RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 NCAPD2Q15021 1401 aa17.53■□□□□ 0.4
PDXDC1-218ENST00000627450 LMO7Q8WWI1 1683 aa17.53■□□□□ 0.4
PDXDC1-218ENST00000627450 RRP1P56182 461 aaKnown RBP17.53■□□□□ 0.4
PDXDC1-218ENST00000627450 LARP1Q6PKG0 1096 aaKnown RBP17.53■□□□□ 0.4
PDXDC1-218ENST00000627450 USP35Q9P2H5 1018 aa17.53■□□□□ 0.4
PDXDC1-218ENST00000627450 COL5A2P05997 1499 aaPredicted RBP17.53■□□□□ 0.4
PDXDC1-218ENST00000627450 GNAT3A8MTJ3 354 aa17.53■□□□□ 0.4
PDXDC1-218ENST00000627450 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
PDXDC1-218ENST00000627450 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
PDXDC1-218ENST00000627450 EVA1CP58658 441 aa17.52■□□□□ 0.39
PDXDC1-218ENST00000627450 IL17REQ8NFR9 667 aa17.52■□□□□ 0.39
PDXDC1-218ENST00000627450 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.39
PDXDC1-218ENST00000627450 ELL2O00472 640 aaPredicted RBP17.51■□□□□ 0.39
PDXDC1-218ENST00000627450 ZNF530Q6P9A1 599 aaPredicted RBP17.51■□□□□ 0.39
PDXDC1-218ENST00000627450 RAPGEF4Q8WZA2 1011 aa17.51■□□□□ 0.39
PDXDC1-218ENST00000627450 ZNF853P0CG23 659 aa17.51■□□□□ 0.39
PDXDC1-218ENST00000627450 CFAP44Q96MT7 982 aa17.51■□□□□ 0.39
PDXDC1-218ENST00000627450 IFT57Q9NWB7 429 aa17.51■□□□□ 0.39
PDXDC1-218ENST00000627450 MEGF6O75095 1541 aa17.51■□□□□ 0.39
PDXDC1-218ENST00000627450 LGR6Q9HBX8 967 aa17.5■□□□□ 0.39
PDXDC1-218ENST00000627450 FAM208AQ9UK61 1670 aaKnown RBP17.5■□□□□ 0.39
PDXDC1-218ENST00000627450 MAP3K5Q99683 1374 aa17.5■□□□□ 0.39
PDXDC1-218ENST00000627450 GNAI1P63096 354 aa17.5■□□□□ 0.39
PDXDC1-218ENST00000627450 PLEKHO1Q53GL0 409 aaPredicted RBP17.5■□□□□ 0.39
PDXDC1-218ENST00000627450 COL22A1Q8NFW1 1626 aaPredicted RBP17.49■□□□□ 0.39
PDXDC1-218ENST00000627450 ABCC6O95255 1503 aa17.49■□□□□ 0.39
PDXDC1-218ENST00000627450 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
PDXDC1-218ENST00000627450 MPRIPQ6WCQ1 1025 aa17.49■□□□□ 0.39
PDXDC1-218ENST00000627450 KRT24Q2M2I5 525 aa17.49■□□□□ 0.39
PDXDC1-218ENST00000627450 TSPYL6Q8N831 410 aa17.49■□□□□ 0.39
PDXDC1-218ENST00000627450 CRB1P82279 1406 aa17.48■□□□□ 0.39
PDXDC1-218ENST00000627450 RARSP54136 660 aaKnown RBP17.48■□□□□ 0.39
PDXDC1-218ENST00000627450 C20orf194Q5TEA3 1177 aa17.48■□□□□ 0.39
PDXDC1-218ENST00000627450 TATP17735 454 aaPredicted RBP17.47■□□□□ 0.39
PDXDC1-218ENST00000627450 AMOTQ4VCS5 1084 aa17.47■□□□□ 0.39
PDXDC1-218ENST00000627450 CHL1O00533 1208 aa17.46■□□□□ 0.39
PDXDC1-218ENST00000627450 C8orf58Q8NAV2 365 aa17.46■□□□□ 0.39
PDXDC1-218ENST00000627450 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
PDXDC1-218ENST00000627450 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
PDXDC1-218ENST00000627450 TCERG1O14776 1098 aaKnown RBP17.44■□□□□ 0.38
PDXDC1-218ENST00000627450 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
PDXDC1-218ENST00000627450 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
PDXDC1-218ENST00000627450 HSPA1LP34931 641 aa17.44■□□□□ 0.38
PDXDC1-218ENST00000627450 CARD10Q9BWT7 1032 aa17.44■□□□□ 0.38
PDXDC1-218ENST00000627450 TSPYL4Q9UJ04 414 aa17.44■□□□□ 0.38
PDXDC1-218ENST00000627450 CYP27B1O15528 508 aa17.43■□□□□ 0.38
PDXDC1-218ENST00000627450 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
PDXDC1-218ENST00000627450 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
PDXDC1-218ENST00000627450 VAMP4O75379 141 aa17.42■□□□□ 0.38
PDXDC1-218ENST00000627450 EXOC6Q8TAG9 804 aa17.42■□□□□ 0.38
PDXDC1-218ENST00000627450 TNNQ9UQP3 1299 aa17.42■□□□□ 0.38
PDXDC1-218ENST00000627450 CEMIPQ8WUJ3 1361 aa17.41■□□□□ 0.38
PDXDC1-218ENST00000627450 TWISTNBQ3B726 338 aaPredicted RBP17.41■□□□□ 0.38
PDXDC1-218ENST00000627450 SPG7Q9UQ90 795 aa17.41■□□□□ 0.38
PDXDC1-218ENST00000627450 RNMTO43148 476 aaKnown RBP17.41■□□□□ 0.38
PDXDC1-218ENST00000627450 PHKG2P15735 406 aa17.41■□□□□ 0.38
PDXDC1-218ENST00000627450 SMC4Q9NTJ3 1288 aa17.41■□□□□ 0.38
PDXDC1-218ENST00000627450 JCADQ9P266 1359 aa17.4■□□□□ 0.38
PDXDC1-218ENST00000627450 IL2RBP14784 551 aa17.4■□□□□ 0.38
PDXDC1-218ENST00000627450 TAF7Q15545 349 aaPredicted RBP17.4■□□□□ 0.38
PDXDC1-218ENST00000627450 LRRC37A3O60309 1634 aa17.4■□□□□ 0.38
PDXDC1-218ENST00000627450 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
PDXDC1-218ENST00000627450 TEFQ10587 303 aa17.39■□□□□ 0.37
PDXDC1-218ENST00000627450 VIRMAQ69YN4 1812 aaKnown RBP17.39■□□□□ 0.37
PDXDC1-218ENST00000627450 CANXP27824 592 aaKnown RBP17.39■□□□□ 0.37
PDXDC1-218ENST00000627450 CRBNQ96SW2 442 aa17.39■□□□□ 0.37
PDXDC1-218ENST00000627450 OVOS2A0A0G2JMS6 1433 aa17.39■□□□□ 0.37
PDXDC1-218ENST00000627450 KCNQ3O43525 872 aa17.38■□□□□ 0.37
PDXDC1-218ENST00000627450 IFNL2Q8IZJ0 200 aa17.38■□□□□ 0.37
PDXDC1-218ENST00000627450 ZCRB1Q8TBF4 217 aaKnown RBP17.38■□□□□ 0.37
PDXDC1-218ENST00000627450 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
PDXDC1-218ENST00000627450 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.38■□□□□ 0.371e-7■■■□□ 14.6
PDXDC1-218ENST00000627450 PLCH1Q4KWH8 1693 aa17.38■□□□□ 0.37
PDXDC1-218ENST00000627450 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
PDXDC1-218ENST00000627450 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
PDXDC1-218ENST00000627450 KDM6AO15550 1401 aaPredicted RBP17.37■□□□□ 0.37
PDXDC1-218ENST00000627450 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.37■□□□□ 0.37
PDXDC1-218ENST00000627450 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
PDXDC1-218ENST00000627450 NGLY1Q96IV0 654 aa17.36■□□□□ 0.37
PDXDC1-218ENST00000627450 B4GALNT3Q6L9W6 998 aa17.36■□□□□ 0.37
PDXDC1-218ENST00000627450 BTBD11A6QL63 1104 aa17.35■□□□□ 0.37
PDXDC1-218ENST00000627450 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
PDXDC1-218ENST00000627450 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
PDXDC1-218ENST00000627450 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
PDXDC1-218ENST00000627450 NOB1Q9ULX3 412 aaKnown RBP17.35■□□□□ 0.37
PDXDC1-218ENST00000627450 LRP6O75581 1613 aa17.35■□□□□ 0.37
PDXDC1-218ENST00000627450 RLBP1P12271 317 aa17.34■□□□□ 0.37
PDXDC1-218ENST00000627450 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
PDXDC1-218ENST00000627450 PARP4Q9UKK3 1724 aaKnown RBP17.34■□□□□ 0.37
PDXDC1-218ENST00000627450 SLC39A6Q13433 755 aa17.33■□□□□ 0.36
PDXDC1-218ENST00000627450 PCDH11XQ9BZA7 1347 aa17.33■□□□□ 0.36
PDXDC1-218ENST00000627450 PCDH11YQ9BZA8 1340 aa17.33■□□□□ 0.36
PDXDC1-218ENST00000627450 SLIT2O94813 1529 aa17.33■□□□□ 0.36
PDXDC1-218ENST00000627450 PPP4R2Q9NY27 417 aa17.33■□□□□ 0.36
PDXDC1-218ENST00000627450 COG6Q9Y2V7 657 aa17.33■□□□□ 0.36
PDXDC1-218ENST00000627450 KAT6BQ8WYB5 2073 aa17.32■□□□□ 0.36
PDXDC1-218ENST00000627450 DCAF5Q96JK2 942 aa17.32■□□□□ 0.36
PDXDC1-218ENST00000627450 NRAPQ86VF7 1730 aa17.32■□□□□ 0.36
PDXDC1-218ENST00000627450 TRIM27P14373 513 aa17.32■□□□□ 0.36
PDXDC1-218ENST00000627450 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms