RNA–Protein interactions for RNA: ENST00000622592.1

AP003900.1-201, humanhuman

TSL 3 BASIC

Gene AP003900.1, Length 859 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-201ENST00000622592 NLRP2Q9NX02 1062 aa17.82■□□□□ 0.44
AP003900.1-201ENST00000622592 RGPD5Q99666 1765 aa17.81■□□□□ 0.44
AP003900.1-201ENST00000622592 IL2RBP14784 551 aa17.81■□□□□ 0.44
AP003900.1-201ENST00000622592 DDX54Q8TDD1 881 aaKnown RBP17.81■□□□□ 0.44
AP003900.1-201ENST00000622592 SYTL4Q96C24 671 aaPredicted RBP17.81■□□□□ 0.44
AP003900.1-201ENST00000622592 IGSF1Q8N6C5 1336 aa17.8■□□□□ 0.44
AP003900.1-201ENST00000622592 TUBGCP6Q96RT7 1819 aa17.8■□□□□ 0.44
AP003900.1-201ENST00000622592 ZBTB22O15209 634 aa17.8■□□□□ 0.44
AP003900.1-201ENST00000622592 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
AP003900.1-201ENST00000622592 CCNL1Q9UK58 526 aaPredicted RBP17.77■□□□□ 0.44
AP003900.1-201ENST00000622592 QSER1Q2KHR3 1735 aa17.77■□□□□ 0.44
AP003900.1-201ENST00000622592 ABCC6O95255 1503 aa17.77■□□□□ 0.43
AP003900.1-201ENST00000622592 SMIM5Q71RC9 77 aa17.76■□□□□ 0.43
AP003900.1-201ENST00000622592 KCNH5Q8NCM2 988 aa17.76■□□□□ 0.43
AP003900.1-201ENST00000622592 TRPM1Q7Z4N2 1603 aa17.75■□□□□ 0.43
AP003900.1-201ENST00000622592 TTC21BQ7Z4L5 1316 aa17.74■□□□□ 0.43
AP003900.1-201ENST00000622592 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
AP003900.1-201ENST00000622592 NBPF1Q3BBV0 1214 aa17.73■□□□□ 0.43
AP003900.1-201ENST00000622592 PIK3C2AO00443 1686 aa17.73■□□□□ 0.43
AP003900.1-201ENST00000622592 AMIGO3Q86WK7 504 aa17.72■□□□□ 0.43
AP003900.1-201ENST00000622592 RBM46Q8TBY0 533 aaKnown RBP17.72■□□□□ 0.43
AP003900.1-201ENST00000622592 ERBB3P21860 1342 aa17.72■□□□□ 0.43
AP003900.1-201ENST00000622592 NSD2O96028 1365 aa17.71■□□□□ 0.43
AP003900.1-201ENST00000622592 HSPA1AP0DMV8 641 aaKnown RBP17.71■□□□□ 0.43
AP003900.1-201ENST00000622592 HSPA1BP0DMV9 641 aaKnown RBP17.71■□□□□ 0.43
AP003900.1-201ENST00000622592 WDR90Q96KV7 1748 aa17.71■□□□□ 0.43
AP003900.1-201ENST00000622592 ANKRD24Q8TF21 1146 aa17.7■□□□□ 0.42
AP003900.1-201ENST00000622592 NFAT5O94916 1531 aa17.67■□□□□ 0.42
AP003900.1-201ENST00000622592 ARHGAP27Q6ZUM4 889 aa17.67■□□□□ 0.42
AP003900.1-201ENST00000622592 C16orf71Q8IYS4 520 aaPredicted RBP17.67■□□□□ 0.42
AP003900.1-201ENST00000622592 ANKRD36BQ8N2N9 1353 aa17.66■□□□□ 0.42
AP003900.1-201ENST00000622592 FSTL1Q12841 308 aa17.65■□□□□ 0.42
AP003900.1-201ENST00000622592 CENPJQ9HC77 1338 aaPredicted RBP17.65■□□□□ 0.42
AP003900.1-201ENST00000622592 LTV1Q96GA3 475 aaPredicted RBP17.64■□□□□ 0.41
AP003900.1-201ENST00000622592 BCS1LQ9Y276 419 aa17.64■□□□□ 0.41
AP003900.1-201ENST00000622592 PHF14O94880 888 aa17.63■□□□□ 0.41
AP003900.1-201ENST00000622592 RRAGCQ9HB90 399 aa17.63■□□□□ 0.41
AP003900.1-201ENST00000622592 A0A0G2JLW4 131 aa17.62■□□□□ 0.41
AP003900.1-201ENST00000622592 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.62■□□□□ 0.41
AP003900.1-201ENST00000622592 STAC3Q96MF2 364 aa17.62■□□□□ 0.41
AP003900.1-201ENST00000622592 C9orf131Q5VYM1 1079 aa17.61■□□□□ 0.41
AP003900.1-201ENST00000622592 FLAD1Q8NFF5 587 aa17.61■□□□□ 0.41
AP003900.1-201ENST00000622592 ZNF692Q9BU19 519 aaPredicted RBP17.61■□□□□ 0.41
AP003900.1-201ENST00000622592 USP47Q96K76 1375 aa17.61■□□□□ 0.41
AP003900.1-201ENST00000622592 LY75O60449 1722 aa17.61■□□□□ 0.41
AP003900.1-201ENST00000622592 TTC21AQ8NDW8 1320 aa17.6■□□□□ 0.41
AP003900.1-201ENST00000622592 NME9Q86XW9 330 aa17.59■□□□□ 0.41
AP003900.1-201ENST00000622592 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.58■□□□□ 0.4
AP003900.1-201ENST00000622592 ZCRB1Q8TBF4 217 aaKnown RBP17.58■□□□□ 0.4
AP003900.1-201ENST00000622592 CICQ96RK0 1608 aaPredicted RBP17.57■□□□□ 0.4
AP003900.1-201ENST00000622592 AK7Q96M32 723 aa17.56■□□□□ 0.4
AP003900.1-201ENST00000622592 PCDH10Q9P2E7 1040 aa17.56■□□□□ 0.4
AP003900.1-201ENST00000622592 KCPQ6ZWJ8 1503 aa17.56■□□□□ 0.4
AP003900.1-201ENST00000622592 FCHSD2O94868 740 aa17.55■□□□□ 0.4
AP003900.1-201ENST00000622592 PXDNLA1KZ92 1463 aa17.55■□□□□ 0.4
AP003900.1-201ENST00000622592 KTN1Q86UP2 1357 aaKnown RBP17.54■□□□□ 0.4
AP003900.1-201ENST00000622592 DPEP1P16444 411 aa17.54■□□□□ 0.4
AP003900.1-201ENST00000622592 DOT1LQ8TEK3 1739 aa17.54■□□□□ 0.4
AP003900.1-201ENST00000622592 QRICH2Q9H0J4 1663 aa17.54■□□□□ 0.4
AP003900.1-201ENST00000622592 MMP10P09238 476 aa17.53■□□□□ 0.4
AP003900.1-201ENST00000622592 FAM161AQ3B820 660 aa17.53■□□□□ 0.4
AP003900.1-201ENST00000622592 SMC1BQ8NDV3 1235 aa17.53■□□□□ 0.4
AP003900.1-201ENST00000622592 EVC2Q86UK5 1308 aa17.52■□□□□ 0.4
AP003900.1-201ENST00000622592 MPRIPQ6WCQ1 1025 aa17.52■□□□□ 0.4
AP003900.1-201ENST00000622592 USP31Q70CQ4 1352 aa17.52■□□□□ 0.39
AP003900.1-201ENST00000622592 PALLDQ8WX93 1383 aa17.52■□□□□ 0.39
AP003900.1-201ENST00000622592 FBLN1P23142 703 aa17.51■□□□□ 0.39
AP003900.1-201ENST00000622592 IP6K1Q92551 441 aa17.51■□□□□ 0.39
AP003900.1-201ENST00000622592 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
AP003900.1-201ENST00000622592 KDM2BQ8NHM5 1336 aa17.5■□□□□ 0.39
AP003900.1-201ENST00000622592 TGFB2P61812 414 aa17.5■□□□□ 0.39
AP003900.1-201ENST00000622592 RNF181Q9P0P0 153 aa17.5■□□□□ 0.39
AP003900.1-201ENST00000622592 FOXN1O15353 648 aa17.49■□□□□ 0.39
AP003900.1-201ENST00000622592 LINC00116Q8NCU8 138 aa17.49■□□□□ 0.39
AP003900.1-201ENST00000622592 C5P01031 1676 aa17.48■□□□□ 0.39
AP003900.1-201ENST00000622592 USP54Q70EL1 1684 aa17.48■□□□□ 0.39
AP003900.1-201ENST00000622592 MEGF6O75095 1541 aa17.48■□□□□ 0.39
AP003900.1-201ENST00000622592 KCNA3P22001 575 aa17.48■□□□□ 0.39
AP003900.1-201ENST00000622592 TOGARAM1Q9Y4F4 1720 aa17.47■□□□□ 0.39
AP003900.1-201ENST00000622592 USHBP1Q8N6Y0 703 aa17.47■□□□□ 0.39
AP003900.1-201ENST00000622592 N4BP2Q86UW6 1770 aaPredicted RBP17.47■□□□□ 0.39
AP003900.1-201ENST00000622592 SSFA2P28290 1259 aa17.46■□□□□ 0.39
AP003900.1-201ENST00000622592 MKRN1Q9UHC7 482 aaKnown RBP17.46■□□□□ 0.39
AP003900.1-201ENST00000622592 RAB3GAP2Q9H2M9 1393 aa17.45■□□□□ 0.38
AP003900.1-201ENST00000622592 C4BP0C0L5 1744 aa17.45■□□□□ 0.38
AP003900.1-201ENST00000622592 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
AP003900.1-201ENST00000622592 PLEKHG2Q9H7P9 1386 aa17.44■□□□□ 0.38
AP003900.1-201ENST00000622592 SBNO2Q9Y2G9 1366 aa17.44■□□□□ 0.38
AP003900.1-201ENST00000622592 LTN1O94822 1766 aa17.44■□□□□ 0.38
AP003900.1-201ENST00000622592 GNPATO15228 680 aa17.44■□□□□ 0.38
AP003900.1-201ENST00000622592 NBPF6Q5VWK0 638 aa17.44■□□□□ 0.38
AP003900.1-201ENST00000622592 NBPF4Q96M43 638 aa17.44■□□□□ 0.38
AP003900.1-201ENST00000622592 ATXN8OSP0DMR3 200 aa17.43■□□□□ 0.38
AP003900.1-201ENST00000622592 KIAA1551Q9HCM1 1747 aa17.43■□□□□ 0.38
AP003900.1-201ENST00000622592 C10orf71Q711Q0 1435 aa17.42■□□□□ 0.38
AP003900.1-201ENST00000622592 ITPK1Q13572 414 aa17.42■□□□□ 0.38
AP003900.1-201ENST00000622592 PIGBQ92521 554 aa17.42■□□□□ 0.38
AP003900.1-201ENST00000622592 TAF1LQ8IZX4 1826 aa17.42■□□□□ 0.38
AP003900.1-201ENST00000622592 HOXC9P31274 260 aa17.41■□□□□ 0.38
AP003900.1-201ENST00000622592 DCAF5Q96JK2 942 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms