RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 PRIM1P49642 420 aaKnown RBP23.69■■□□□ 1.38
TARDBP-225ENST00000621715 MAP3K5Q99683 1374 aa23.68■■□□□ 1.38
TARDBP-225ENST00000621715 ANKRD36BQ8N2N9 1353 aa23.66■■□□□ 1.38
TARDBP-225ENST00000621715 COG3Q96JB2 828 aa23.66■■□□□ 1.38
TARDBP-225ENST00000621715 RRS1Q15050 365 aaKnown RBP23.65■■□□□ 1.38
TARDBP-225ENST00000621715 SYTL4Q96C24 671 aaPredicted RBP23.65■■□□□ 1.38
TARDBP-225ENST00000621715 SLC27A3Q5K4L6 730 aa23.64■■□□□ 1.37
TARDBP-225ENST00000621715 AMPHP49418 695 aa23.63■■□□□ 1.37
TARDBP-225ENST00000621715 NBPF6Q5VWK0 638 aa23.63■■□□□ 1.37
TARDBP-225ENST00000621715 USHBP1Q8N6Y0 703 aa23.63■■□□□ 1.37
TARDBP-225ENST00000621715 NBPF4Q96M43 638 aa23.63■■□□□ 1.37
TARDBP-225ENST00000621715 ZCRB1Q8TBF4 217 aaKnown RBP23.61■■□□□ 1.37
TARDBP-225ENST00000621715 GGNBP2Q9H3C7 697 aa23.61■■□□□ 1.37
TARDBP-225ENST00000621715 FYB1O15117 783 aa23.6■■□□□ 1.37
TARDBP-225ENST00000621715 NLGN2Q8NFZ4 835 aa23.59■■□□□ 1.37
TARDBP-225ENST00000621715 TFCP2L1Q9NZI6 479 aa23.59■■□□□ 1.37
TARDBP-225ENST00000621715 RTL1A6NKG5 1358 aa23.58■■□□□ 1.37
TARDBP-225ENST00000621715 KLHL34Q8N239 644 aa23.58■■□□□ 1.37
TARDBP-225ENST00000621715 SLC16A10Q8TF71 515 aa23.58■■□□□ 1.37
TARDBP-225ENST00000621715 KIF20BQ96Q89 1820 aa23.56■■□□□ 1.36
TARDBP-225ENST00000621715 TOGARAM1Q9Y4F4 1720 aa23.56■■□□□ 1.36
TARDBP-225ENST00000621715 GPR162Q16538 588 aa23.55■■□□□ 1.36
TARDBP-225ENST00000621715 HSP90AB2PQ58FF8 381 aa23.55■■□□□ 1.36
TARDBP-225ENST00000621715 CCNL1Q9UK58 526 aaPredicted RBP23.55■■□□□ 1.36
TARDBP-225ENST00000621715 C5P01031 1676 aa23.54■■□□□ 1.36
TARDBP-225ENST00000621715 COL23A1Q86Y22 540 aaPredicted RBP23.54■■□□□ 1.36
TARDBP-225ENST00000621715 TAF1LQ8IZX4 1826 aa23.53■■□□□ 1.36
TARDBP-225ENST00000621715 USP47Q96K76 1375 aa23.52■■□□□ 1.36
TARDBP-225ENST00000621715 POLD1P28340 1107 aa23.52■■□□□ 1.36
TARDBP-225ENST00000621715 ITGB4P16144 1822 aa23.5■■□□□ 1.35
TARDBP-225ENST00000621715 CEP350Q5VT06 3117 aa23.5■■□□□ 1.35
TARDBP-225ENST00000621715 YBX3P16989 372 aaKnown RBP eCLIP23.5■■□□□ 1.35
TARDBP-225ENST00000621715 MSL1Q68DK7 614 aa23.5■■□□□ 1.35
TARDBP-225ENST00000621715 AMIGO3Q86WK7 504 aa23.5■■□□□ 1.35
TARDBP-225ENST00000621715 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
TARDBP-225ENST00000621715 CARD14Q9BXL6 1004 aa23.5■■□□□ 1.35
TARDBP-225ENST00000621715 INSRP06213 1382 aa23.5■■□□□ 1.35
TARDBP-225ENST00000621715 CYP27B1O15528 508 aa23.48■■□□□ 1.35
TARDBP-225ENST00000621715 C1QTNF8P60827 252 aa23.48■■□□□ 1.35
TARDBP-225ENST00000621715 TMF1P82094 1093 aa23.48■■□□□ 1.35
TARDBP-225ENST00000621715 RAPGEF4Q8WZA2 1011 aa23.48■■□□□ 1.35
TARDBP-225ENST00000621715 CGNL1Q0VF96 1302 aa23.47■■□□□ 1.35
TARDBP-225ENST00000621715 PKD1L3Q7Z443 1732 aa23.47■■□□□ 1.35
TARDBP-225ENST00000621715 MSH5O43196 834 aa23.46■■□□□ 1.35
TARDBP-225ENST00000621715 FLT4P35916 1363 aa23.46■■□□□ 1.35
TARDBP-225ENST00000621715 SMIM5Q71RC9 77 aa23.46■■□□□ 1.35
TARDBP-225ENST00000621715 SMG6Q86US8 1419 aaKnown RBP23.46■■□□□ 1.35
TARDBP-225ENST00000621715 EMILIN1Q9Y6C2 1016 aa23.46■■□□□ 1.35
TARDBP-225ENST00000621715 PALLDQ8WX93 1383 aa23.45■■□□□ 1.34
TARDBP-225ENST00000621715 TATP17735 454 aaPredicted RBP23.45■■□□□ 1.34
TARDBP-225ENST00000621715 PCDH11XQ9BZA7 1347 aa23.44■■□□□ 1.34
TARDBP-225ENST00000621715 PCDH11YQ9BZA8 1340 aa23.44■■□□□ 1.34
TARDBP-225ENST00000621715 C4BP0C0L5 1744 aa23.44■■□□□ 1.34
TARDBP-225ENST00000621715 ANKRD26Q9UPS8 1709 aa23.44■■□□□ 1.34
TARDBP-225ENST00000621715 NCAPD2Q15021 1401 aa23.43■■□□□ 1.34
TARDBP-225ENST00000621715 SENP3-EIF4A1A0A087X0R7 540 aa23.43■■□□□ 1.34
TARDBP-225ENST00000621715 SLC24A1O60721 1099 aa23.43■■□□□ 1.34
TARDBP-225ENST00000621715 MPRIPQ6WCQ1 1025 aa23.43■■□□□ 1.34
TARDBP-225ENST00000621715 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
TARDBP-225ENST00000621715 NSD3Q9BZ95 1437 aa23.42■■□□□ 1.34
TARDBP-225ENST00000621715 UBR3Q6ZT12 1888 aa23.42■■□□□ 1.34
TARDBP-225ENST00000621715 KIF24Q5T7B8 1368 aa23.4■■□□□ 1.34
TARDBP-225ENST00000621715 PIGBQ92521 554 aa23.38■■□□□ 1.33
TARDBP-225ENST00000621715 PPM1GO15355 546 aaPredicted RBP23.34■■□□□ 1.33
TARDBP-225ENST00000621715 GIGYF1O75420 1035 aaPredicted RBP23.34■■□□□ 1.33
TARDBP-225ENST00000621715 NKX1-1Q15270 411 aaPredicted RBP23.34■■□□□ 1.33
TARDBP-225ENST00000621715 LINC00116Q8NCU8 138 aa23.33■■□□□ 1.33
TARDBP-225ENST00000621715 EYA1Q99502 592 aa23.33■■□□□ 1.33
TARDBP-225ENST00000621715 PHF14O94880 888 aa23.32■■□□□ 1.32
TARDBP-225ENST00000621715 CD2APQ9Y5K6 639 aa23.32■■□□□ 1.32
TARDBP-225ENST00000621715 GRIN3BO60391 1043 aa23.31■■□□□ 1.32
TARDBP-225ENST00000621715 CDCA8Q53HL2 280 aa23.31■■□□□ 1.32
TARDBP-225ENST00000621715 WWC3Q9ULE0 1092 aa23.31■■□□□ 1.32
TARDBP-225ENST00000621715 WASHC2AQ641Q2 1341 aa23.31■■□□□ 1.32
TARDBP-225ENST00000621715 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.3■■□□□ 1.32
TARDBP-225ENST00000621715 ITPK1Q13572 414 aa23.3■■□□□ 1.32
TARDBP-225ENST00000621715 AK7Q96M32 723 aa23.3■■□□□ 1.32
TARDBP-225ENST00000621715 ASAP1Q9ULH1 1129 aa23.3■■□□□ 1.32
TARDBP-225ENST00000621715 ATP10DQ9P241 1426 aa23.3■■□□□ 1.32
TARDBP-225ENST00000621715 LOC102724428A0A0B4J2F2 783 aa23.29■■□□□ 1.32
TARDBP-225ENST00000621715 SIK1P57059 783 aa23.29■■□□□ 1.32
TARDBP-225ENST00000621715 FLAD1Q8NFF5 587 aa23.29■■□□□ 1.32
TARDBP-225ENST00000621715 SMARCC1Q92922 1105 aaPredicted RBP23.29■■□□□ 1.32
TARDBP-225ENST00000621715 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
TARDBP-225ENST00000621715 ADCY9O60503 1353 aa23.27■■□□□ 1.31
TARDBP-225ENST00000621715 PHKG2P15735 406 aa23.26■■□□□ 1.31
TARDBP-225ENST00000621715 SPG7Q9UQ90 795 aa23.26■■□□□ 1.31
TARDBP-225ENST00000621715 IGSF1Q8N6C5 1336 aa23.25■■□□□ 1.31
TARDBP-225ENST00000621715 EIF4A2Q14240 407 aaKnown RBP23.24■■□□□ 1.31
TARDBP-225ENST00000621715 ATG3Q9NT62 314 aa23.24■■□□□ 1.31
TARDBP-225ENST00000621715 KIAA1551Q9HCM1 1747 aa23.24■■□□□ 1.31
TARDBP-225ENST00000621715 TNNT2P45379 298 aaPredicted RBP23.23■■□□□ 1.31
TARDBP-225ENST00000621715 TRIM26Q12899 539 aaPredicted RBP23.23■■□□□ 1.31
TARDBP-225ENST00000621715 SLC4A9Q96Q91 983 aa23.23■■□□□ 1.31
TARDBP-225ENST00000621715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.23■■□□□ 1.313e-7■■□□□ 13.6
TARDBP-225ENST00000621715 TMOD3Q9NYL9 352 aa23.23■■□□□ 1.31
TARDBP-225ENST00000621715 SSFA2P28290 1259 aa23.22■■□□□ 1.31
TARDBP-225ENST00000621715 KDRP35968 1356 aa23.22■■□□□ 1.31
TARDBP-225ENST00000621715 GNPATO15228 680 aa23.21■■□□□ 1.31
TARDBP-225ENST00000621715 KIF13BQ9NQT8 1826 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms