RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 TWISTNBQ3B726 338 aaPredicted RBP16.96■□□□□ 0.3
C3orf56-201ENST00000624688 CADPS2Q86UW7 1296 aa16.96■□□□□ 0.3
C3orf56-201ENST00000624688 MRPL50Q8N5N7 158 aaKnown RBP16.96■□□□□ 0.3
C3orf56-201ENST00000624688 MSH6P52701 1360 aa16.94■□□□□ 0.3
C3orf56-201ENST00000624688 ELL2O00472 640 aaPredicted RBP16.94■□□□□ 0.3
C3orf56-201ENST00000624688 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
C3orf56-201ENST00000624688 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
C3orf56-201ENST00000624688 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
C3orf56-201ENST00000624688 USHBP1Q8N6Y0 703 aa16.94■□□□□ 0.3
C3orf56-201ENST00000624688 DDX17Q92841 729 aaKnown RBP16.94■□□□□ 0.3
C3orf56-201ENST00000624688 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
C3orf56-201ENST00000624688 PCDHB15Q9Y5E8 787 aa16.93■□□□□ 0.3
C3orf56-201ENST00000624688 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
C3orf56-201ENST00000624688 IPO8O15397 1037 aaKnown RBP16.93■□□□□ 0.3
C3orf56-201ENST00000624688 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
C3orf56-201ENST00000624688 KIAA0232Q92628 1395 aa16.92■□□□□ 0.3
C3orf56-201ENST00000624688 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
C3orf56-201ENST00000624688 RTF1Q92541 710 aaKnown RBP16.92■□□□□ 0.3
C3orf56-201ENST00000624688 NCAPD2Q15021 1401 aa16.92■□□□□ 0.3
C3orf56-201ENST00000624688 CAMTA1Q9Y6Y1 1673 aa16.91■□□□□ 0.3
C3orf56-201ENST00000624688 PXDNQ92626 1479 aa16.91■□□□□ 0.3
C3orf56-201ENST00000624688 KRT24Q2M2I5 525 aa16.91■□□□□ 0.3
C3orf56-201ENST00000624688 TMEM57Q8N5G2 664 aa16.91■□□□□ 0.3
C3orf56-201ENST00000624688 GNAT3A8MTJ3 354 aa16.9■□□□□ 0.3
C3orf56-201ENST00000624688 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
C3orf56-201ENST00000624688 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
C3orf56-201ENST00000624688 ZNF335Q9H4Z2 1342 aaPredicted RBP16.9■□□□□ 0.3
C3orf56-201ENST00000624688 ARHGAP45Q92619 1136 aa16.9■□□□□ 0.3
C3orf56-201ENST00000624688 LRRC59Q96AG4 307 aaKnown RBP16.9■□□□□ 0.3
C3orf56-201ENST00000624688 RGPD5Q99666 1765 aa16.89■□□□□ 0.3
C3orf56-201ENST00000624688 ITPRIPQ8IWB1 547 aa16.89■□□□□ 0.29
C3orf56-201ENST00000624688 MIS18AQ9NYP9 233 aa16.89■□□□□ 0.29
C3orf56-201ENST00000624688 DDX19BQ9UMR2 479 aa16.89■□□□□ 0.29
C3orf56-201ENST00000624688 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
C3orf56-201ENST00000624688 CRYBG1Q9Y4K1 1723 aa16.89■□□□□ 0.29
C3orf56-201ENST00000624688 TNS3Q68CZ2 1445 aa16.88■□□□□ 0.29
C3orf56-201ENST00000624688 IL17REQ8NFR9 667 aa16.87■□□□□ 0.29
C3orf56-201ENST00000624688 ANKRD24Q8TF21 1146 aa16.87■□□□□ 0.29
C3orf56-201ENST00000624688 COL18A1P39060 1754 aa16.86■□□□□ 0.29
C3orf56-201ENST00000624688 LMO7Q8WWI1 1683 aa16.86■□□□□ 0.29
C3orf56-201ENST00000624688 BRINP3Q76B58 766 aa16.86■□□□□ 0.29
C3orf56-201ENST00000624688 TSPYL4Q9UJ04 414 aa16.86■□□□□ 0.29
C3orf56-201ENST00000624688 ABCC4O15439 1325 aa16.86■□□□□ 0.29
C3orf56-201ENST00000624688 SPATA31A3Q5VYP0 1347 aa16.86■□□□□ 0.29
C3orf56-201ENST00000624688 ZBTB40Q9NUA8 1239 aa16.85■□□□□ 0.29
C3orf56-201ENST00000624688 PDE4AP27815 886 aa16.84■□□□□ 0.29
C3orf56-201ENST00000624688 ZC3H6P61129 1189 aaKnown RBP16.84■□□□□ 0.29
C3orf56-201ENST00000624688 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
C3orf56-201ENST00000624688 HAP1P54257 671 aaPredicted RBP16.84■□□□□ 0.29
C3orf56-201ENST00000624688 BACH2Q9BYV9 841 aa16.84■□□□□ 0.29
C3orf56-201ENST00000624688 RWDD1Q9H446 243 aaPredicted RBP16.83■□□□□ 0.28
C3orf56-201ENST00000624688 ERBB3P21860 1342 aa16.83■□□□□ 0.28
C3orf56-201ENST00000624688 CABLES1Q8TDN4 633 aa16.82■□□□□ 0.28
C3orf56-201ENST00000624688 RGS12O14924 1447 aa16.82■□□□□ 0.28
C3orf56-201ENST00000624688 API5Q9BZZ5 524 aaKnown RBP16.82■□□□□ 0.28
C3orf56-201ENST00000624688 BABAM1Q9NWV8 329 aa16.82■□□□□ 0.28
C3orf56-201ENST00000624688 SLAIN2Q9P270 581 aa16.82■□□□□ 0.28
C3orf56-201ENST00000624688 ZBTB7BO15156 539 aaPredicted RBP16.81■□□□□ 0.28
C3orf56-201ENST00000624688 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
C3orf56-201ENST00000624688 FAM208AQ9UK61 1670 aaKnown RBP16.81■□□□□ 0.28
C3orf56-201ENST00000624688 ABCC6O95255 1503 aa16.8■□□□□ 0.28
C3orf56-201ENST00000624688 RGS3P49796 1198 aa16.8■□□□□ 0.28
C3orf56-201ENST00000624688 HDAC1Q13547 482 aaPredicted RBP16.8■□□□□ 0.28
C3orf56-201ENST00000624688 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
C3orf56-201ENST00000624688 AMOTQ4VCS5 1084 aa16.79■□□□□ 0.28
C3orf56-201ENST00000624688 LGR6Q9HBX8 967 aa16.79■□□□□ 0.28
C3orf56-201ENST00000624688 SOS2Q07890 1332 aaPredicted RBP16.79■□□□□ 0.28
C3orf56-201ENST00000624688 AKAP4Q5JQC9 854 aa16.79■□□□□ 0.28
C3orf56-201ENST00000624688 ZNF530Q6P9A1 599 aaPredicted RBP16.79■□□□□ 0.28
C3orf56-201ENST00000624688 VIRMAQ69YN4 1812 aaKnown RBP16.78■□□□□ 0.28
C3orf56-201ENST00000624688 CPDO75976 1380 aa16.78■□□□□ 0.28
C3orf56-201ENST00000624688 KDM3BQ7LBC6 1761 aa16.78■□□□□ 0.28
C3orf56-201ENST00000624688 PTPRCP08575 1304 aa16.77■□□□□ 0.28
C3orf56-201ENST00000624688 PDZRN3Q9UPQ7 1066 aa16.77■□□□□ 0.28
C3orf56-201ENST00000624688 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
C3orf56-201ENST00000624688 INTS3Q68E01 1043 aaKnown RBP16.76■□□□□ 0.27
C3orf56-201ENST00000624688 SOS1Q07889 1333 aaPredicted RBP16.76■□□□□ 0.27
C3orf56-201ENST00000624688 ADAMTS7Q9UKP4 1686 aa16.75■□□□□ 0.27
C3orf56-201ENST00000624688 OVOS2A0A0G2JMS6 1433 aa16.75■□□□□ 0.27
C3orf56-201ENST00000624688 CHRNA2Q15822 529 aa16.75■□□□□ 0.27
C3orf56-201ENST00000624688 C8orf34Q49A92 452 aa16.75■□□□□ 0.27
C3orf56-201ENST00000624688 CHMP4BQ9H444 224 aaKnown RBP16.75■□□□□ 0.27
C3orf56-201ENST00000624688 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
C3orf56-201ENST00000624688 RNMTO43148 476 aaKnown RBP16.74■□□□□ 0.27
C3orf56-201ENST00000624688 MSH5O43196 834 aa16.74■□□□□ 0.27
C3orf56-201ENST00000624688 MPRIPQ6WCQ1 1025 aa16.74■□□□□ 0.27
C3orf56-201ENST00000624688 G2E3Q7L622 706 aa16.74■□□□□ 0.27
C3orf56-201ENST00000624688 ABCA3Q99758 1704 aa16.74■□□□□ 0.27
C3orf56-201ENST00000624688 FAM161AQ3B820 660 aa16.73■□□□□ 0.27
C3orf56-201ENST00000624688 SMC5Q8IY18 1101 aa16.73■□□□□ 0.27
C3orf56-201ENST00000624688 NLRP2Q9NX02 1062 aa16.73■□□□□ 0.27
C3orf56-201ENST00000624688 SIPA1L3O60292 1781 aaPredicted RBP16.73■□□□□ 0.27
C3orf56-201ENST00000624688 C1orf141Q5JVX7 400 aa16.73■□□□□ 0.27
C3orf56-201ENST00000624688 MEGF6O75095 1541 aa16.72■□□□□ 0.27
C3orf56-201ENST00000624688 EIF4A1P60842 406 aaKnown RBP16.72■□□□□ 0.27
C3orf56-201ENST00000624688 CCDC30Q5VVM6 783 aa16.72■□□□□ 0.27
C3orf56-201ENST00000624688 C1orf115Q9H7X2 142 aa16.72■□□□□ 0.27
C3orf56-201ENST00000624688 KCNQ3O43525 872 aa16.71■□□□□ 0.27
C3orf56-201ENST00000624688 TEFQ10587 303 aa16.7■□□□□ 0.26
C3orf56-201ENST00000624688 SIRT2Q8IXJ6 389 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms