 aa12.33□□□□□ -0.44
SPTAN1-219ENST00000629378 UTRNP46939 3433 aa12.32□□□□□ -0.44
SPTAN1-219ENST00000629378 AEBP1Q8IUX7 1158 aa12.32□□□□□ -0.44
SPTAN1-219ENST00000629378 SMARCC1Q92922 1105 aaPredicted RBP12.32□□□□□ -0.44
SPTAN1-219ENST00000629378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.446e-7■□□□□ 9
SPTAN1-219ENST00000629378 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
SPTAN1-219ENST00000629378 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
SPTAN1-219ENST00000629378 IGSF1Q8N6C5 1336 aa12.32□□□□□ -0.44
SPTAN1-219ENST00000629378 C4BP0C0L5 1744 aa12.31□□□□□ -0.44
SPTAN1-219ENST00000629378 PHF14O94880 888 aa12.31□□□□□ -0.44
SPTAN1-219ENST00000629378 GPR162Q16538 588 aa12.31□□□□□ -0.44
SPTAN1-219ENST00000629378 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
SPTAN1-219ENST00000629378 LINC00116Q8NCU8 138 aa12.31□□□□□ -0.44
SPTAN1-219ENST00000629378 ATG3Q9NT62 314 aa12.31□□□□□ -0.44
SPTAN1-219ENST00000629378 KNSTRNQ9Y448 316 aa12.31□□□□□ -0.44
SPTAN1-219ENST00000629378 CHD4Q14839 1912 aa12.31□□□□□ -0.44
SPTAN1-219ENST00000629378 UBR3Q6ZT12 1888 aa12.3□□□□□ -0.44
SPTAN1-219ENST00000629378 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
SPTAN1-219ENST00000629378 SIK1P57059 783 aa12.3□□□□□ -0.44
SPTAN1-219ENST00000629378 ITPK1Q13572 414 aa12.3□□□□□ -0.44
SPTAN1-219ENST00000629378 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
SPTAN1-219ENST00000629378 AK7Q96M32 723 aa12.3□□□□□ -0.44
SPTAN1-219ENST00000629378 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
SPTAN1-219ENST00000629378 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 341.4 ms