RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 RRS1Q15050 365 aaKnown RBP15.61■□□□□ 0.09
DDX41-218ENST00000625286 SLC27A3Q5K4L6 730 aa15.61■□□□□ 0.09
DDX41-218ENST00000625286 NBPF6Q5VWK0 638 aa15.61■□□□□ 0.09
DDX41-218ENST00000625286 COG3Q96JB2 828 aa15.61■□□□□ 0.09
DDX41-218ENST00000625286 NBPF4Q96M43 638 aa15.61■□□□□ 0.09
DDX41-218ENST00000625286 AMPHP49418 695 aa15.6■□□□□ 0.09
DDX41-218ENST00000625286 ZCRB1Q8TBF4 217 aaKnown RBP15.6■□□□□ 0.09
DDX41-218ENST00000625286 ANKRD36BQ8N2N9 1353 aa15.6■□□□□ 0.09
DDX41-218ENST00000625286 LY75O60449 1722 aa15.6■□□□□ 0.09
DDX41-218ENST00000625286 QSER1Q2KHR3 1735 aa15.6■□□□□ 0.09
DDX41-218ENST00000625286 DOT1LQ8TEK3 1739 aa15.6■□□□□ 0.09
DDX41-218ENST00000625286 USHBP1Q8N6Y0 703 aa15.59■□□□□ 0.09
DDX41-218ENST00000625286 SYTL4Q96C24 671 aaPredicted RBP15.59■□□□□ 0.09
DDX41-218ENST00000625286 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.08
DDX41-218ENST00000625286 SLC16A10Q8TF71 515 aa15.57■□□□□ 0.08
DDX41-218ENST00000625286 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
DDX41-218ENST00000625286 HSP90AB2PQ58FF8 381 aa15.56■□□□□ 0.08
DDX41-218ENST00000625286 NLGN2Q8NFZ4 835 aa15.56■□□□□ 0.08
DDX41-218ENST00000625286 COL23A1Q86Y22 540 aaPredicted RBP15.55■□□□□ 0.08
DDX41-218ENST00000625286 CARD14Q9BXL6 1004 aa15.54■□□□□ 0.08
DDX41-218ENST00000625286 CCNL1Q9UK58 526 aaPredicted RBP15.54■□□□□ 0.08
DDX41-218ENST00000625286 RTL1A6NKG5 1358 aa15.53■□□□□ 0.08
DDX41-218ENST00000625286 GPR162Q16538 588 aa15.53■□□□□ 0.08
DDX41-218ENST00000625286 KLHL34Q8N239 644 aa15.53■□□□□ 0.08
DDX41-218ENST00000625286 CYP27B1O15528 508 aa15.51■□□□□ 0.07
DDX41-218ENST00000625286 POLD1P28340 1107 aa15.51■□□□□ 0.07
DDX41-218ENST00000625286 AMIGO3Q86WK7 504 aa15.51■□□□□ 0.07
DDX41-218ENST00000625286 INSRP06213 1382 aa15.5■□□□□ 0.07
DDX41-218ENST00000625286 USP47Q96K76 1375 aa15.5■□□□□ 0.07
DDX41-218ENST00000625286 YBX3P16989 372 aaKnown RBP eCLIP15.5■□□□□ 0.07
DDX41-218ENST00000625286 TMF1P82094 1093 aa15.5■□□□□ 0.07
DDX41-218ENST00000625286 CGNL1Q0VF96 1302 aa15.49■□□□□ 0.07
DDX41-218ENST00000625286 SLC24A1O60721 1099 aa15.49■□□□□ 0.07
DDX41-218ENST00000625286 C1QTNF8P60827 252 aa15.49■□□□□ 0.07
DDX41-218ENST00000625286 MSL1Q68DK7 614 aa15.49■□□□□ 0.07
DDX41-218ENST00000625286 SMIM5Q71RC9 77 aa15.49■□□□□ 0.07
DDX41-218ENST00000625286 RAPGEF4Q8WZA2 1011 aa15.49■□□□□ 0.07
DDX41-218ENST00000625286 EMILIN1Q9Y6C2 1016 aa15.49■□□□□ 0.07
DDX41-218ENST00000625286 TAF1LQ8IZX4 1826 aa15.48■□□□□ 0.07
DDX41-218ENST00000625286 TATP17735 454 aaPredicted RBP15.48■□□□□ 0.07
DDX41-218ENST00000625286 PELP1Q8IZL8 1130 aaKnown RBP15.48■□□□□ 0.07
DDX41-218ENST00000625286 TOGARAM1Q9Y4F4 1720 aa15.48■□□□□ 0.07
DDX41-218ENST00000625286 ITGB4P16144 1822 aa15.47■□□□□ 0.07
DDX41-218ENST00000625286 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
DDX41-218ENST00000625286 MSH5O43196 834 aa15.47■□□□□ 0.07
DDX41-218ENST00000625286 MPRIPQ6WCQ1 1025 aa15.47■□□□□ 0.07
DDX41-218ENST00000625286 C5P01031 1676 aa15.47■□□□□ 0.07
DDX41-218ENST00000625286 CEP350Q5VT06 3117 aa15.46■□□□□ 0.07
DDX41-218ENST00000625286 FLT4P35916 1363 aa15.46■□□□□ 0.07
DDX41-218ENST00000625286 PCDH11XQ9BZA7 1347 aa15.45■□□□□ 0.06
DDX41-218ENST00000625286 PCDH11YQ9BZA8 1340 aa15.45■□□□□ 0.06
DDX41-218ENST00000625286 PIGBQ92521 554 aa15.45■□□□□ 0.06
DDX41-218ENST00000625286 PALLDQ8WX93 1383 aa15.45■□□□□ 0.06
DDX41-218ENST00000625286 NCAPD2Q15021 1401 aa15.44■□□□□ 0.06
DDX41-218ENST00000625286 SMG6Q86US8 1419 aaKnown RBP15.43■□□□□ 0.06
DDX41-218ENST00000625286 PKD1L3Q7Z443 1732 aa15.43■□□□□ 0.06
DDX41-218ENST00000625286 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
DDX41-218ENST00000625286 NKX1-1Q15270 411 aaPredicted RBP15.43■□□□□ 0.06
DDX41-218ENST00000625286 KIF24Q5T7B8 1368 aa15.43■□□□□ 0.06
DDX41-218ENST00000625286 MAP2P11137 1827 aaKnown RBP15.43■□□□□ 0.06
DDX41-218ENST00000625286 NSD3Q9BZ95 1437 aa15.43■□□□□ 0.06
DDX41-218ENST00000625286 EYA1Q99502 592 aa15.42■□□□□ 0.06
DDX41-218ENST00000625286 C4BP0C0L5 1744 aa15.42■□□□□ 0.06
DDX41-218ENST00000625286 UBR3Q6ZT12 1888 aa15.41■□□□□ 0.06
DDX41-218ENST00000625286 WASHC2AQ641Q2 1341 aa15.41■□□□□ 0.06
DDX41-218ENST00000625286 PPM1GO15355 546 aaPredicted RBP15.4■□□□□ 0.06
DDX41-218ENST00000625286 LINC00116Q8NCU8 138 aa15.4■□□□□ 0.06
DDX41-218ENST00000625286 POLKQ9UBT6 870 aa15.4■□□□□ 0.06
DDX41-218ENST00000625286 CD2APQ9Y5K6 639 aa15.4■□□□□ 0.06
DDX41-218ENST00000625286 ANKRD26Q9UPS8 1709 aa15.4■□□□□ 0.06
DDX41-218ENST00000625286 GRIN3BO60391 1043 aa15.39■□□□□ 0.05
DDX41-218ENST00000625286 CDCA8Q53HL2 280 aa15.39■□□□□ 0.05
DDX41-218ENST00000625286 ASAP1Q9ULH1 1129 aa15.39■□□□□ 0.05
DDX41-218ENST00000625286 GIGYF1O75420 1035 aaPredicted RBP15.38■□□□□ 0.05
DDX41-218ENST00000625286 ITPK1Q13572 414 aa15.38■□□□□ 0.05
DDX41-218ENST00000625286 FLAD1Q8NFF5 587 aa15.38■□□□□ 0.05
DDX41-218ENST00000625286 SMARCC1Q92922 1105 aaPredicted RBP15.38■□□□□ 0.05
DDX41-218ENST00000625286 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.37■□□□□ 0.05
DDX41-218ENST00000625286 LOC102724428A0A0B4J2F2 783 aa15.37■□□□□ 0.05
DDX41-218ENST00000625286 PHF14O94880 888 aa15.37■□□□□ 0.05
DDX41-218ENST00000625286 SIK1P57059 783 aa15.37■□□□□ 0.05
DDX41-218ENST00000625286 PHKG2P15735 406 aa15.36■□□□□ 0.05
DDX41-218ENST00000625286 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
DDX41-218ENST00000625286 AK7Q96M32 723 aa15.36■□□□□ 0.05
DDX41-218ENST00000625286 WWC3Q9ULE0 1092 aa15.36■□□□□ 0.05
DDX41-218ENST00000625286 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
DDX41-218ENST00000625286 EIF4A2Q14240 407 aaKnown RBP15.35■□□□□ 0.05
DDX41-218ENST00000625286 SLC4A9Q96Q91 983 aa15.35■□□□□ 0.05
DDX41-218ENST00000625286 ATG3Q9NT62 314 aa15.35■□□□□ 0.05
DDX41-218ENST00000625286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.35■□□□□ 0.05
DDX41-218ENST00000625286 ATP10DQ9P241 1426 aa15.34■□□□□ 0.05
DDX41-218ENST00000625286 TNNT2P45379 298 aaPredicted RBP15.33■□□□□ 0.04
DDX41-218ENST00000625286 TMOD3Q9NYL9 352 aa15.33■□□□□ 0.04
DDX41-218ENST00000625286 ADCY9O60503 1353 aa15.33■□□□□ 0.04
DDX41-218ENST00000625286 SSFA2P28290 1259 aa15.32■□□□□ 0.04
DDX41-218ENST00000625286 ATP6V1AP38606 617 aa15.32■□□□□ 0.04
DDX41-218ENST00000625286 IFNL2Q8IZJ0 200 aa15.32■□□□□ 0.04
DDX41-218ENST00000625286 IGSF1Q8N6C5 1336 aa15.32■□□□□ 0.04
DDX41-218ENST00000625286 GNPATO15228 680 aa15.3■□□□□ 0.04
DDX41-218ENST00000625286 KDRP35968 1356 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms