RNA–Protein interactions for RNA: ENST00000624644.1

LINC00424-202, long intergenic non-protein coding RNA 424, humanhuman

TSL 3

Gene LINC00424, Length 453 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00424-202ENST00000624644 NSD2O96028 1365 aa16.51■□□□□ 0.23
LINC00424-202ENST00000624644 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
LINC00424-202ENST00000624644 TERF2IPQ9NYB0 399 aa16.5■□□□□ 0.23
LINC00424-202ENST00000624644 EDC4Q6P2E9 1401 aaKnown RBP16.5■□□□□ 0.23
LINC00424-202ENST00000624644 SHANK3Q9BYB0 1731 aa16.48■□□□□ 0.23
LINC00424-202ENST00000624644 CD2APQ9Y5K6 639 aa16.48■□□□□ 0.23
LINC00424-202ENST00000624644 ATP10DQ9P241 1426 aa16.47■□□□□ 0.23
LINC00424-202ENST00000624644 NEUROD1Q13562 356 aa16.47■□□□□ 0.23
LINC00424-202ENST00000624644 GPBP1L1Q9HC44 474 aaPredicted RBP16.47■□□□□ 0.23
LINC00424-202ENST00000624644 COL24A1Q17RW2 1714 aa16.47■□□□□ 0.23
LINC00424-202ENST00000624644 KAT6BQ8WYB5 2073 aa16.46■□□□□ 0.23
LINC00424-202ENST00000624644 MSL1Q68DK7 614 aa16.46■□□□□ 0.23
LINC00424-202ENST00000624644 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
LINC00424-202ENST00000624644 A0A1W2PP64 1363 aa16.46■□□□□ 0.23
LINC00424-202ENST00000624644 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
LINC00424-202ENST00000624644 MAP3K19Q56UN5 1328 aa16.45■□□□□ 0.22
LINC00424-202ENST00000624644 MON2Q7Z3U7 1717 aa16.45■□□□□ 0.22
LINC00424-202ENST00000624644 HMGB2P26583 209 aaKnown RBP16.45■□□□□ 0.22
LINC00424-202ENST00000624644 HOXC9P31274 260 aa16.45■□□□□ 0.22
LINC00424-202ENST00000624644 USP47Q96K76 1375 aa16.45■□□□□ 0.22
LINC00424-202ENST00000624644 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
LINC00424-202ENST00000624644 HSPA6P17066 643 aa16.44■□□□□ 0.22
LINC00424-202ENST00000624644 AMPHP49418 695 aa16.44■□□□□ 0.22
LINC00424-202ENST00000624644 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
LINC00424-202ENST00000624644 COG3Q96JB2 828 aa16.44■□□□□ 0.22
LINC00424-202ENST00000624644 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
LINC00424-202ENST00000624644 FBLN1P23142 703 aa16.43■□□□□ 0.22
LINC00424-202ENST00000624644 CGNL1Q0VF96 1302 aa16.43■□□□□ 0.22
LINC00424-202ENST00000624644 ADCY9O60503 1353 aa16.41■□□□□ 0.22
LINC00424-202ENST00000624644 MEGF6O75095 1541 aa16.41■□□□□ 0.22
LINC00424-202ENST00000624644 NBPF6Q5VWK0 638 aa16.41■□□□□ 0.22
LINC00424-202ENST00000624644 NBPF4Q96M43 638 aa16.41■□□□□ 0.22
LINC00424-202ENST00000624644 LTN1O94822 1766 aa16.41■□□□□ 0.22
LINC00424-202ENST00000624644 ZNF526Q8TF50 670 aaPredicted RBP16.4■□□□□ 0.22
LINC00424-202ENST00000624644 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
LINC00424-202ENST00000624644 LY75O60449 1722 aa16.37■□□□□ 0.21
LINC00424-202ENST00000624644 USHBP1Q8N6Y0 703 aa16.37■□□□□ 0.21
LINC00424-202ENST00000624644 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
LINC00424-202ENST00000624644 TUBGCP6Q96RT7 1819 aa16.36■□□□□ 0.21
LINC00424-202ENST00000624644 TATP17735 454 aaPredicted RBP16.36■□□□□ 0.21
LINC00424-202ENST00000624644 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
LINC00424-202ENST00000624644 MPRIPQ6WCQ1 1025 aa16.36■□□□□ 0.21
LINC00424-202ENST00000624644 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
LINC00424-202ENST00000624644 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
LINC00424-202ENST00000624644 AK7Q96M32 723 aa16.35■□□□□ 0.21
LINC00424-202ENST00000624644 IGSF1Q8N6C5 1336 aa16.35■□□□□ 0.21
LINC00424-202ENST00000624644 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
LINC00424-202ENST00000624644 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
LINC00424-202ENST00000624644 FAM208AQ9UK61 1670 aaKnown RBP16.34■□□□□ 0.21
LINC00424-202ENST00000624644 KIF3CO14782 793 aa16.34■□□□□ 0.21
LINC00424-202ENST00000624644 SMARCC1Q92922 1105 aaPredicted RBP16.34■□□□□ 0.21
LINC00424-202ENST00000624644 TESK2Q96S53 571 aa16.34■□□□□ 0.21
LINC00424-202ENST00000624644 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.21
LINC00424-202ENST00000624644 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.33■□□□□ 0.2
LINC00424-202ENST00000624644 FYB1O15117 783 aa16.32■□□□□ 0.2
LINC00424-202ENST00000624644 CYP27B1O15528 508 aa16.32■□□□□ 0.2
LINC00424-202ENST00000624644 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
LINC00424-202ENST00000624644 SMIM5Q71RC9 77 aa16.32■□□□□ 0.2
LINC00424-202ENST00000624644 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
LINC00424-202ENST00000624644 SMG6Q86US8 1419 aaKnown RBP16.31■□□□□ 0.2
LINC00424-202ENST00000624644 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
LINC00424-202ENST00000624644 PHF14O94880 888 aa16.31■□□□□ 0.2
LINC00424-202ENST00000624644 ST20-MTHFSA0A0A6YYL1 179 aa16.3■□□□□ 0.2
LINC00424-202ENST00000624644 SSFA2P28290 1259 aa16.3■□□□□ 0.2
LINC00424-202ENST00000624644 PIGBQ92521 554 aa16.3■□□□□ 0.2
LINC00424-202ENST00000624644 GGNBP2Q9H3C7 697 aa16.3■□□□□ 0.2
LINC00424-202ENST00000624644 NSD3Q9BZ95 1437 aa16.29■□□□□ 0.2
LINC00424-202ENST00000624644 INSRP06213 1382 aa16.29■□□□□ 0.2
LINC00424-202ENST00000624644 APLP1P51693 650 aa16.29■□□□□ 0.2
LINC00424-202ENST00000624644 LOC102724428A0A0B4J2F2 783 aa16.28■□□□□ 0.2
LINC00424-202ENST00000624644 SIK1P57059 783 aa16.28■□□□□ 0.2
LINC00424-202ENST00000624644 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
LINC00424-202ENST00000624644 DNAJC5GQ8N7S2 189 aa16.28■□□□□ 0.2
LINC00424-202ENST00000624644 LINC00116Q8NCU8 138 aa16.27■□□□□ 0.2
LINC00424-202ENST00000624644 TOMM70O94826 608 aa16.26■□□□□ 0.19
LINC00424-202ENST00000624644 FLT4P35916 1363 aa16.26■□□□□ 0.19
LINC00424-202ENST00000624644 KIF24Q5T7B8 1368 aa16.26■□□□□ 0.19
LINC00424-202ENST00000624644 C5P01031 1676 aa16.25■□□□□ 0.19
LINC00424-202ENST00000624644 GNPATO15228 680 aa16.24■□□□□ 0.19
LINC00424-202ENST00000624644 MMP10P09238 476 aa16.24■□□□□ 0.19
LINC00424-202ENST00000624644 ITPK1Q13572 414 aa16.24■□□□□ 0.19
LINC00424-202ENST00000624644 SPG7Q9UQ90 795 aa16.24■□□□□ 0.19
LINC00424-202ENST00000624644 C4BP0C0L5 1744 aa16.24■□□□□ 0.19
LINC00424-202ENST00000624644 TGFB2P61812 414 aa16.23■□□□□ 0.19
LINC00424-202ENST00000624644 ASAP1Q9ULH1 1129 aa16.23■□□□□ 0.19
LINC00424-202ENST00000624644 RGPD2P0DJD1 1756 aa16.23■□□□□ 0.19
LINC00424-202ENST00000624644 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
LINC00424-202ENST00000624644 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
LINC00424-202ENST00000624644 BCS1LQ9Y276 419 aa16.22■□□□□ 0.19
LINC00424-202ENST00000624644 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
LINC00424-202ENST00000624644 A0A0G2JLW4 131 aa16.21■□□□□ 0.19
LINC00424-202ENST00000624644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.21■□□□□ 0.19
LINC00424-202ENST00000624644 TMF1P82094 1093 aa16.2■□□□□ 0.18
LINC00424-202ENST00000624644 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
LINC00424-202ENST00000624644 ARHGAP27Q6ZUM4 889 aa16.2■□□□□ 0.18
LINC00424-202ENST00000624644 NLGN1Q8N2Q7 840 aa16.2■□□□□ 0.18
LINC00424-202ENST00000624644 EMILIN1Q9Y6C2 1016 aa16.2■□□□□ 0.18
LINC00424-202ENST00000624644 PXDNLA1KZ92 1463 aa16.2■□□□□ 0.18
LINC00424-202ENST00000624644 TRAPPC3LQ5T215 181 aa16.19■□□□□ 0.18
LINC00424-202ENST00000624644 NMRK2Q9NPI5 230 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms