RNA–Protein interactions for RNA: ENST00000628665.1

CHRNA4-212, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 4

Gene CHRNA4, Length 546 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-212ENST00000628665 WASHC2AQ641Q2 1341 aa21.79■■□□□ 1.08
CHRNA4-212ENST00000628665 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
CHRNA4-212ENST00000628665 RGPD3A6NKT7 1758 aaPredicted RBP21.78■■□□□ 1.08
CHRNA4-212ENST00000628665 RGPD4Q7Z3J3 1758 aa21.78■■□□□ 1.08
CHRNA4-212ENST00000628665 MORC1Q86VD1 984 aa21.77■■□□□ 1.08
CHRNA4-212ENST00000628665 NUP188Q5SRE5 1749 aa21.77■■□□□ 1.08
CHRNA4-212ENST00000628665 NHSQ6T4R5 1651 aa21.75■■□□□ 1.07
CHRNA4-212ENST00000628665 MEGF6O75095 1541 aa21.75■■□□□ 1.07
CHRNA4-212ENST00000628665 TXNRD1Q16881 649 aa21.74■■□□□ 1.07
CHRNA4-212ENST00000628665 SYTL4Q96C24 671 aaPredicted RBP21.74■■□□□ 1.07
CHRNA4-212ENST00000628665 PROM2Q8N271 834 aa21.71■■□□□ 1.07
CHRNA4-212ENST00000628665 PCDH11XQ9BZA7 1347 aa21.71■■□□□ 1.07
CHRNA4-212ENST00000628665 PCDH11YQ9BZA8 1340 aa21.71■■□□□ 1.07
CHRNA4-212ENST00000628665 PRIM1P49642 420 aaKnown RBP21.7■■□□□ 1.06
CHRNA4-212ENST00000628665 EYA1Q99502 592 aa21.7■■□□□ 1.06
CHRNA4-212ENST00000628665 BTAF1O14981 1849 aa21.69■■□□□ 1.06
CHRNA4-212ENST00000628665 STK32BQ9NY57 414 aa21.69■■□□□ 1.06
CHRNA4-212ENST00000628665 EIF4A2Q14240 407 aaKnown RBP21.68■■□□□ 1.06
CHRNA4-212ENST00000628665 SPG7Q9UQ90 795 aa21.68■■□□□ 1.06
CHRNA4-212ENST00000628665 LRP5O75197 1615 aa21.68■■□□□ 1.06
CHRNA4-212ENST00000628665 SHANK3Q9BYB0 1731 aa21.66■■□□□ 1.06
CHRNA4-212ENST00000628665 AMER1Q5JTC6 1135 aaPredicted RBP21.66■■□□□ 1.06
CHRNA4-212ENST00000628665 ANO8Q9HCE9 1232 aaPredicted RBP21.65■■□□□ 1.06
CHRNA4-212ENST00000628665 DOT1LQ8TEK3 1739 aa21.64■■□□□ 1.06
CHRNA4-212ENST00000628665 NCAPD2Q15021 1401 aa21.63■■□□□ 1.05
CHRNA4-212ENST00000628665 SLC15A2Q16348 729 aa21.63■■□□□ 1.05
CHRNA4-212ENST00000628665 SLC27A3Q5K4L6 730 aa21.63■■□□□ 1.05
CHRNA4-212ENST00000628665 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.63■■□□□ 1.05
CHRNA4-212ENST00000628665 CYP27B1O15528 508 aa21.62■■□□□ 1.05
CHRNA4-212ENST00000628665 CC2D1BQ5T0F9 858 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-212ENST00000628665 SPON1Q9HCB6 807 aa21.62■■□□□ 1.05
CHRNA4-212ENST00000628665 PER1O15534 1290 aaPredicted RBP21.61■■□□□ 1.05
CHRNA4-212ENST00000628665 IGSF1Q8N6C5 1336 aa21.59■■□□□ 1.05
CHRNA4-212ENST00000628665 PKD1L3Q7Z443 1732 aa21.59■■□□□ 1.05
CHRNA4-212ENST00000628665 IFNL2Q8IZJ0 200 aa21.59■■□□□ 1.05
CHRNA4-212ENST00000628665 PPP1R1BQ9UD71 204 aaPredicted RBP21.59■■□□□ 1.05
CHRNA4-212ENST00000628665 HMGB2P26583 209 aaKnown RBP21.58■■□□□ 1.05
CHRNA4-212ENST00000628665 CNGB1Q14028 1251 aaPredicted RBP21.58■■□□□ 1.05
CHRNA4-212ENST00000628665 MPRIPQ6WCQ1 1025 aa21.58■■□□□ 1.05
CHRNA4-212ENST00000628665 LRRC4BQ9NT99 713 aa21.57■■□□□ 1.04
CHRNA4-212ENST00000628665 MTHFSP49914 203 aa21.56■■□□□ 1.04
CHRNA4-212ENST00000628665 NKX1-1Q15270 411 aaPredicted RBP21.56■■□□□ 1.04
CHRNA4-212ENST00000628665 PLEKHO1Q53GL0 409 aaPredicted RBP21.56■■□□□ 1.04
CHRNA4-212ENST00000628665 CCNL1Q9UK58 526 aaPredicted RBP21.56■■□□□ 1.04
CHRNA4-212ENST00000628665 PLEKHG2Q9H7P9 1386 aa21.56■■□□□ 1.04
CHRNA4-212ENST00000628665 NPC1L1Q9UHC9 1359 aa21.54■■□□□ 1.04
CHRNA4-212ENST00000628665 PHKG2P15735 406 aa21.54■■□□□ 1.04
CHRNA4-212ENST00000628665 AMOTQ4VCS5 1084 aa21.54■■□□□ 1.04
CHRNA4-212ENST00000628665 SMARCC1Q92922 1105 aaPredicted RBP21.54■■□□□ 1.04
CHRNA4-212ENST00000628665 ZBTB7AO95365 584 aa21.53■■□□□ 1.04
CHRNA4-212ENST00000628665 HSP90AB1P08238 724 aaKnown RBP21.53■■□□□ 1.04
CHRNA4-212ENST00000628665 SULT6B1Q6IMI4 303 aa21.53■■□□□ 1.04
CHRNA4-212ENST00000628665 IL13P35225 146 aa21.52■■□□□ 1.04
CHRNA4-212ENST00000628665 KCNQ4P56696 695 aa21.52■■□□□ 1.04
CHRNA4-212ENST00000628665 PDGFDQ9GZP0 370 aaPredicted RBP21.52■■□□□ 1.04
CHRNA4-212ENST00000628665 TMOD3Q9NYL9 352 aa21.52■■□□□ 1.04
CHRNA4-212ENST00000628665 TFCP2L1Q9NZI6 479 aa21.52■■□□□ 1.04
CHRNA4-212ENST00000628665 LY75O60449 1722 aa21.52■■□□□ 1.03
CHRNA4-212ENST00000628665 ITGB4P16144 1822 aa21.51■■□□□ 1.03
CHRNA4-212ENST00000628665 ZNF827Q17R98 1081 aa21.51■■□□□ 1.03
CHRNA4-212ENST00000628665 ZNF530Q6P9A1 599 aaPredicted RBP21.51■■□□□ 1.03
CHRNA4-212ENST00000628665 CASZ1Q86V15 1759 aa21.51■■□□□ 1.03
CHRNA4-212ENST00000628665 C1orf141Q5JVX7 400 aa21.5■■□□□ 1.03
CHRNA4-212ENST00000628665 AEBP1Q8IUX7 1158 aa21.5■■□□□ 1.03
CHRNA4-212ENST00000628665 PIGBQ92521 554 aa21.5■■□□□ 1.03
CHRNA4-212ENST00000628665 AKT1S1Q96B36 256 aa21.5■■□□□ 1.03
CHRNA4-212ENST00000628665 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
CHRNA4-212ENST00000628665 PAPPAQ13219 1627 aa21.5■■□□□ 1.03
CHRNA4-212ENST00000628665 PALLDQ8WX93 1383 aa21.49■■□□□ 1.03
CHRNA4-212ENST00000628665 DIAPH1O60610 1272 aaKnown RBP21.49■■□□□ 1.03
CHRNA4-212ENST00000628665 MTFR1LQ9H019 292 aa21.49■■□□□ 1.03
CHRNA4-212ENST00000628665 TOGARAM1Q9Y4F4 1720 aa21.48■■□□□ 1.03
CHRNA4-212ENST00000628665 DCAF5Q96JK2 942 aa21.47■■□□□ 1.03
CHRNA4-212ENST00000628665 ERVV-2B6SEH9 535 aa21.46■■□□□ 1.03
CHRNA4-212ENST00000628665 SLC16A10Q8TF71 515 aa21.45■■□□□ 1.02
CHRNA4-212ENST00000628665 KDRP35968 1356 aa21.45■■□□□ 1.02
CHRNA4-212ENST00000628665 MSH5O43196 834 aa21.44■■□□□ 1.02
CHRNA4-212ENST00000628665 CFAP53Q96M91 514 aa21.44■■□□□ 1.02
CHRNA4-212ENST00000628665 DCAF8L1A6NGE4 600 aa21.43■■□□□ 1.02
CHRNA4-212ENST00000628665 HMOX1P09601 288 aa21.43■■□□□ 1.02
CHRNA4-212ENST00000628665 CABP4P57796 275 aa21.43■■□□□ 1.02
CHRNA4-212ENST00000628665 U2SURPO15042 1029 aaKnown RBP21.42■■□□□ 1.02
CHRNA4-212ENST00000628665 QSER1Q2KHR3 1735 aa21.42■■□□□ 1.02
CHRNA4-212ENST00000628665 ASAP1Q9ULH1 1129 aa21.42■■□□□ 1.02
CHRNA4-212ENST00000628665 PNPLA7Q6ZV29 1317 aa21.41■■□□□ 1.02
CHRNA4-212ENST00000628665 LOC102724428A0A0B4J2F2 783 aa21.41■■□□□ 1.02
CHRNA4-212ENST00000628665 PTGER2P43116 358 aa21.41■■□□□ 1.02
CHRNA4-212ENST00000628665 SIK1P57059 783 aa21.41■■□□□ 1.02
CHRNA4-212ENST00000628665 POLD1P28340 1107 aa21.4■■□□□ 1.02
CHRNA4-212ENST00000628665 FLAD1Q8NFF5 587 aa21.4■■□□□ 1.02
CHRNA4-212ENST00000628665 AK7Q96M32 723 aa21.4■■□□□ 1.02
CHRNA4-212ENST00000628665 C5P01031 1676 aa21.4■■□□□ 1.02
CHRNA4-212ENST00000628665 AKAP4Q5JQC9 854 aa21.39■■□□□ 1.01
CHRNA4-212ENST00000628665 ATP6V1AP38606 617 aa21.38■■□□□ 1.01
CHRNA4-212ENST00000628665 ATG3Q9NT62 314 aa21.38■■□□□ 1.01
CHRNA4-212ENST00000628665 NUDCQ9Y266 331 aa21.38■■□□□ 1.01
CHRNA4-212ENST00000628665 TAF1LQ8IZX4 1826 aa21.38■■□□□ 1.01
CHRNA4-212ENST00000628665 TUBGCP6Q96RT7 1819 aa21.37■■□□□ 1.01
CHRNA4-212ENST00000628665 ARXQ96QS3 562 aa21.37■■□□□ 1.01
CHRNA4-212ENST00000628665 RBM42Q9BTD8 480 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms