RNA–Protein interactions for RNA: ENST00000625133.1

PCDHB19P-202, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,914 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-202ENST00000625133 CHRNA2Q15822 529 aa17.47■□□□□ 0.39
PCDHB19P-202ENST00000625133 SMC4Q9NTJ3 1288 aa17.47■□□□□ 0.39
PCDHB19P-202ENST00000625133 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
PCDHB19P-202ENST00000625133 DCCP43146 1447 aa17.46■□□□□ 0.39
PCDHB19P-202ENST00000625133 IGSF1Q8N6C5 1336 aa17.46■□□□□ 0.39
PCDHB19P-202ENST00000625133 KCNH5Q8NCM2 988 aa17.46■□□□□ 0.39
PCDHB19P-202ENST00000625133 TRPM3Q9HCF6 1732 aaPredicted RBP17.46■□□□□ 0.38
PCDHB19P-202ENST00000625133 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
PCDHB19P-202ENST00000625133 TSPYL6Q8N831 410 aa17.44■□□□□ 0.38
PCDHB19P-202ENST00000625133 SSH1Q8WYL5 1049 aa17.44■□□□□ 0.38
PCDHB19P-202ENST00000625133 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
PCDHB19P-202ENST00000625133 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
PCDHB19P-202ENST00000625133 MED1Q15648 1581 aaPredicted RBP17.43■□□□□ 0.38
PCDHB19P-202ENST00000625133 FRAT2O75474 233 aaPredicted RBP17.43■□□□□ 0.38
PCDHB19P-202ENST00000625133 KRT24Q2M2I5 525 aa17.43■□□□□ 0.38
PCDHB19P-202ENST00000625133 RGPD1P0DJD0 1748 aa17.42■□□□□ 0.38
PCDHB19P-202ENST00000625133 PXDNQ92626 1479 aa17.42■□□□□ 0.38
PCDHB19P-202ENST00000625133 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
PCDHB19P-202ENST00000625133 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
PCDHB19P-202ENST00000625133 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
PCDHB19P-202ENST00000625133 LTN1O94822 1766 aa17.41■□□□□ 0.38
PCDHB19P-202ENST00000625133 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
PCDHB19P-202ENST00000625133 GSE1Q14687 1217 aa17.41■□□□□ 0.38
PCDHB19P-202ENST00000625133 KDRP35968 1356 aa17.4■□□□□ 0.38
PCDHB19P-202ENST00000625133 MVPQ14764 893 aaKnown RBP17.4■□□□□ 0.38
PCDHB19P-202ENST00000625133 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
PCDHB19P-202ENST00000625133 FTSJ3Q8IY81 847 aaKnown RBP17.4■□□□□ 0.38
PCDHB19P-202ENST00000625133 NOB1Q9ULX3 412 aaKnown RBP17.39■□□□□ 0.37
PCDHB19P-202ENST00000625133 USP54Q70EL1 1684 aa17.39■□□□□ 0.37
PCDHB19P-202ENST00000625133 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
PCDHB19P-202ENST00000625133 KIF1AQ12756 1690 aa17.39■□□□□ 0.37
PCDHB19P-202ENST00000625133 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
PCDHB19P-202ENST00000625133 DZIP1LQ8IYY4 767 aaKnown RBP17.38■□□□□ 0.37
PCDHB19P-202ENST00000625133 C8orf58Q8NAV2 365 aa17.38■□□□□ 0.37
PCDHB19P-202ENST00000625133 RWDD1Q9H446 243 aaPredicted RBP17.38■□□□□ 0.37
PCDHB19P-202ENST00000625133 SLIT3O75094 1523 aa17.38■□□□□ 0.37
PCDHB19P-202ENST00000625133 ALS2Q96Q42 1657 aa17.38■□□□□ 0.37
PCDHB19P-202ENST00000625133 SOS2Q07890 1332 aaPredicted RBP17.38■□□□□ 0.37
PCDHB19P-202ENST00000625133 TNS3Q68CZ2 1445 aa17.37■□□□□ 0.37
PCDHB19P-202ENST00000625133 IL16Q14005 1332 aa17.37■□□□□ 0.37
PCDHB19P-202ENST00000625133 RGPD2P0DJD1 1756 aa17.37■□□□□ 0.37
PCDHB19P-202ENST00000625133 GNAI1P63096 354 aa17.36■□□□□ 0.37
PCDHB19P-202ENST00000625133 RTF1Q92541 710 aaKnown RBP17.36■□□□□ 0.37
PCDHB19P-202ENST00000625133 KIF24Q5T7B8 1368 aa17.36■□□□□ 0.37
PCDHB19P-202ENST00000625133 KIAA0232Q92628 1395 aa17.36■□□□□ 0.37
PCDHB19P-202ENST00000625133 TRIM27P14373 513 aa17.36■□□□□ 0.37
PCDHB19P-202ENST00000625133 IL17REQ8NFR9 667 aa17.36■□□□□ 0.37
PCDHB19P-202ENST00000625133 SLKQ9H2G2 1235 aaPredicted RBP17.36■□□□□ 0.37
PCDHB19P-202ENST00000625133 CFAP44Q96MT7 982 aa17.35■□□□□ 0.37
PCDHB19P-202ENST00000625133 AAMPQ13685 434 aa17.35■□□□□ 0.37
PCDHB19P-202ENST00000625133 RTL1A6NKG5 1358 aa17.35■□□□□ 0.37
PCDHB19P-202ENST00000625133 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
PCDHB19P-202ENST00000625133 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
PCDHB19P-202ENST00000625133 LGR6Q9HBX8 967 aa17.34■□□□□ 0.37
PCDHB19P-202ENST00000625133 IFT57Q9NWB7 429 aa17.34■□□□□ 0.37
PCDHB19P-202ENST00000625133 VAMP4O75379 141 aa17.34■□□□□ 0.37
PCDHB19P-202ENST00000625133 TWISTNBQ3B726 338 aaPredicted RBP17.34■□□□□ 0.37
PCDHB19P-202ENST00000625133 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
PCDHB19P-202ENST00000625133 RGPD5Q99666 1765 aa17.33■□□□□ 0.37
PCDHB19P-202ENST00000625133 NLRP2Q9NX02 1062 aa17.33■□□□□ 0.37
PCDHB19P-202ENST00000625133 BRPF3Q9ULD4 1205 aa17.33■□□□□ 0.37
PCDHB19P-202ENST00000625133 ERBB3P21860 1342 aa17.33■□□□□ 0.36
PCDHB19P-202ENST00000625133 VIRMAQ69YN4 1812 aaKnown RBP17.32■□□□□ 0.36
PCDHB19P-202ENST00000625133 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
PCDHB19P-202ENST00000625133 CHL1O00533 1208 aa17.31■□□□□ 0.36
PCDHB19P-202ENST00000625133 CRB1P82279 1406 aa17.31■□□□□ 0.36
PCDHB19P-202ENST00000625133 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
PCDHB19P-202ENST00000625133 BECN1Q14457 450 aa17.31■□□□□ 0.36
PCDHB19P-202ENST00000625133 PIP4K2BP78356 416 aa17.3■□□□□ 0.36
PCDHB19P-202ENST00000625133 ATF7IPQ6VMQ6 1270 aa17.3■□□□□ 0.36
PCDHB19P-202ENST00000625133 TMEM57Q8N5G2 664 aa17.3■□□□□ 0.36
PCDHB19P-202ENST00000625133 GAS2L2Q8NHY3 880 aa17.3■□□□□ 0.36
PCDHB19P-202ENST00000625133 TBC1D32Q96NH3 1257 aa17.3■□□□□ 0.36
PCDHB19P-202ENST00000625133 UPF2Q9HAU5 1272 aaKnown RBP17.3■□□□□ 0.36
PCDHB19P-202ENST00000625133 CSB-PGBD3P0DP91 1061 aa17.3■□□□□ 0.36
PCDHB19P-202ENST00000625133 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
PCDHB19P-202ENST00000625133 LTBP4Q8N2S1 1624 aa17.29■□□□□ 0.36
PCDHB19P-202ENST00000625133 CT47B1P0C2W7 299 aaPredicted RBP17.29■□□□□ 0.36
PCDHB19P-202ENST00000625133 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
PCDHB19P-202ENST00000625133 TSPYL4Q9UJ04 414 aa17.29■□□□□ 0.36
PCDHB19P-202ENST00000625133 SPRYD3Q8NCJ5 442 aa17.29■□□□□ 0.36
PCDHB19P-202ENST00000625133 PRDM11Q9NQV5 511 aa17.29■□□□□ 0.36
PCDHB19P-202ENST00000625133 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.36
PCDHB19P-202ENST00000625133 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
PCDHB19P-202ENST00000625133 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.35
PCDHB19P-202ENST00000625133 KCNQ3O43525 872 aa17.26■□□□□ 0.35
PCDHB19P-202ENST00000625133 MFAP1P55081 439 aaKnown RBP17.26■□□□□ 0.35
PCDHB19P-202ENST00000625133 C1orf115Q9H7X2 142 aa17.26■□□□□ 0.35
PCDHB19P-202ENST00000625133 STRN4Q9NRL3 753 aa17.25■□□□□ 0.35
PCDHB19P-202ENST00000625133 PHRF1Q9P1Y6 1649 aaKnown RBP17.25■□□□□ 0.35
PCDHB19P-202ENST00000625133 MRPL50Q8N5N7 158 aaKnown RBP17.25■□□□□ 0.35
PCDHB19P-202ENST00000625133 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
PCDHB19P-202ENST00000625133 MAP3K5Q99683 1374 aa17.24■□□□□ 0.35
PCDHB19P-202ENST00000625133 COL18A1P39060 1754 aa17.24■□□□□ 0.35
PCDHB19P-202ENST00000625133 IPO8O15397 1037 aaKnown RBP17.23■□□□□ 0.35
PCDHB19P-202ENST00000625133 PKNOX2Q96KN3 472 aa17.23■□□□□ 0.35
PCDHB19P-202ENST00000625133 ANTXR1Q9H6X2 564 aa17.23■□□□□ 0.35
PCDHB19P-202ENST00000625133 ZBTB40Q9NUA8 1239 aa17.23■□□□□ 0.35
PCDHB19P-202ENST00000625133 CAMTA1Q9Y6Y1 1673 aa17.23■□□□□ 0.35
PCDHB19P-202ENST00000625133 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms