RNA–Protein interactions for RNA: ENST00000626619.2

SOX2-OT-239, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 660 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-239ENST00000626619 SHANK3Q9BYB0 1731 aa18.95■□□□□ 0.62
SOX2-OT-239ENST00000626619 WASHC2AQ641Q2 1341 aa18.95■□□□□ 0.62
SOX2-OT-239ENST00000626619 NSD2O96028 1365 aa18.94■□□□□ 0.62
SOX2-OT-239ENST00000626619 LRP5O75197 1615 aa18.94■□□□□ 0.62
SOX2-OT-239ENST00000626619 KCNQ4P56696 695 aa18.94■□□□□ 0.62
SOX2-OT-239ENST00000626619 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
SOX2-OT-239ENST00000626619 RAPGEF4Q8WZA2 1011 aa18.94■□□□□ 0.62
SOX2-OT-239ENST00000626619 ANKRD26Q9UPS8 1709 aa18.94■□□□□ 0.62
SOX2-OT-239ENST00000626619 PRIM1P49642 420 aaKnown RBP18.93■□□□□ 0.62
SOX2-OT-239ENST00000626619 EIF4A2Q14240 407 aaKnown RBP18.93■□□□□ 0.62
SOX2-OT-239ENST00000626619 SYTL4Q96C24 671 aaPredicted RBP18.93■□□□□ 0.62
SOX2-OT-239ENST00000626619 EYA1Q99502 592 aa18.93■□□□□ 0.62
SOX2-OT-239ENST00000626619 RGPD3A6NKT7 1758 aaPredicted RBP18.92■□□□□ 0.62
SOX2-OT-239ENST00000626619 RGPD4Q7Z3J3 1758 aa18.92■□□□□ 0.62
SOX2-OT-239ENST00000626619 TATP17735 454 aaPredicted RBP18.92■□□□□ 0.62
SOX2-OT-239ENST00000626619 LRRC4BQ9NT99 713 aa18.92■□□□□ 0.62
SOX2-OT-239ENST00000626619 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
SOX2-OT-239ENST00000626619 CYP27B1O15528 508 aa18.91■□□□□ 0.62
SOX2-OT-239ENST00000626619 MSH5O43196 834 aa18.91■□□□□ 0.62
SOX2-OT-239ENST00000626619 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
SOX2-OT-239ENST00000626619 MORC1Q86VD1 984 aa18.9■□□□□ 0.62
SOX2-OT-239ENST00000626619 DOT1LQ8TEK3 1739 aa18.89■□□□□ 0.61
SOX2-OT-239ENST00000626619 BTAF1O14981 1849 aa18.89■□□□□ 0.61
SOX2-OT-239ENST00000626619 ZNF827Q17R98 1081 aa18.89■□□□□ 0.61
SOX2-OT-239ENST00000626619 KNSTRNQ9Y448 316 aa18.88■□□□□ 0.61
SOX2-OT-239ENST00000626619 CNGB1Q14028 1251 aaPredicted RBP18.87■□□□□ 0.61
SOX2-OT-239ENST00000626619 PAPPAQ13219 1627 aa18.86■□□□□ 0.61
SOX2-OT-239ENST00000626619 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
SOX2-OT-239ENST00000626619 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
SOX2-OT-239ENST00000626619 SLC15A2Q16348 729 aa18.86■□□□□ 0.61
SOX2-OT-239ENST00000626619 PER1O15534 1290 aaPredicted RBP18.85■□□□□ 0.61
SOX2-OT-239ENST00000626619 ZBTB7AO95365 584 aa18.85■□□□□ 0.61
SOX2-OT-239ENST00000626619 STK32BQ9NY57 414 aa18.85■□□□□ 0.61
SOX2-OT-239ENST00000626619 CC2D1BQ5T0F9 858 aaKnown RBP18.84■□□□□ 0.61
SOX2-OT-239ENST00000626619 AEBP1Q8IUX7 1158 aa18.84■□□□□ 0.61
SOX2-OT-239ENST00000626619 MAP2P11137 1827 aaKnown RBP18.84■□□□□ 0.61
SOX2-OT-239ENST00000626619 IGSF1Q8N6C5 1336 aa18.83■□□□□ 0.61
SOX2-OT-239ENST00000626619 CASZ1Q86V15 1759 aa18.83■□□□□ 0.6
SOX2-OT-239ENST00000626619 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.6
SOX2-OT-239ENST00000626619 PKD1L3Q7Z443 1732 aa18.81■□□□□ 0.6
SOX2-OT-239ENST00000626619 ATF5Q9Y2D1 282 aaPredicted RBP18.81■□□□□ 0.6
SOX2-OT-239ENST00000626619 MPRIPQ6WCQ1 1025 aa18.8■□□□□ 0.6
SOX2-OT-239ENST00000626619 AKT1S1Q96B36 256 aa18.8■□□□□ 0.6
SOX2-OT-239ENST00000626619 SPON1Q9HCB6 807 aa18.8■□□□□ 0.6
SOX2-OT-239ENST00000626619 PHKG2P15735 406 aa18.78■□□□□ 0.6
SOX2-OT-239ENST00000626619 PTGER2P43116 358 aa18.78■□□□□ 0.6
SOX2-OT-239ENST00000626619 PIGBQ92521 554 aa18.78■□□□□ 0.6
SOX2-OT-239ENST00000626619 SPG7Q9UQ90 795 aa18.78■□□□□ 0.6
SOX2-OT-239ENST00000626619 IL13P35225 146 aa18.77■□□□□ 0.6
SOX2-OT-239ENST00000626619 MTHFSP49914 203 aa18.77■□□□□ 0.6
SOX2-OT-239ENST00000626619 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
SOX2-OT-239ENST00000626619 CCNL1Q9UK58 526 aaPredicted RBP18.77■□□□□ 0.6
SOX2-OT-239ENST00000626619 SLC27A3Q5K4L6 730 aa18.76■□□□□ 0.59
SOX2-OT-239ENST00000626619 PALLDQ8WX93 1383 aa18.76■□□□□ 0.59
SOX2-OT-239ENST00000626619 PNPLA7Q6ZV29 1317 aa18.75■□□□□ 0.59
SOX2-OT-239ENST00000626619 SULT6B1Q6IMI4 303 aa18.74■□□□□ 0.59
SOX2-OT-239ENST00000626619 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
SOX2-OT-239ENST00000626619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.74■□□□□ 0.59
SOX2-OT-239ENST00000626619 PPP1R1BQ9UD71 204 aaPredicted RBP18.74■□□□□ 0.59
SOX2-OT-239ENST00000626619 AMIGO3Q86WK7 504 aa18.73■□□□□ 0.59
SOX2-OT-239ENST00000626619 KAT6BQ8WYB5 2073 aa18.73■□□□□ 0.59
SOX2-OT-239ENST00000626619 LY75O60449 1722 aa18.72■□□□□ 0.59
SOX2-OT-239ENST00000626619 ZNF530Q6P9A1 599 aaPredicted RBP18.72■□□□□ 0.59
SOX2-OT-239ENST00000626619 IFNL2Q8IZJ0 200 aa18.72■□□□□ 0.59
SOX2-OT-239ENST00000626619 SGIP1Q9BQI5 828 aa18.72■□□□□ 0.59
SOX2-OT-239ENST00000626619 ASAP1Q9ULH1 1129 aa18.72■□□□□ 0.59
SOX2-OT-239ENST00000626619 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
SOX2-OT-239ENST00000626619 HMOX1P09601 288 aa18.71■□□□□ 0.59
SOX2-OT-239ENST00000626619 MTFR1LQ9H019 292 aa18.71■□□□□ 0.59
SOX2-OT-239ENST00000626619 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.59
SOX2-OT-239ENST00000626619 KDRP35968 1356 aa18.7■□□□□ 0.58
SOX2-OT-239ENST00000626619 PIAS4Q8N2W9 510 aaPredicted RBP18.7■□□□□ 0.58
SOX2-OT-239ENST00000626619 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
SOX2-OT-239ENST00000626619 COL3A1P02461 1466 aaPredicted RBP18.7■□□□□ 0.58
SOX2-OT-239ENST00000626619 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
SOX2-OT-239ENST00000626619 PLEKHO1Q53GL0 409 aaPredicted RBP18.68■□□□□ 0.58
SOX2-OT-239ENST00000626619 ITPK1Q13572 414 aa18.67■□□□□ 0.58
SOX2-OT-239ENST00000626619 COL23A1Q86Y22 540 aaPredicted RBP18.67■□□□□ 0.58
SOX2-OT-239ENST00000626619 LINC00116Q8NCU8 138 aa18.67■□□□□ 0.58
SOX2-OT-239ENST00000626619 ATG3Q9NT62 314 aa18.67■□□□□ 0.58
SOX2-OT-239ENST00000626619 TUBGCP6Q96RT7 1819 aa18.67■□□□□ 0.58
SOX2-OT-239ENST00000626619 ITGB4P16144 1822 aa18.66■□□□□ 0.58
SOX2-OT-239ENST00000626619 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
SOX2-OT-239ENST00000626619 SLC4A9Q96Q91 983 aa18.66■□□□□ 0.58
SOX2-OT-239ENST00000626619 FHDC1Q9C0D6 1143 aaPredicted RBP18.66■□□□□ 0.58
SOX2-OT-239ENST00000626619 LOC102724428A0A0B4J2F2 783 aa18.65■□□□□ 0.58
SOX2-OT-239ENST00000626619 SIK1P57059 783 aa18.65■□□□□ 0.58
SOX2-OT-239ENST00000626619 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
SOX2-OT-239ENST00000626619 DIAPH1O60610 1272 aaKnown RBP18.64■□□□□ 0.57
SOX2-OT-239ENST00000626619 DCAF5Q96JK2 942 aa18.64■□□□□ 0.57
SOX2-OT-239ENST00000626619 PLEKHG2Q9H7P9 1386 aa18.64■□□□□ 0.57
SOX2-OT-239ENST00000626619 C5P01031 1676 aa18.63■□□□□ 0.57
SOX2-OT-239ENST00000626619 AMOTQ4VCS5 1084 aa18.63■□□□□ 0.57
SOX2-OT-239ENST00000626619 PHF14O94880 888 aa18.62■□□□□ 0.57
SOX2-OT-239ENST00000626619 C1orf141Q5JVX7 400 aa18.62■□□□□ 0.57
SOX2-OT-239ENST00000626619 ARXQ96QS3 562 aa18.62■□□□□ 0.57
SOX2-OT-239ENST00000626619 LGR6Q9HBX8 967 aa18.62■□□□□ 0.57
SOX2-OT-239ENST00000626619 C4BP0C0L5 1744 aa18.61■□□□□ 0.57
SOX2-OT-239ENST00000626619 ERVV-2B6SEH9 535 aa18.61■□□□□ 0.57
SOX2-OT-239ENST00000626619 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms