RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 DOT1LQ8TEK3 1739 aa16.36■□□□□ 0.21
COL8A1-208ENST00000621757 RREB1Q92766 1687 aa16.35■□□□□ 0.21
COL8A1-208ENST00000621757 RGPD3A6NKT7 1758 aaPredicted RBP16.35■□□□□ 0.21
COL8A1-208ENST00000621757 RGPD4Q7Z3J3 1758 aa16.35■□□□□ 0.21
COL8A1-208ENST00000621757 TATP17735 454 aaPredicted RBP16.34■□□□□ 0.21
COL8A1-208ENST00000621757 IGSF1Q8N6C5 1336 aa16.34■□□□□ 0.21
COL8A1-208ENST00000621757 LRP5O75197 1615 aa16.34■□□□□ 0.21
COL8A1-208ENST00000621757 APBA3O96018 575 aa16.33■□□□□ 0.2
COL8A1-208ENST00000621757 MTHFSP49914 203 aa16.33■□□□□ 0.2
COL8A1-208ENST00000621757 PTF1AQ7RTS3 328 aa16.33■□□□□ 0.2
COL8A1-208ENST00000621757 ZCRB1Q8TBF4 217 aaKnown RBP16.33■□□□□ 0.2
COL8A1-208ENST00000621757 DDX54Q8TDD1 881 aaKnown RBP16.33■□□□□ 0.2
COL8A1-208ENST00000621757 COL3A1P02461 1466 aaPredicted RBP16.32■□□□□ 0.2
COL8A1-208ENST00000621757 NUP188Q5SRE5 1749 aa16.32■□□□□ 0.2
COL8A1-208ENST00000621757 BTAF1O14981 1849 aa16.31■□□□□ 0.2
COL8A1-208ENST00000621757 ACSBG1Q96GR2 724 aa16.31■□□□□ 0.2
COL8A1-208ENST00000621757 BCL11BQ9C0K0 894 aaPredicted RBP16.31■□□□□ 0.2
COL8A1-208ENST00000621757 PARD3Q8TEW0 1356 aa16.3■□□□□ 0.2
COL8A1-208ENST00000621757 PCDH11XQ9BZA7 1347 aa16.3■□□□□ 0.2
COL8A1-208ENST00000621757 PCDH11YQ9BZA8 1340 aa16.3■□□□□ 0.2
COL8A1-208ENST00000621757 IL13P35225 146 aa16.3■□□□□ 0.2
COL8A1-208ENST00000621757 R3HDM1Q15032 1099 aaKnown RBP16.3■□□□□ 0.2
COL8A1-208ENST00000621757 EZH2Q15910 746 aaKnown RBP16.3■□□□□ 0.2
COL8A1-208ENST00000621757 CAMKK2Q96RR4 588 aa16.3■□□□□ 0.2
COL8A1-208ENST00000621757 TOGARAM1Q9Y4F4 1720 aa16.29■□□□□ 0.2
COL8A1-208ENST00000621757 KCNQ2O43526 872 aa16.29■□□□□ 0.2
COL8A1-208ENST00000621757 AEBP1Q8IUX7 1158 aa16.28■□□□□ 0.2
COL8A1-208ENST00000621757 KAT6BQ8WYB5 2073 aa16.28■□□□□ 0.2
COL8A1-208ENST00000621757 KDRP35968 1356 aa16.27■□□□□ 0.2
COL8A1-208ENST00000621757 PLEKHG2Q9H7P9 1386 aa16.27■□□□□ 0.2
COL8A1-208ENST00000621757 CYP27B1O15528 508 aa16.26■□□□□ 0.19
COL8A1-208ENST00000621757 DDX10Q13206 875 aaKnown RBP16.26■□□□□ 0.19
COL8A1-208ENST00000621757 DIAPH1O60610 1272 aaKnown RBP16.25■□□□□ 0.19
COL8A1-208ENST00000621757 PPP2R1AP30153 589 aa16.25■□□□□ 0.19
COL8A1-208ENST00000621757 SULT6B1Q6IMI4 303 aa16.25■□□□□ 0.19
COL8A1-208ENST00000621757 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
COL8A1-208ENST00000621757 PLSCR1O15162 318 aa16.24■□□□□ 0.19
COL8A1-208ENST00000621757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL8A1-208ENST00000621757 SYTL4Q96C24 671 aaPredicted RBP16.23■□□□□ 0.19
COL8A1-208ENST00000621757 ITGB4P16144 1822 aa16.23■□□□□ 0.19
COL8A1-208ENST00000621757 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
COL8A1-208ENST00000621757 HMOX1P09601 288 aa16.21■□□□□ 0.19
COL8A1-208ENST00000621757 PHKG2P15735 406 aa16.21■□□□□ 0.19
COL8A1-208ENST00000621757 CFAP53Q96M91 514 aa16.21■□□□□ 0.19
COL8A1-208ENST00000621757 PAPPAQ13219 1627 aa16.2■□□□□ 0.18
COL8A1-208ENST00000621757 LY75O60449 1722 aa16.2■□□□□ 0.18
COL8A1-208ENST00000621757 IFNL2Q8IZJ0 200 aa16.2■□□□□ 0.18
COL8A1-208ENST00000621757 U2SURPO15042 1029 aaKnown RBP16.19■□□□□ 0.18
COL8A1-208ENST00000621757 NKX1-1Q15270 411 aaPredicted RBP16.19■□□□□ 0.18
COL8A1-208ENST00000621757 TXNRD1Q16881 649 aa16.19■□□□□ 0.18
COL8A1-208ENST00000621757 PLEKHO1Q53GL0 409 aaPredicted RBP16.19■□□□□ 0.18
COL8A1-208ENST00000621757 PROM2Q8N271 834 aa16.19■□□□□ 0.18
COL8A1-208ENST00000621757 AMOTQ4VCS5 1084 aa16.18■□□□□ 0.18
COL8A1-208ENST00000621757 ZNF530Q6P9A1 599 aaPredicted RBP16.18■□□□□ 0.18
COL8A1-208ENST00000621757 KDM6AO15550 1401 aaPredicted RBP16.18■□□□□ 0.18
COL8A1-208ENST00000621757 ANO8Q9HCE9 1232 aaPredicted RBP16.16■□□□□ 0.18
COL8A1-208ENST00000621757 RALBP1Q15311 655 aa16.15■□□□□ 0.18
COL8A1-208ENST00000621757 MPRIPQ6WCQ1 1025 aa16.15■□□□□ 0.18
COL8A1-208ENST00000621757 SCN11AQ9UI33 1791 aa16.15■□□□□ 0.18
COL8A1-208ENST00000621757 VIRMAQ69YN4 1812 aaKnown RBP16.15■□□□□ 0.18
COL8A1-208ENST00000621757 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
COL8A1-208ENST00000621757 HSP90AB1P08238 724 aaKnown RBP16.14■□□□□ 0.17
COL8A1-208ENST00000621757 C1orf141Q5JVX7 400 aa16.14■□□□□ 0.17
COL8A1-208ENST00000621757 NBPF14Q5TI25 921 aa16.14■□□□□ 0.17
COL8A1-208ENST00000621757 PALLDQ8WX93 1383 aa16.13■□□□□ 0.17
COL8A1-208ENST00000621757 PIGBQ92521 554 aa16.13■□□□□ 0.17
COL8A1-208ENST00000621757 DCAF5Q96JK2 942 aa16.13■□□□□ 0.17
COL8A1-208ENST00000621757 LRRC4BQ9NT99 713 aa16.13■□□□□ 0.17
COL8A1-208ENST00000621757 NUDCQ9Y266 331 aa16.13■□□□□ 0.17
COL8A1-208ENST00000621757 C5P01031 1676 aa16.12■□□□□ 0.17
COL8A1-208ENST00000621757 ADAMTS7Q9UKP4 1686 aa16.12■□□□□ 0.17
COL8A1-208ENST00000621757 RSPH6AQ9H0K4 717 aa16.12■□□□□ 0.17
COL8A1-208ENST00000621757 TMOD3Q9NYL9 352 aa16.12■□□□□ 0.17
COL8A1-208ENST00000621757 CASZ1Q86V15 1759 aa16.12■□□□□ 0.17
COL8A1-208ENST00000621757 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
COL8A1-208ENST00000621757 MRC1P22897 1456 aa16.11■□□□□ 0.17
COL8A1-208ENST00000621757 U2AF1L5P0DN76 240 aaPredicted RBP16.11■□□□□ 0.17
COL8A1-208ENST00000621757 PRKAR2BP31323 418 aa16.11■□□□□ 0.17
COL8A1-208ENST00000621757 U2AF1Q01081 240 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL8A1-208ENST00000621757 MTHFSDQ2M296 383 aaKnown RBP16.11■□□□□ 0.17
COL8A1-208ENST00000621757 AKAP4Q5JQC9 854 aa16.11■□□□□ 0.17
COL8A1-208ENST00000621757 SLC27A3Q5K4L6 730 aa16.11■□□□□ 0.17
COL8A1-208ENST00000621757 TUBGCP6Q96RT7 1819 aa16.1■□□□□ 0.17
COL8A1-208ENST00000621757 KCNQ4P56696 695 aa16.1■□□□□ 0.17
COL8A1-208ENST00000621757 CCNL1Q9UK58 526 aaPredicted RBP16.1■□□□□ 0.17
COL8A1-208ENST00000621757 TAF1LQ8IZX4 1826 aa16.1■□□□□ 0.17
COL8A1-208ENST00000621757 ERVV-2B6SEH9 535 aa16.09■□□□□ 0.17
COL8A1-208ENST00000621757 STK32BQ9NY57 414 aa16.09■□□□□ 0.17
COL8A1-208ENST00000621757 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
COL8A1-208ENST00000621757 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
COL8A1-208ENST00000621757 PRKRIP1Q9H875 184 aaPredicted RBP16.08■□□□□ 0.16
COL8A1-208ENST00000621757 MAP3K5Q99683 1374 aa16.08■□□□□ 0.16
COL8A1-208ENST00000621757 QSER1Q2KHR3 1735 aa16.08■□□□□ 0.16
COL8A1-208ENST00000621757 CABP4P57796 275 aa16.07■□□□□ 0.16
COL8A1-208ENST00000621757 SLC15A2Q16348 729 aa16.07■□□□□ 0.16
COL8A1-208ENST00000621757 GAS2L2Q8NHY3 880 aa16.07■□□□□ 0.16
COL8A1-208ENST00000621757 PHACTR3Q96KR7 559 aa16.07■□□□□ 0.16
COL8A1-208ENST00000621757 ASAP1Q9ULH1 1129 aa16.07■□□□□ 0.16
COL8A1-208ENST00000621757 FCHSD2O94868 740 aa16.06■□□□□ 0.16
COL8A1-208ENST00000621757 SPON1Q9HCB6 807 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms