RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 USP17L20D6RJB6 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 DGAT1O75907 488 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 DKK1O94907 266 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L24Q0WX57 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 STK32AQ8WU08 396 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 NOD1Q9Y239 953 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 PCDHGA11Q9Y5H2 935 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 ATP5J2-PTCD1G3V325 749 aa7.12□□□□□ -1.27
ATRX-209ENST00000623242 RASA1P20936 1047 aa7.12□□□□□ -1.27
ATRX-209ENST00000623242 ELOAQ14241 798 aaKnown RBP7.12□□□□□ -1.27
ATRX-209ENST00000623242 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
ATRX-209ENST00000623242 TRAIPQ9BWF2 469 aa7.12□□□□□ -1.27
ATRX-209ENST00000623242 LILRA1O75019 489 aa7.11□□□□□ -1.27
ATRX-209ENST00000623242 ALDH1A1P00352 501 aa7.11□□□□□ -1.27
ATRX-209ENST00000623242 ERVK-9P63128 1117 aa7.11□□□□□ -1.27
ATRX-209ENST00000623242 GTF2IP78347 998 aa7.11□□□□□ -1.27
ATRX-209ENST00000623242 NR5A1Q13285 461 aa7.11□□□□□ -1.27
ATRX-209ENST00000623242 PPP1R26Q5T8A7 1209 aaPredicted RBP7.11□□□□□ -1.27
ATRX-209ENST00000623242 TMEM164Q5U3C3 297 aa7.11□□□□□ -1.27
ATRX-209ENST00000623242 CCDC125Q86Z20 511 aa7.11□□□□□ -1.27
ATRX-209ENST00000623242 ZNF784Q8NCA9 323 aaPredicted RBP7.11□□□□□ -1.27
ATRX-209ENST00000623242 NOVA2Q9UNW9 492 aaKnown RBP7.11□□□□□ -1.27
ATRX-209ENST00000623242 J3QL48 77 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 CSB-PGBD3P0DP91 1061 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 PDIA4P13667 645 aaKnown RBP7.1□□□□□ -1.27
ATRX-209ENST00000623242 USP4Q13107 963 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 CCDC116Q8IYX3 515 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 CYP4X1Q8N118 509 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 SNIP1Q8TAD8 396 aaKnown RBP7.1□□□□□ -1.27
ATRX-209ENST00000623242 ZNF594Q96JF6 807 aaPredicted RBP7.1□□□□□ -1.27
ATRX-209ENST00000623242 OSBPL3Q9H4L5 887 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 CYLDQ9NQC7 956 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 DNAAF2Q9NVR5 837 aaKnown RBP7.1□□□□□ -1.27
ATRX-209ENST00000623242 TOR4AQ9NXH8 423 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 SLAIN2Q9P270 581 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 NACADO15069 1562 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 RB1CC1Q8TDY2 1594 aa7.1□□□□□ -1.27
ATRX-209ENST00000623242 STAU1O95793 577 aaKnown RBP7.09□□□□□ -1.27
ATRX-209ENST00000623242 ADD1P35611 737 aaKnown RBP7.09□□□□□ -1.27
ATRX-209ENST00000623242 FAM69CQ0P6D2 419 aa7.09□□□□□ -1.27
ATRX-209ENST00000623242 DPYDQ12882 1025 aa7.09□□□□□ -1.27
ATRX-209ENST00000623242 NNTQ13423 1086 aa7.09□□□□□ -1.27
ATRX-209ENST00000623242 ZNF787Q6DD87 383 aa7.09□□□□□ -1.27
ATRX-209ENST00000623242 LARP1Q6PKG0 1096 aaKnown RBP7.09□□□□□ -1.27
ATRX-209ENST00000623242 TRIM50Q86XT4 487 aa7.09□□□□□ -1.27
ATRX-209ENST00000623242 KLF16Q9BXK1 252 aaPredicted RBP7.09□□□□□ -1.27
ATRX-209ENST00000623242 USTQ9Y2C2 406 aa7.09□□□□□ -1.27
ATRX-209ENST00000623242 TTC24A2A3L6 582 aaPredicted RBP7.08□□□□□ -1.28
ATRX-209ENST00000623242 SMPD1P17405 629 aa7.08□□□□□ -1.28
ATRX-209ENST00000623242 MYT1Q01538 1121 aa7.08□□□□□ -1.28
ATRX-209ENST00000623242 DHX9Q08211 1270 aaKnown RBP7.08□□□□□ -1.28
ATRX-209ENST00000623242 CC2D2BQ6DHV5 1058 aa7.08□□□□□ -1.28
ATRX-209ENST00000623242 ANKMY2Q8IV38 441 aa7.08□□□□□ -1.28
ATRX-209ENST00000623242 SIX5Q8N196 739 aa7.08□□□□□ -1.28
ATRX-209ENST00000623242 LARGE2Q8N3Y3 721 aa7.08□□□□□ -1.28
ATRX-209ENST00000623242 DCAF1Q9Y4B6 1507 aa7.07□□□□□ -1.28
ATRX-209ENST00000623242 ATP1A2P50993 1020 aa7.07□□□□□ -1.28
ATRX-209ENST00000623242 CCDC102BQ68D86 513 aa7.07□□□□□ -1.28
ATRX-209ENST00000623242 SFI1A8K8P3 1242 aa7.06□□□□□ -1.28
ATRX-209ENST00000623242 MYCP01106 439 aaPredicted RBP7.06□□□□□ -1.28
ATRX-209ENST00000623242 KDF1Q8NAX2 398 aaPredicted RBP7.06□□□□□ -1.28
ATRX-209ENST00000623242 TPCN2Q8NHX9 752 aa7.06□□□□□ -1.28
ATRX-209ENST00000623242 FAM200AQ8TCP9 573 aa7.06□□□□□ -1.28
ATRX-209ENST00000623242 ITPKCQ96DU7 683 aa7.06□□□□□ -1.28
ATRX-209ENST00000623242 SIRT1Q96EB6 747 aa7.06□□□□□ -1.28
ATRX-209ENST00000623242 WASF2Q9Y6W5 498 aa7.06□□□□□ -1.28
ATRX-209ENST00000623242 TMEM229AB2RXF0 380 aa7.05□□□□□ -1.28
ATRX-209ENST00000623242 SCNN1DP51172 638 aa7.05□□□□□ -1.28
ATRX-209ENST00000623242 TRIM26Q12899 539 aaPredicted RBP7.05□□□□□ -1.28
ATRX-209ENST00000623242 CBLBQ13191 982 aa7.05□□□□□ -1.28
ATRX-209ENST00000623242 CRIPAKQ8N1N5 446 aa7.05□□□□□ -1.28
ATRX-209ENST00000623242 ZFAND3Q9H8U3 227 aa7.05□□□□□ -1.28
ATRX-209ENST00000623242 EMILIN1Q9Y6C2 1016 aa7.05□□□□□ -1.28
ATRX-209ENST00000623242 MYO15BQ96JP2 1530 aa7.05□□□□□ -1.28
ATRX-209ENST00000623242 ST8SIA5O15466 376 aa7.04□□□□□ -1.28
ATRX-209ENST00000623242 AVPP01185 164 aa7.04□□□□□ -1.28
ATRX-209ENST00000623242 TIMP2P16035 220 aa7.04□□□□□ -1.28
ATRX-209ENST00000623242 PSME1Q06323 249 aa7.04□□□□□ -1.28
ATRX-209ENST00000623242 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
ATRX-209ENST00000623242 HPS1Q92902 700 aa7.04□□□□□ -1.28
ATRX-209ENST00000623242 PGPEP1Q9NXJ5 209 aa7.04□□□□□ -1.28
ATRX-209ENST00000623242 SHROOM4Q9ULL8 1493 aa7.04□□□□□ -1.28
ATRX-209ENST00000623242 LGR5O75473 907 aa7.03□□□□□ -1.28
ATRX-209ENST00000623242 ZIC2O95409 532 aaPredicted RBP7.03□□□□□ -1.28
ATRX-209ENST00000623242 SEC13P55735 322 aa7.03□□□□□ -1.28
ATRX-209ENST00000623242 PHLDB3Q6NSJ2 640 aa7.03□□□□□ -1.28
ATRX-209ENST00000623242 ETNK1Q9HBU6 452 aa7.03□□□□□ -1.28
ATRX-209ENST00000623242 ZNF358Q9NW07 568 aa7.03□□□□□ -1.28
ATRX-209ENST00000623242 GDF10P55107 478 aa7.02□□□□□ -1.29
ATRX-209ENST00000623242 WDR4P57081 412 aaKnown RBP7.02□□□□□ -1.29
ATRX-209ENST00000623242 Q6ZVU0 165 aa7.02□□□□□ -1.29
ATRX-209ENST00000623242 CLP1Q92989 425 aaKnown RBP7.02□□□□□ -1.29
ATRX-209ENST00000623242 ADH1AP07327 375 aa7.01□□□□□ -1.29
ATRX-209ENST00000623242 PDE4CQ08493 712 aa7.01□□□□□ -1.29
ATRX-209ENST00000623242 CYP2U1Q7Z449 544 aa7.01□□□□□ -1.29
ATRX-209ENST00000623242 TSEN2Q8NCE0 465 aaKnown RBP7.01□□□□□ -1.29
ATRX-209ENST00000623242 AGBL1Q96MI9 1066 aa7.01□□□□□ -1.29
ATRX-209ENST00000623242 AAASQ9NRG9 546 aa7.01□□□□□ -1.29
ATRX-209ENST00000623242 RAB6BQ9NRW1 208 aa7.01□□□□□ -1.29
ATRX-209ENST00000623242 WASLO00401 505 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms