RNA–Protein interactions for RNA: ENST00000626177.2

CCDC163-202, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-202ENST00000626177 VAMP4O75379 141 aa11.76□□□□□ -0.53
CCDC163-202ENST00000626177 GNAI1P63096 354 aa11.76□□□□□ -0.53
CCDC163-202ENST00000626177 ARHGEF25Q86VW2 580 aa11.76□□□□□ -0.53
CCDC163-202ENST00000626177 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
CCDC163-202ENST00000626177 NOB1Q9ULX3 412 aaKnown RBP11.76□□□□□ -0.53
CCDC163-202ENST00000626177 ZC3H6P61129 1189 aaKnown RBP11.75□□□□□ -0.53
CCDC163-202ENST00000626177 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
CCDC163-202ENST00000626177 KCNH5Q8NCM2 988 aa11.75□□□□□ -0.53
CCDC163-202ENST00000626177 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
CCDC163-202ENST00000626177 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
CCDC163-202ENST00000626177 LMOD3Q0VAK6 560 aa11.75□□□□□ -0.53
CCDC163-202ENST00000626177 MSH6P52701 1360 aa11.74□□□□□ -0.53
CCDC163-202ENST00000626177 CT47B1P0C2W7 299 aaPredicted RBP11.74□□□□□ -0.53
CCDC163-202ENST00000626177 USP19O94966 1318 aa11.74□□□□□ -0.53
CCDC163-202ENST00000626177 KDM2BQ8NHM5 1336 aa11.74□□□□□ -0.53
CCDC163-202ENST00000626177 RGPD2P0DJD1 1756 aa11.74□□□□□ -0.53
CCDC163-202ENST00000626177 KIF1AQ12756 1690 aa11.74□□□□□ -0.53
CCDC163-202ENST00000626177 MED1Q15648 1581 aaPredicted RBP11.74□□□□□ -0.53
CCDC163-202ENST00000626177 NCOA3Q9Y6Q9 1424 aa11.74□□□□□ -0.53
CCDC163-202ENST00000626177 IGHDP01880 384 aa11.74□□□□□ -0.53
CCDC163-202ENST00000626177 TRIM27P14373 513 aa11.74□□□□□ -0.53
CCDC163-202ENST00000626177 CALD1Q05682 793 aaKnown RBP11.74□□□□□ -0.53
CCDC163-202ENST00000626177 ZKSCAN2Q63HK3 967 aa11.74□□□□□ -0.53
CCDC163-202ENST00000626177 SLIT3O75094 1523 aa11.73□□□□□ -0.53
CCDC163-202ENST00000626177 CRB1P82279 1406 aa11.73□□□□□ -0.53
CCDC163-202ENST00000626177 BRINP3Q76B58 766 aa11.73□□□□□ -0.53
CCDC163-202ENST00000626177 RTL1A6NKG5 1358 aa11.73□□□□□ -0.53
CCDC163-202ENST00000626177 DCCP43146 1447 aa11.73□□□□□ -0.53
CCDC163-202ENST00000626177 CHL1O00533 1208 aa11.72□□□□□ -0.53
CCDC163-202ENST00000626177 ALS2Q96Q42 1657 aa11.72□□□□□ -0.53
CCDC163-202ENST00000626177 TWISTNBQ3B726 338 aaPredicted RBP11.72□□□□□ -0.53
CCDC163-202ENST00000626177 MRPL50Q8N5N7 158 aaKnown RBP11.72□□□□□ -0.53
CCDC163-202ENST00000626177 DZIP1LQ8IYY4 767 aaKnown RBP11.71□□□□□ -0.53
CCDC163-202ENST00000626177 IL17REQ8NFR9 667 aa11.71□□□□□ -0.53
CCDC163-202ENST00000626177 ANKRD24Q8TF21 1146 aa11.71□□□□□ -0.53
CCDC163-202ENST00000626177 PCDHB15Q9Y5E8 787 aa11.71□□□□□ -0.53
CCDC163-202ENST00000626177 ATF7IPQ6VMQ6 1270 aa11.71□□□□□ -0.54
CCDC163-202ENST00000626177 ALDH1L2Q3SY69 923 aa11.7□□□□□ -0.54
CCDC163-202ENST00000626177 GAS2L2Q8NHY3 880 aa11.7□□□□□ -0.54
CCDC163-202ENST00000626177 RTF1Q92541 710 aaKnown RBP11.7□□□□□ -0.54
CCDC163-202ENST00000626177 SLAIN2Q9P270 581 aa11.7□□□□□ -0.54
CCDC163-202ENST00000626177 NPHP3Q7Z494 1330 aa11.7□□□□□ -0.54
CCDC163-202ENST00000626177 MVPQ14764 893 aaKnown RBP11.7□□□□□ -0.54
CCDC163-202ENST00000626177 CHRNA2Q15822 529 aa11.7□□□□□ -0.54
CCDC163-202ENST00000626177 TMEM57Q8N5G2 664 aa11.7□□□□□ -0.54
CCDC163-202ENST00000626177 PXDNQ92626 1479 aa11.69□□□□□ -0.54
CCDC163-202ENST00000626177 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
CCDC163-202ENST00000626177 GNAT3A8MTJ3 354 aa11.69□□□□□ -0.54
CCDC163-202ENST00000626177 FTSJ3Q8IY81 847 aaKnown RBP11.69□□□□□ -0.54
CCDC163-202ENST00000626177 SPATA31A3Q5VYP0 1347 aa11.68□□□□□ -0.54
CCDC163-202ENST00000626177 LGR6Q9HBX8 967 aa11.68□□□□□ -0.54
CCDC163-202ENST00000626177 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
CCDC163-202ENST00000626177 CENPQQ7L2Z9 268 aaPredicted RBP11.68□□□□□ -0.54
CCDC163-202ENST00000626177 TSPYL4Q9UJ04 414 aa11.68□□□□□ -0.54
CCDC163-202ENST00000626177 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
CCDC163-202ENST00000626177 ITPRIPQ8IWB1 547 aa11.67□□□□□ -0.54
CCDC163-202ENST00000626177 TNS3Q68CZ2 1445 aa11.67□□□□□ -0.54
CCDC163-202ENST00000626177 MAP3K5Q99683 1374 aa11.66□□□□□ -0.54
CCDC163-202ENST00000626177 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
CCDC163-202ENST00000626177 NBR1Q14596 966 aa11.66□□□□□ -0.54
CCDC163-202ENST00000626177 ERBB3P21860 1342 aa11.65□□□□□ -0.54
CCDC163-202ENST00000626177 KIF16BQ96L93 1317 aa11.65□□□□□ -0.54
CCDC163-202ENST00000626177 IPO8O15397 1037 aaKnown RBP11.65□□□□□ -0.54
CCDC163-202ENST00000626177 HTATSF1O43719 755 aaKnown RBP11.65□□□□□ -0.54
CCDC163-202ENST00000626177 MPRIPQ6WCQ1 1025 aa11.65□□□□□ -0.54
CCDC163-202ENST00000626177 ZNF428Q96B54 188 aa11.65□□□□□ -0.54
CCDC163-202ENST00000626177 KIAA0232Q92628 1395 aa11.64□□□□□ -0.55
CCDC163-202ENST00000626177 ZNF530Q6P9A1 599 aaPredicted RBP11.64□□□□□ -0.55
CCDC163-202ENST00000626177 NECTIN2Q92692 538 aa11.64□□□□□ -0.55
CCDC163-202ENST00000626177 NLRP2Q9NX02 1062 aa11.64□□□□□ -0.55
CCDC163-202ENST00000626177 SOS2Q07890 1332 aaPredicted RBP11.63□□□□□ -0.55
CCDC163-202ENST00000626177 KCNQ3O43525 872 aa11.63□□□□□ -0.55
CCDC163-202ENST00000626177 RGS3P49796 1198 aa11.63□□□□□ -0.55
CCDC163-202ENST00000626177 G2E3Q7L622 706 aa11.63□□□□□ -0.55
CCDC163-202ENST00000626177 COL18A1P39060 1754 aa11.63□□□□□ -0.55
CCDC163-202ENST00000626177 NCAPD2Q15021 1401 aa11.63□□□□□ -0.55
CCDC163-202ENST00000626177 LRRC37A3O60309 1634 aa11.63□□□□□ -0.55
CCDC163-202ENST00000626177 MS4A1P11836 297 aa11.63□□□□□ -0.55
CCDC163-202ENST00000626177 TAF7Q15545 349 aaPredicted RBP11.63□□□□□ -0.55
CCDC163-202ENST00000626177 CRYBG1Q9Y4K1 1723 aa11.62□□□□□ -0.55
CCDC163-202ENST00000626177 PLEKHO1Q53GL0 409 aaPredicted RBP11.62□□□□□ -0.55
CCDC163-202ENST00000626177 ZBTB40Q9NUA8 1239 aa11.62□□□□□ -0.55
CCDC163-202ENST00000626177 DDX19BQ9UMR2 479 aa11.62□□□□□ -0.55
CCDC163-202ENST00000626177 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
CCDC163-202ENST00000626177 ARHGAP45Q92619 1136 aa11.62□□□□□ -0.55
CCDC163-202ENST00000626177 C1orf115Q9H7X2 142 aa11.62□□□□□ -0.55
CCDC163-202ENST00000626177 CEMIPQ8WUJ3 1361 aa11.61□□□□□ -0.55
CCDC163-202ENST00000626177 ZBTB7BO15156 539 aaPredicted RBP11.61□□□□□ -0.55
CCDC163-202ENST00000626177 CSB-PGBD3P0DP91 1061 aa11.61□□□□□ -0.55
CCDC163-202ENST00000626177 PDE4AP27815 886 aa11.6□□□□□ -0.55
CCDC163-202ENST00000626177 AKAP4Q5JQC9 854 aa11.6□□□□□ -0.55
CCDC163-202ENST00000626177 ABCC4O15439 1325 aa11.6□□□□□ -0.55
CCDC163-202ENST00000626177 RNMTO43148 476 aaKnown RBP11.6□□□□□ -0.55
CCDC163-202ENST00000626177 RGS12O14924 1447 aa11.6□□□□□ -0.55
CCDC163-202ENST00000626177 CAMTA1Q9Y6Y1 1673 aa11.59□□□□□ -0.55
CCDC163-202ENST00000626177 LMO7Q8WWI1 1683 aa11.59□□□□□ -0.55
CCDC163-202ENST00000626177 AMOTQ4VCS5 1084 aa11.59□□□□□ -0.55
CCDC163-202ENST00000626177 PDZRN3Q9UPQ7 1066 aa11.59□□□□□ -0.55
CCDC163-202ENST00000626177 MEGF6O75095 1541 aa11.58□□□□□ -0.55
CCDC163-202ENST00000626177 F6X3S4 739 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms