RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MYO5BQ9ULV0 1848 aa19.39■□□□□ 0.69
NPHP4-211ENST00000622020 NSFL1CQ9UNZ2 370 aaKnown RBP19.39■□□□□ 0.69
NPHP4-211ENST00000622020 ZFYVE9O95405 1425 aa19.39■□□□□ 0.69
NPHP4-211ENST00000622020 ANKRD44Q8N8A2 993 aa19.38■□□□□ 0.69
NPHP4-211ENST00000622020 EXOC6BQ9Y2D4 811 aa19.38■□□□□ 0.69
NPHP4-211ENST00000622020 PIK3R4Q99570 1358 aa19.38■□□□□ 0.69
NPHP4-211ENST00000622020 MSH6P52701 1360 aa19.37■□□□□ 0.69
NPHP4-211ENST00000622020 RIMS2Q9UQ26 1411 aa19.37■□□□□ 0.69
NPHP4-211ENST00000622020 NEK4P51957 841 aa19.37■□□□□ 0.69
NPHP4-211ENST00000622020 NUCB2P80303 420 aa19.37■□□□□ 0.69
NPHP4-211ENST00000622020 RBM10P98175 930 aaKnown RBP19.37■□□□□ 0.69
NPHP4-211ENST00000622020 LMOD3Q0VAK6 560 aa19.37■□□□□ 0.69
NPHP4-211ENST00000622020 CASC1Q6TDU7 716 aa19.37■□□□□ 0.69
NPHP4-211ENST00000622020 MPNDQ8N594 471 aa19.37■□□□□ 0.69
NPHP4-211ENST00000622020 NUDT16Q96DE0 195 aaKnown RBP19.37■□□□□ 0.69
NPHP4-211ENST00000622020 ARID3AQ99856 593 aa19.37■□□□□ 0.69
NPHP4-211ENST00000622020 ST18O60284 1047 aa19.37■□□□□ 0.69
NPHP4-211ENST00000622020 GPT2Q8TD30 523 aa19.37■□□□□ 0.69
NPHP4-211ENST00000622020 ARHGEF40Q8TER5 1519 aa19.36■□□□□ 0.69
NPHP4-211ENST00000622020 FOXO3O43524 673 aa19.36■□□□□ 0.69
NPHP4-211ENST00000622020 PTMSP20962 102 aa19.36■□□□□ 0.69
NPHP4-211ENST00000622020 G2E3Q7L622 706 aa19.36■□□□□ 0.69
NPHP4-211ENST00000622020 MAP2P11137 1827 aaKnown RBP19.36■□□□□ 0.69
NPHP4-211ENST00000622020 SYCE3A1L190 88 aa19.36■□□□□ 0.69
NPHP4-211ENST00000622020 ZDHHC9Q9Y397 364 aa19.36■□□□□ 0.69
NPHP4-211ENST00000622020 WASLO00401 505 aaPredicted RBP19.35■□□□□ 0.69
NPHP4-211ENST00000622020 ZSCAN30Q86W11 494 aa19.35■□□□□ 0.69
NPHP4-211ENST00000622020 XPCQ01831 940 aaPredicted RBP19.35■□□□□ 0.69
NPHP4-211ENST00000622020 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.35■□□□□ 0.69
NPHP4-211ENST00000622020 HSP90AB2PQ58FF8 381 aa19.34■□□□□ 0.69
NPHP4-211ENST00000622020 RILPL2Q969X0 211 aa19.34■□□□□ 0.69
NPHP4-211ENST00000622020 EIF4A2Q14240 407 aaKnown RBP19.33■□□□□ 0.69
NPHP4-211ENST00000622020 DTNBO60941 627 aa19.33■□□□□ 0.68
NPHP4-211ENST00000622020 PPP1R9BQ96SB3 815 aa19.33■□□□□ 0.68
NPHP4-211ENST00000622020 R3HCC1Q9Y3T6 440 aaKnown RBP19.33■□□□□ 0.68
NPHP4-211ENST00000622020 RPAP2Q8IXW5 612 aaPredicted RBP19.33■□□□□ 0.68
NPHP4-211ENST00000622020 GDPD2Q9HCC8 539 aa19.33■□□□□ 0.68
NPHP4-211ENST00000622020 TRIM6-TRIM34B2RNG4 842 aa19.32■□□□□ 0.68
NPHP4-211ENST00000622020 TMEM63CQ9P1W3 806 aa19.32■□□□□ 0.68
NPHP4-211ENST00000622020 RTL1A6NKG5 1358 aa19.31■□□□□ 0.68
NPHP4-211ENST00000622020 ALKQ9UM73 1620 aa19.31■□□□□ 0.68
NPHP4-211ENST00000622020 ERC2O15083 957 aa19.31■□□□□ 0.68
NPHP4-211ENST00000622020 RRP9O43818 475 aaKnown RBP19.31■□□□□ 0.68
NPHP4-211ENST00000622020 REC8O95072 547 aa19.31■□□□□ 0.68
NPHP4-211ENST00000622020 UPF3BQ9BZI7 483 aaKnown RBP19.31■□□□□ 0.68
NPHP4-211ENST00000622020 CYP2E1P05181 493 aaPredicted RBP19.3■□□□□ 0.68
NPHP4-211ENST00000622020 KNDC1Q76NI1 1749 aa19.3■□□□□ 0.68
NPHP4-211ENST00000622020 ATP10DQ9P241 1426 aa19.3■□□□□ 0.68
NPHP4-211ENST00000622020 CLEC17AQ6ZS10 378 aa19.3■□□□□ 0.68
NPHP4-211ENST00000622020 ANO2Q9NQ90 1003 aa19.3■□□□□ 0.68
NPHP4-211ENST00000622020 PALD1Q9ULE6 856 aa19.3■□□□□ 0.68
NPHP4-211ENST00000622020 CCDC61Q9Y6R9 512 aa19.3■□□□□ 0.68
NPHP4-211ENST00000622020 PDE1AP54750 535 aa19.29■□□□□ 0.68
NPHP4-211ENST00000622020 ZNF445P59923 1031 aa19.29■□□□□ 0.68
NPHP4-211ENST00000622020 TMX3Q96JJ7 454 aa19.29■□□□□ 0.68
NPHP4-211ENST00000622020 LARP6Q9BRS8 491 aaKnown RBP19.29■□□□□ 0.68
NPHP4-211ENST00000622020 CHL1O00533 1208 aa19.28■□□□□ 0.68
NPHP4-211ENST00000622020 MAP4K4O95819 1239 aaPredicted RBP19.28■□□□□ 0.68
NPHP4-211ENST00000622020 TSPYL4Q9UJ04 414 aa19.27■□□□□ 0.68
NPHP4-211ENST00000622020 FAM13BQ9NYF5 915 aa19.27■□□□□ 0.68
NPHP4-211ENST00000622020 ANKRD26Q9UPS8 1709 aa19.27■□□□□ 0.68
NPHP4-211ENST00000622020 CWC22Q9HCG8 908 aaKnown RBP19.27■□□□□ 0.67
NPHP4-211ENST00000622020 DIP2CQ9Y2E4 1556 aa19.26■□□□□ 0.67
NPHP4-211ENST00000622020 TMEM131LA2VDJ0 1609 aa19.26■□□□□ 0.67
NPHP4-211ENST00000622020 KIF20BQ96Q89 1820 aa19.26■□□□□ 0.67
NPHP4-211ENST00000622020 METP08581 1390 aa19.26■□□□□ 0.67
NPHP4-211ENST00000622020 ARHGAP31Q2M1Z3 1444 aa19.26■□□□□ 0.67
NPHP4-211ENST00000622020 CPS1P31327 1500 aa19.26■□□□□ 0.67
NPHP4-211ENST00000622020 IL1RAPL2Q9NP60 686 aa19.25■□□□□ 0.67
NPHP4-211ENST00000622020 RGS12O14924 1447 aa19.25■□□□□ 0.67
NPHP4-211ENST00000622020 EDC4Q6P2E9 1401 aaKnown RBP19.24■□□□□ 0.67
NPHP4-211ENST00000622020 PNMA6EA0A0J9YXQ4 647 aa19.24■□□□□ 0.67
NPHP4-211ENST00000622020 HMMRO75330 724 aa19.24■□□□□ 0.67
NPHP4-211ENST00000622020 RIMBP3CA6NJZ7 1639 aa19.24■□□□□ 0.67
NPHP4-211ENST00000622020 RIMBP3BA6NNM3 1639 aa19.24■□□□□ 0.67
NPHP4-211ENST00000622020 RIMBP3Q9UFD9 1639 aa19.24■□□□□ 0.67
NPHP4-211ENST00000622020 OFD1O75665 1012 aa19.24■□□□□ 0.67
NPHP4-211ENST00000622020 UNC5CLQ8IV45 518 aa19.24■□□□□ 0.67
NPHP4-211ENST00000622020 PRR36Q9H6K5 1346 aa19.23■□□□□ 0.67
NPHP4-211ENST00000622020 FKBP5Q13451 457 aaPredicted RBP19.23■□□□□ 0.67
NPHP4-211ENST00000622020 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
NPHP4-211ENST00000622020 RTF1Q92541 710 aaKnown RBP19.23■□□□□ 0.67
NPHP4-211ENST00000622020 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.23■□□□□ 0.67
NPHP4-211ENST00000622020 DLG5Q8TDM6 1919 aa19.23■□□□□ 0.67
NPHP4-211ENST00000622020 TPM2P07951 284 aa19.22■□□□□ 0.67
NPHP4-211ENST00000622020 MTHFSDQ2M296 383 aaKnown RBP19.22■□□□□ 0.67
NPHP4-211ENST00000622020 CDC42BPGQ6DT37 1551 aa19.22■□□□□ 0.67
NPHP4-211ENST00000622020 PTMAP06454 111 aaKnown RBP19.22■□□□□ 0.67
NPHP4-211ENST00000622020 ATP7BP35670 1465 aa19.21■□□□□ 0.67
NPHP4-211ENST00000622020 GADD45BO75293 160 aaPredicted RBP19.21■□□□□ 0.67
NPHP4-211ENST00000622020 CPSF1Q10570 1443 aaKnown RBP19.21■□□□□ 0.67
NPHP4-211ENST00000622020 CDK12Q9NYV4 1490 aaPredicted RBP19.21■□□□□ 0.67
NPHP4-211ENST00000622020 LRSAM1Q6UWE0 723 aa19.21■□□□□ 0.67
NPHP4-211ENST00000622020 IL25Q9H293 177 aa19.21■□□□□ 0.67
NPHP4-211ENST00000622020 IBTKQ9P2D0 1353 aaPredicted RBP19.21■□□□□ 0.67
NPHP4-211ENST00000622020 NUTM1Q86Y26 1132 aa19.2■□□□□ 0.66
NPHP4-211ENST00000622020 ESYT1Q9BSJ8 1104 aa19.2■□□□□ 0.66
NPHP4-211ENST00000622020 GNAI2P04899 355 aa19.2■□□□□ 0.66
NPHP4-211ENST00000622020 PTPRCP08575 1304 aa19.2■□□□□ 0.66
NPHP4-211ENST00000622020 MX1P20591 662 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms