RNA–Protein interactions for RNA: ENST00000626802.2

SOX2-OT-240, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 737 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-240ENST00000626802 AMPHP49418 695 aa16.99■□□□□ 0.31
SOX2-OT-240ENST00000626802 LRRC4BQ9NT99 713 aa16.99■□□□□ 0.31
SOX2-OT-240ENST00000626802 NSD2O96028 1365 aa16.99■□□□□ 0.31
SOX2-OT-240ENST00000626802 TMF1P82094 1093 aa16.98■□□□□ 0.31
SOX2-OT-240ENST00000626802 FYB1O15117 783 aa16.97■□□□□ 0.31
SOX2-OT-240ENST00000626802 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
SOX2-OT-240ENST00000626802 YY1P25490 414 aa16.96■□□□□ 0.31
SOX2-OT-240ENST00000626802 UTRNP46939 3433 aa16.96■□□□□ 0.31
SOX2-OT-240ENST00000626802 UBR3Q6ZT12 1888 aa16.95■□□□□ 0.3
SOX2-OT-240ENST00000626802 KCNQ4P56696 695 aa16.95■□□□□ 0.3
SOX2-OT-240ENST00000626802 SGIP1Q9BQI5 828 aa16.95■□□□□ 0.3
SOX2-OT-240ENST00000626802 VIRMAQ69YN4 1812 aaKnown RBP16.95■□□□□ 0.3
SOX2-OT-240ENST00000626802 NSD3Q9BZ95 1437 aa16.95■□□□□ 0.3
SOX2-OT-240ENST00000626802 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
SOX2-OT-240ENST00000626802 SYTL4Q96C24 671 aaPredicted RBP16.94■□□□□ 0.3
SOX2-OT-240ENST00000626802 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
SOX2-OT-240ENST00000626802 MTFR1LQ9H019 292 aa16.94■□□□□ 0.3
SOX2-OT-240ENST00000626802 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
SOX2-OT-240ENST00000626802 FHDC1Q9C0D6 1143 aaPredicted RBP16.93■□□□□ 0.3
SOX2-OT-240ENST00000626802 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
SOX2-OT-240ENST00000626802 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
SOX2-OT-240ENST00000626802 ZCRB1Q8TBF4 217 aaKnown RBP16.92■□□□□ 0.3
SOX2-OT-240ENST00000626802 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
SOX2-OT-240ENST00000626802 AKT1S1Q96B36 256 aa16.91■□□□□ 0.3
SOX2-OT-240ENST00000626802 INSRP06213 1382 aa16.9■□□□□ 0.3
SOX2-OT-240ENST00000626802 FLT4P35916 1363 aa16.9■□□□□ 0.3
SOX2-OT-240ENST00000626802 C4BP0C0L5 1744 aa16.9■□□□□ 0.3
SOX2-OT-240ENST00000626802 SYT17Q9BSW7 474 aa16.9■□□□□ 0.3
SOX2-OT-240ENST00000626802 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
SOX2-OT-240ENST00000626802 PNPLA7Q6ZV29 1317 aa16.9■□□□□ 0.3
SOX2-OT-240ENST00000626802 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
SOX2-OT-240ENST00000626802 DCAF8L1A6NGE4 600 aa16.88■□□□□ 0.29
SOX2-OT-240ENST00000626802 SLC27A3Q5K4L6 730 aa16.88■□□□□ 0.29
SOX2-OT-240ENST00000626802 ARXQ96QS3 562 aa16.87■□□□□ 0.29
SOX2-OT-240ENST00000626802 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
SOX2-OT-240ENST00000626802 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
SOX2-OT-240ENST00000626802 KIF24Q5T7B8 1368 aa16.86■□□□□ 0.29
SOX2-OT-240ENST00000626802 TATP17735 454 aaPredicted RBP16.85■□□□□ 0.29
SOX2-OT-240ENST00000626802 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
SOX2-OT-240ENST00000626802 KLHL34Q8N239 644 aa16.84■□□□□ 0.29
SOX2-OT-240ENST00000626802 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
SOX2-OT-240ENST00000626802 TFCP2L1Q9NZI6 479 aa16.84■□□□□ 0.29
SOX2-OT-240ENST00000626802 CCNL1Q9UK58 526 aaPredicted RBP16.84■□□□□ 0.29
SOX2-OT-240ENST00000626802 CGNL1Q0VF96 1302 aa16.84■□□□□ 0.29
SOX2-OT-240ENST00000626802 PCDH11XQ9BZA7 1347 aa16.84■□□□□ 0.29
SOX2-OT-240ENST00000626802 PCDH11YQ9BZA8 1340 aa16.84■□□□□ 0.29
SOX2-OT-240ENST00000626802 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
SOX2-OT-240ENST00000626802 GOLGB1Q14789 3259 aaKnown RBP16.84■□□□□ 0.29
SOX2-OT-240ENST00000626802 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
SOX2-OT-240ENST00000626802 CYP27B1O15528 508 aa16.82■□□□□ 0.28
SOX2-OT-240ENST00000626802 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
SOX2-OT-240ENST00000626802 PALLDQ8WX93 1383 aa16.81■□□□□ 0.28
SOX2-OT-240ENST00000626802 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
SOX2-OT-240ENST00000626802 SLC16A10Q8TF71 515 aa16.8■□□□□ 0.28
SOX2-OT-240ENST00000626802 MPRIPQ6WCQ1 1025 aa16.79■□□□□ 0.28
SOX2-OT-240ENST00000626802 COL23A1Q86Y22 540 aaPredicted RBP16.79■□□□□ 0.28
SOX2-OT-240ENST00000626802 SCN11AQ9UI33 1791 aa16.79■□□□□ 0.28
SOX2-OT-240ENST00000626802 C4AP0C0L4 1744 aa16.79■□□□□ 0.28
SOX2-OT-240ENST00000626802 POLD1P28340 1107 aa16.78■□□□□ 0.28
SOX2-OT-240ENST00000626802 NLGN2Q8NFZ4 835 aa16.78■□□□□ 0.28
SOX2-OT-240ENST00000626802 MYH14Q7Z406 1995 aaKnown RBP16.78■□□□□ 0.28
SOX2-OT-240ENST00000626802 MSH5O43196 834 aa16.77■□□□□ 0.28
SOX2-OT-240ENST00000626802 MSL1Q68DK7 614 aa16.77■□□□□ 0.28
SOX2-OT-240ENST00000626802 TIMELESSQ9UNS1 1208 aa16.77■□□□□ 0.28
SOX2-OT-240ENST00000626802 WASHC2AQ641Q2 1341 aa16.76■□□□□ 0.27
SOX2-OT-240ENST00000626802 CLSPNQ9HAW4 1339 aa16.76■□□□□ 0.27
SOX2-OT-240ENST00000626802 ZNF831Q5JPB2 1677 aa16.76■□□□□ 0.27
SOX2-OT-240ENST00000626802 KIF13BQ9NQT8 1826 aa16.76■□□□□ 0.27
SOX2-OT-240ENST00000626802 TNNT2P45379 298 aaPredicted RBP16.76■□□□□ 0.27
SOX2-OT-240ENST00000626802 ZNF784Q8NCA9 323 aaPredicted RBP16.76■□□□□ 0.27
SOX2-OT-240ENST00000626802 EYA1Q99502 592 aa16.76■□□□□ 0.27
SOX2-OT-240ENST00000626802 N4BP2Q86UW6 1770 aaPredicted RBP16.76■□□□□ 0.27
SOX2-OT-240ENST00000626802 KIAA1551Q9HCM1 1747 aa16.76■□□□□ 0.27
SOX2-OT-240ENST00000626802 AMIGO3Q86WK7 504 aa16.75■□□□□ 0.27
SOX2-OT-240ENST00000626802 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
SOX2-OT-240ENST00000626802 POLKQ9UBT6 870 aa16.75■□□□□ 0.27
SOX2-OT-240ENST00000626802 HSPA5P11021 654 aaKnown RBP16.74■□□□□ 0.27
SOX2-OT-240ENST00000626802 SMIM5Q71RC9 77 aa16.74■□□□□ 0.27
SOX2-OT-240ENST00000626802 GPR162Q16538 588 aa16.73■□□□□ 0.27
SOX2-OT-240ENST00000626802 PIGBQ92521 554 aa16.73■□□□□ 0.27
SOX2-OT-240ENST00000626802 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
SOX2-OT-240ENST00000626802 TJP1Q07157 1748 aa16.73■□□□□ 0.27
SOX2-OT-240ENST00000626802 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
SOX2-OT-240ENST00000626802 ADRA2BP18089 450 aa16.71■□□□□ 0.27
SOX2-OT-240ENST00000626802 PIAS4Q8N2W9 510 aaPredicted RBP16.71■□□□□ 0.27
SOX2-OT-240ENST00000626802 SPG7Q9UQ90 795 aa16.71■□□□□ 0.27
SOX2-OT-240ENST00000626802 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
SOX2-OT-240ENST00000626802 PHF14O94880 888 aa16.69■□□□□ 0.26
SOX2-OT-240ENST00000626802 PHKG2P15735 406 aa16.69■□□□□ 0.26
SOX2-OT-240ENST00000626802 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
SOX2-OT-240ENST00000626802 EIF4G2P78344 907 aaKnown RBP eCLIP16.69■□□□□ 0.26
SOX2-OT-240ENST00000626802 LINC00116Q8NCU8 138 aa16.69■□□□□ 0.26
SOX2-OT-240ENST00000626802 AK7Q96M32 723 aa16.69■□□□□ 0.26
SOX2-OT-240ENST00000626802 PANK3Q9H999 370 aa16.69■□□□□ 0.26
SOX2-OT-240ENST00000626802 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
SOX2-OT-240ENST00000626802 ASAP1Q9ULH1 1129 aa16.68■□□□□ 0.26
SOX2-OT-240ENST00000626802 IGSF1Q8N6C5 1336 aa16.68■□□□□ 0.26
SOX2-OT-240ENST00000626802 CICQ96RK0 1608 aaPredicted RBP16.67■□□□□ 0.26
SOX2-OT-240ENST00000626802 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
SOX2-OT-240ENST00000626802 KDM6AO15550 1401 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms