RNA–Protein interactions for RNA: ENST00000628636.2

TCF4-265, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-265ENST00000628636 DOT1LQ8TEK3 1739 aa12.48□□□□□ -0.41
TCF4-265ENST00000628636 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
TCF4-265ENST00000628636 PRIM1P49642 420 aaKnown RBP12.47□□□□□ -0.41
TCF4-265ENST00000628636 ANKRD36BQ8N2N9 1353 aa12.46□□□□□ -0.41
TCF4-265ENST00000628636 KIAA1210Q9ULL0 1709 aa12.46□□□□□ -0.41
TCF4-265ENST00000628636 RBM46Q8TBY0 533 aaKnown RBP12.46□□□□□ -0.41
TCF4-265ENST00000628636 CICQ96RK0 1608 aaPredicted RBP12.46□□□□□ -0.41
TCF4-265ENST00000628636 LTN1O94822 1766 aa12.46□□□□□ -0.42
TCF4-265ENST00000628636 C5P01031 1676 aa12.45□□□□□ -0.42
TCF4-265ENST00000628636 TTC21AQ8NDW8 1320 aa12.45□□□□□ -0.42
TCF4-265ENST00000628636 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
TCF4-265ENST00000628636 C16orf71Q8IYS4 520 aaPredicted RBP12.45□□□□□ -0.42
TCF4-265ENST00000628636 FLAD1Q8NFF5 587 aa12.45□□□□□ -0.42
TCF4-265ENST00000628636 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
TCF4-265ENST00000628636 NMRK2Q9NPI5 230 aa12.45□□□□□ -0.42
TCF4-265ENST00000628636 ANKRD24Q8TF21 1146 aa12.44□□□□□ -0.42
TCF4-265ENST00000628636 NSD2O96028 1365 aa12.43□□□□□ -0.42
TCF4-265ENST00000628636 FSTL1Q12841 308 aa12.43□□□□□ -0.42
TCF4-265ENST00000628636 USP47Q96K76 1375 aa12.43□□□□□ -0.42
TCF4-265ENST00000628636 USP54Q70EL1 1684 aa12.42□□□□□ -0.42
TCF4-265ENST00000628636 TAF1LQ8IZX4 1826 aa12.42□□□□□ -0.42
TCF4-265ENST00000628636 HMGB2P26583 209 aaKnown RBP12.41□□□□□ -0.42
TCF4-265ENST00000628636 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
TCF4-265ENST00000628636 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
TCF4-265ENST00000628636 NBPF1Q3BBV0 1214 aa12.4□□□□□ -0.42
TCF4-265ENST00000628636 FAM208AQ9UK61 1670 aaKnown RBP12.39□□□□□ -0.43
TCF4-265ENST00000628636 EVC2Q86UK5 1308 aa12.38□□□□□ -0.43
TCF4-265ENST00000628636 PCDH10Q9P2E7 1040 aa12.38□□□□□ -0.43
TCF4-265ENST00000628636 KTN1Q86UP2 1357 aaKnown RBP12.38□□□□□ -0.43
TCF4-265ENST00000628636 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
TCF4-265ENST00000628636 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
TCF4-265ENST00000628636 ARHGAP27Q6ZUM4 889 aa12.37□□□□□ -0.43
TCF4-265ENST00000628636 AK7Q96M32 723 aa12.37□□□□□ -0.43
TCF4-265ENST00000628636 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
TCF4-265ENST00000628636 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
TCF4-265ENST00000628636 MON2Q7Z3U7 1717 aa12.37□□□□□ -0.43
TCF4-265ENST00000628636 USP31Q70CQ4 1352 aa12.36□□□□□ -0.43
TCF4-265ENST00000628636 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
TCF4-265ENST00000628636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.36□□□□□ -0.43
TCF4-265ENST00000628636 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
TCF4-265ENST00000628636 KIF13BQ9NQT8 1826 aa12.36□□□□□ -0.43
TCF4-265ENST00000628636 TOGARAM1Q9Y4F4 1720 aa12.36□□□□□ -0.43
TCF4-265ENST00000628636 PKD1L3Q7Z443 1732 aa12.35□□□□□ -0.43
TCF4-265ENST00000628636 PHF14O94880 888 aa12.35□□□□□ -0.43
TCF4-265ENST00000628636 NSD3Q9BZ95 1437 aa12.35□□□□□ -0.43
TCF4-265ENST00000628636 KDM2BQ8NHM5 1336 aa12.35□□□□□ -0.43
TCF4-265ENST00000628636 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
TCF4-265ENST00000628636 KIAA1551Q9HCM1 1747 aa12.34□□□□□ -0.43
TCF4-265ENST00000628636 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.34□□□□□ -0.43
TCF4-265ENST00000628636 SMC1BQ8NDV3 1235 aa12.34□□□□□ -0.43
TCF4-265ENST00000628636 LTV1Q96GA3 475 aaPredicted RBP12.34□□□□□ -0.43
TCF4-265ENST00000628636 TNRC6CQ9HCJ0 1690 aaKnown RBP12.34□□□□□ -0.43
TCF4-265ENST00000628636 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
TCF4-265ENST00000628636 KCPQ6ZWJ8 1503 aa12.33□□□□□ -0.44
TCF4-265ENST00000628636 TGFB2P61812 414 aa12.33□□□□□ -0.44
TCF4-265ENST00000628636 C9orf131Q5VYM1 1079 aa12.33□□□□□ -0.44
TCF4-265ENST00000628636 AMIGO3Q86WK7 504 aa12.33□□□□□ -0.44
TCF4-265ENST00000628636 RRAGCQ9HB90 399 aa12.33□□□□□ -0.44
TCF4-265ENST00000628636 C10orf71Q711Q0 1435 aa12.33□□□□□ -0.44
TCF4-265ENST00000628636 RGPD2P0DJD1 1756 aa12.33□□□□□ -0.44
TCF4-265ENST00000628636 RAB3GAP2Q9H2M9 1393 aa12.32□□□□□ -0.44
TCF4-265ENST00000628636 FCHSD2O94868 740 aa12.32□□□□□ -0.44
TCF4-265ENST00000628636 SMIM5Q71RC9 77 aa12.32□□□□□ -0.44
TCF4-265ENST00000628636 NME9Q86XW9 330 aa12.32□□□□□ -0.44
TCF4-265ENST00000628636 IP6K1Q92551 441 aa12.32□□□□□ -0.44
TCF4-265ENST00000628636 BRCA1P38398 1863 aaKnown RBP12.31□□□□□ -0.44
TCF4-265ENST00000628636 A0A0G2JLW4 131 aa12.31□□□□□ -0.44
TCF4-265ENST00000628636 SSFA2P28290 1259 aa12.31□□□□□ -0.44
TCF4-265ENST00000628636 ARFGEF1Q9Y6D6 1849 aa12.31□□□□□ -0.44
TCF4-265ENST00000628636 MEGF6O75095 1541 aa12.31□□□□□ -0.44
TCF4-265ENST00000628636 MMP10P09238 476 aa12.29□□□□□ -0.44
TCF4-265ENST00000628636 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
TCF4-265ENST00000628636 SMARCC1Q92922 1105 aaPredicted RBP12.29□□□□□ -0.44
TCF4-265ENST00000628636 ITGB4P16144 1822 aa12.29□□□□□ -0.44
TCF4-265ENST00000628636 SBF1O95248 1867 aa12.28□□□□□ -0.44
TCF4-265ENST00000628636 RNF181Q9P0P0 153 aa12.28□□□□□ -0.44
TCF4-265ENST00000628636 SBNO2Q9Y2G9 1366 aa12.28□□□□□ -0.44
TCF4-265ENST00000628636 DPEP1P16444 411 aa12.27□□□□□ -0.45
TCF4-265ENST00000628636 CGNL1Q0VF96 1302 aa12.27□□□□□ -0.45
TCF4-265ENST00000628636 CCDC87Q9NVE4 849 aa12.26□□□□□ -0.45
TCF4-265ENST00000628636 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
TCF4-265ENST00000628636 GNPATO15228 680 aa12.25□□□□□ -0.45
TCF4-265ENST00000628636 FAM161AQ3B820 660 aa12.25□□□□□ -0.45
TCF4-265ENST00000628636 LINC00116Q8NCU8 138 aa12.25□□□□□ -0.45
TCF4-265ENST00000628636 RAPGEF4Q8WZA2 1011 aa12.25□□□□□ -0.45
TCF4-265ENST00000628636 HOXC9P31274 260 aa12.24□□□□□ -0.45
TCF4-265ENST00000628636 AMPHP49418 695 aa12.24□□□□□ -0.45
TCF4-265ENST00000628636 EDC4Q6P2E9 1401 aaKnown RBP12.24□□□□□ -0.45
TCF4-265ENST00000628636 HDGFL2Q7Z4V5 671 aaPredicted RBP12.24□□□□□ -0.45
TCF4-265ENST00000628636 PCDH11XQ9BZA7 1347 aa12.24□□□□□ -0.45
TCF4-265ENST00000628636 PCDH11YQ9BZA8 1340 aa12.24□□□□□ -0.45
TCF4-265ENST00000628636 PRDM10Q9NQV6 1147 aa12.24□□□□□ -0.45
TCF4-265ENST00000628636 CD163L1Q9NR16 1453 aa12.24□□□□□ -0.45
TCF4-265ENST00000628636 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
TCF4-265ENST00000628636 LOC102724428A0A0B4J2F2 783 aa12.23□□□□□ -0.45
TCF4-265ENST00000628636 VEGFAP15692 232 aaPredicted RBP12.23□□□□□ -0.45
TCF4-265ENST00000628636 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
TCF4-265ENST00000628636 SIK1P57059 783 aa12.23□□□□□ -0.45
TCF4-265ENST00000628636 TMF1P82094 1093 aa12.23□□□□□ -0.45
TCF4-265ENST00000628636 NLGN1Q8N2Q7 840 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms