RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 NBPF6Q5VWK0 638 aa14.9□□□□□ -0.02
CHD2-217ENST00000629136 NBPF4Q96M43 638 aa14.9□□□□□ -0.02
CHD2-217ENST00000629136 TUBGCP6Q96RT7 1819 aa14.89□□□□□ -0.03
CHD2-217ENST00000629136 KCNQ2O43526 872 aa14.89□□□□□ -0.03
CHD2-217ENST00000629136 USHBP1Q8N6Y0 703 aa14.89□□□□□ -0.03
CHD2-217ENST00000629136 QSER1Q2KHR3 1735 aa14.89□□□□□ -0.03
CHD2-217ENST00000629136 ACSBG1Q96GR2 724 aa14.88□□□□□ -0.03
CHD2-217ENST00000629136 PANK3Q9H999 370 aa14.88□□□□□ -0.03
CHD2-217ENST00000629136 NSD2O96028 1365 aa14.87□□□□□ -0.03
CHD2-217ENST00000629136 KIF7Q2M1P5 1343 aa14.87□□□□□ -0.03
CHD2-217ENST00000629136 PROM2Q8N271 834 aa14.86□□□□□ -0.03
CHD2-217ENST00000629136 ANO8Q9HCE9 1232 aaPredicted RBP14.86□□□□□ -0.03
CHD2-217ENST00000629136 POLKQ9UBT6 870 aa14.85□□□□□ -0.03
CHD2-217ENST00000629136 WASHC2AQ641Q2 1341 aa14.85□□□□□ -0.03
CHD2-217ENST00000629136 DDX54Q8TDD1 881 aaKnown RBP14.84□□□□□ -0.03
CHD2-217ENST00000629136 TAF1LQ8IZX4 1826 aa14.84□□□□□ -0.03
CHD2-217ENST00000629136 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.04
CHD2-217ENST00000629136 TXNRD1Q16881 649 aa14.83□□□□□ -0.04
CHD2-217ENST00000629136 NBPF14Q5TI25 921 aa14.83□□□□□ -0.04
CHD2-217ENST00000629136 ZCRB1Q8TBF4 217 aaKnown RBP14.83□□□□□ -0.04
CHD2-217ENST00000629136 C5P01031 1676 aa14.83□□□□□ -0.04
CHD2-217ENST00000629136 TNNT2P45379 298 aaPredicted RBP14.82□□□□□ -0.04
CHD2-217ENST00000629136 RAPGEF4Q8WZA2 1011 aa14.82□□□□□ -0.04
CHD2-217ENST00000629136 VIRMAQ69YN4 1812 aaKnown RBP14.82□□□□□ -0.04
CHD2-217ENST00000629136 TATP17735 454 aaPredicted RBP14.81□□□□□ -0.04
CHD2-217ENST00000629136 PCDH11XQ9BZA7 1347 aa14.8□□□□□ -0.04
CHD2-217ENST00000629136 PCDH11YQ9BZA8 1340 aa14.8□□□□□ -0.04
CHD2-217ENST00000629136 COL24A1Q17RW2 1714 aa14.8□□□□□ -0.04
CHD2-217ENST00000629136 EIF4A2Q14240 407 aaKnown RBP14.79□□□□□ -0.04
CHD2-217ENST00000629136 EYA1Q99502 592 aa14.79□□□□□ -0.04
CHD2-217ENST00000629136 AMER1Q5JTC6 1135 aaPredicted RBP14.78□□□□□ -0.04
CHD2-217ENST00000629136 KNSTRNQ9Y448 316 aa14.78□□□□□ -0.04
CHD2-217ENST00000629136 IGSF1Q8N6C5 1336 aa14.77□□□□□ -0.04
CHD2-217ENST00000629136 CYP27B1O15528 508 aa14.77□□□□□ -0.05
CHD2-217ENST00000629136 PRIM1P49642 420 aaKnown RBP14.77□□□□□ -0.05
CHD2-217ENST00000629136 MORC1Q86VD1 984 aa14.77□□□□□ -0.05
CHD2-217ENST00000629136 SYTL4Q96C24 671 aaPredicted RBP14.77□□□□□ -0.05
CHD2-217ENST00000629136 PLEKHG2Q9H7P9 1386 aa14.76□□□□□ -0.05
CHD2-217ENST00000629136 PER1O15534 1290 aaPredicted RBP14.76□□□□□ -0.05
CHD2-217ENST00000629136 SLC15A2Q16348 729 aa14.76□□□□□ -0.05
CHD2-217ENST00000629136 PDGFDQ9GZP0 370 aaPredicted RBP14.76□□□□□ -0.05
CHD2-217ENST00000629136 LRRC4BQ9NT99 713 aa14.76□□□□□ -0.05
CHD2-217ENST00000629136 ZNF827Q17R98 1081 aa14.74□□□□□ -0.05
CHD2-217ENST00000629136 STK32BQ9NY57 414 aa14.74□□□□□ -0.05
CHD2-217ENST00000629136 SCN11AQ9UI33 1791 aa14.74□□□□□ -0.05
CHD2-217ENST00000629136 C4BP0C0L5 1744 aa14.73□□□□□ -0.05
CHD2-217ENST00000629136 UBR3Q6ZT12 1888 aa14.73□□□□□ -0.05
CHD2-217ENST00000629136 SLC27A3Q5K4L6 730 aa14.72□□□□□ -0.05
CHD2-217ENST00000629136 ZNF831Q5JPB2 1677 aa14.71□□□□□ -0.05
CHD2-217ENST00000629136 COL3A1P02461 1466 aaPredicted RBP14.71□□□□□ -0.05
CHD2-217ENST00000629136 NKX1-1Q15270 411 aaPredicted RBP14.71□□□□□ -0.05
CHD2-217ENST00000629136 SPON1Q9HCB6 807 aa14.71□□□□□ -0.05
CHD2-217ENST00000629136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.71□□□□□ -0.053e-8■■■□□ 16.3
CHD2-217ENST00000629136 SPG7Q9UQ90 795 aa14.71□□□□□ -0.05
CHD2-217ENST00000629136 COL5A3P25940 1745 aaPredicted RBP14.71□□□□□ -0.05
CHD2-217ENST00000629136 KDRP35968 1356 aa14.71□□□□□ -0.06
CHD2-217ENST00000629136 NPC1L1Q9UHC9 1359 aa14.71□□□□□ -0.06
CHD2-217ENST00000629136 KCNQ4P56696 695 aa14.7□□□□□ -0.06
CHD2-217ENST00000629136 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
CHD2-217ENST00000629136 PALLDQ8WX93 1383 aa14.7□□□□□ -0.06
CHD2-217ENST00000629136 ADAMTS7Q9UKP4 1686 aa14.69□□□□□ -0.06
CHD2-217ENST00000629136 ZBTB7AO95365 584 aa14.69□□□□□ -0.06
CHD2-217ENST00000629136 PHKG2P15735 406 aa14.69□□□□□ -0.06
CHD2-217ENST00000629136 KDM6AO15550 1401 aaPredicted RBP14.68□□□□□ -0.06
CHD2-217ENST00000629136 CC2D1BQ5T0F9 858 aaKnown RBP14.68□□□□□ -0.06
CHD2-217ENST00000629136 MPRIPQ6WCQ1 1025 aa14.68□□□□□ -0.06
CHD2-217ENST00000629136 AEBP1Q8IUX7 1158 aa14.68□□□□□ -0.06
CHD2-217ENST00000629136 CCNL1Q9UK58 526 aaPredicted RBP14.68□□□□□ -0.06
CHD2-217ENST00000629136 CICQ96RK0 1608 aaPredicted RBP14.67□□□□□ -0.06
CHD2-217ENST00000629136 IL13P35225 146 aa14.67□□□□□ -0.06
CHD2-217ENST00000629136 PTGER2P43116 358 aa14.67□□□□□ -0.06
CHD2-217ENST00000629136 IFNL2Q8IZJ0 200 aa14.67□□□□□ -0.06
CHD2-217ENST00000629136 PNPLA7Q6ZV29 1317 aa14.66□□□□□ -0.06
CHD2-217ENST00000629136 MTHFSP49914 203 aa14.66□□□□□ -0.06
CHD2-217ENST00000629136 PIGBQ92521 554 aa14.66□□□□□ -0.06
CHD2-217ENST00000629136 SGIP1Q9BQI5 828 aa14.65□□□□□ -0.06
CHD2-217ENST00000629136 MTFR1LQ9H019 292 aa14.65□□□□□ -0.06
CHD2-217ENST00000629136 TJP1Q07157 1748 aa14.65□□□□□ -0.06
CHD2-217ENST00000629136 SULT6B1Q6IMI4 303 aa14.64□□□□□ -0.07
CHD2-217ENST00000629136 PPP1R1BQ9UD71 204 aaPredicted RBP14.64□□□□□ -0.07
CHD2-217ENST00000629136 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
CHD2-217ENST00000629136 SIPA1L3O60292 1781 aaPredicted RBP14.63□□□□□ -0.07
CHD2-217ENST00000629136 TMOD3Q9NYL9 352 aa14.63□□□□□ -0.07
CHD2-217ENST00000629136 C4AP0C0L4 1744 aa14.63□□□□□ -0.07
CHD2-217ENST00000629136 MRC1P22897 1456 aa14.63□□□□□ -0.07
CHD2-217ENST00000629136 CNGB1Q14028 1251 aaPredicted RBP14.62□□□□□ -0.07
CHD2-217ENST00000629136 AMOTQ4VCS5 1084 aa14.62□□□□□ -0.07
CHD2-217ENST00000629136 PLEKHO1Q53GL0 409 aaPredicted RBP14.62□□□□□ -0.07
CHD2-217ENST00000629136 ZNF530Q6P9A1 599 aaPredicted RBP14.62□□□□□ -0.07
CHD2-217ENST00000629136 SMARCC1Q92922 1105 aaPredicted RBP14.62□□□□□ -0.07
CHD2-217ENST00000629136 TFCP2L1Q9NZI6 479 aa14.62□□□□□ -0.07
CHD2-217ENST00000629136 UBR2Q8IWV8 1755 aa14.62□□□□□ -0.07
CHD2-217ENST00000629136 DCAF5Q96JK2 942 aa14.61□□□□□ -0.07
CHD2-217ENST00000629136 MYH14Q7Z406 1995 aaKnown RBP14.6□□□□□ -0.07
CHD2-217ENST00000629136 ASAP1Q9ULH1 1129 aa14.6□□□□□ -0.07
CHD2-217ENST00000629136 ERVV-2B6SEH9 535 aa14.59□□□□□ -0.07
CHD2-217ENST00000629136 DIAPH1O60610 1272 aaKnown RBP14.59□□□□□ -0.07
CHD2-217ENST00000629136 HSP90AB1P08238 724 aaKnown RBP14.59□□□□□ -0.07
CHD2-217ENST00000629136 HMOX1P09601 288 aa14.59□□□□□ -0.07
CHD2-217ENST00000629136 SLC16A10Q8TF71 515 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms