RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 DPEP1P16444 411 aa3.53□□□□□ -1.84
CPNE3-211ENST00000621526 VEGFBP49765 207 aa3.53□□□□□ -1.84
CPNE3-211ENST00000621526 DEFB115Q30KQ5 88 aa3.53□□□□□ -1.84
CPNE3-211ENST00000621526 DALRD3Q5D0E6 543 aaKnown RBP3.53□□□□□ -1.84
CPNE3-211ENST00000621526 CHADLQ6NUI6 762 aa3.53□□□□□ -1.84
CPNE3-211ENST00000621526 SMARCC1Q92922 1105 aaPredicted RBP3.53□□□□□ -1.84
CPNE3-211ENST00000621526 SYTL4Q96C24 671 aaPredicted RBP3.53□□□□□ -1.84
CPNE3-211ENST00000621526 DCAF5Q96JK2 942 aa3.53□□□□□ -1.84
CPNE3-211ENST00000621526 NLRP2Q9NX02 1062 aa3.53□□□□□ -1.84
CPNE3-211ENST00000621526 RNF181Q9P0P0 153 aa3.53□□□□□ -1.84
CPNE3-211ENST00000621526 ANKRD36BQ8N2N9 1353 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.52□□□□□ -1.85
CPNE3-211ENST00000621526 RASSF10A6NK89 507 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 CA12O43570 354 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 ITGBL1O95965 494 aaPredicted RBP3.52□□□□□ -1.85
CPNE3-211ENST00000621526 MMP10P09238 476 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 LMNB1P20700 586 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 ITGAEP38570 1179 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 TMF1P82094 1093 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 ZCRB1Q8TBF4 217 aaKnown RBP3.52□□□□□ -1.85
CPNE3-211ENST00000621526 MPHOSPH9Q99550 1183 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 BEGAINQ9BUH8 593 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 CCDC87Q9NVE4 849 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 CABP1Q9NZU7 370 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 PARP4Q9UKK3 1724 aaKnown RBP3.52□□□□□ -1.85
CPNE3-211ENST00000621526 ALS2Q96Q42 1657 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 PPIP5K1Q6PFW1 1433 aa3.52□□□□□ -1.85
CPNE3-211ENST00000621526 USP47Q96K76 1375 aa3.51□□□□□ -1.85
CPNE3-211ENST00000621526 ERBB3P21860 1342 aa3.51□□□□□ -1.85
CPNE3-211ENST00000621526 PASKQ96RG2 1323 aa3.51□□□□□ -1.85
CPNE3-211ENST00000621526 TRPM3Q9HCF6 1732 aaPredicted RBP3.51□□□□□ -1.85
CPNE3-211ENST00000621526 LOC105371045A0A1W2PR82 267 aa3.51□□□□□ -1.85
CPNE3-211ENST00000621526 MAP2K2P36507 400 aa3.51□□□□□ -1.85
CPNE3-211ENST00000621526 TRAPPC3LQ5T215 181 aa3.51□□□□□ -1.85
CPNE3-211ENST00000621526 AK7Q96M32 723 aa3.51□□□□□ -1.85
CPNE3-211ENST00000621526 COL24A1Q17RW2 1714 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 CGNL1Q0VF96 1302 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 TTC21AQ8NDW8 1320 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 WDR33Q9C0J8 1336 aaKnown RBP3.5□□□□□ -1.85
CPNE3-211ENST00000621526 LMO7Q8WWI1 1683 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 ADRA2BP18089 450 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 ECE1P42892 770 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 SRPK2P78362 688 aaKnown RBP3.5□□□□□ -1.85
CPNE3-211ENST00000621526 RC3H1Q5TC82 1133 aaKnown RBP3.5□□□□□ -1.85
CPNE3-211ENST00000621526 LDHDQ86WU2 507 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 ANKRD24Q8TF21 1146 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 MCOLN1Q9GZU1 580 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 PARP3Q9Y6F1 533 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 PAPPAQ13219 1627 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 NSD3Q9BZ95 1437 aa3.5□□□□□ -1.85
CPNE3-211ENST00000621526 ARHGEF28Q8N1W1 1705 aaKnown RBP3.5□□□□□ -1.85
CPNE3-211ENST00000621526 TTC21BQ7Z4L5 1316 aa3.49□□□□□ -1.85
CPNE3-211ENST00000621526 IQCA1LA6NCM1 817 aa3.49□□□□□ -1.85
CPNE3-211ENST00000621526 DLL1O00548 723 aa3.49□□□□□ -1.85
CPNE3-211ENST00000621526 HABP4Q5JVS0 413 aaKnown RBP3.49□□□□□ -1.85
CPNE3-211ENST00000621526 SMIM5Q71RC9 77 aa3.49□□□□□ -1.85
CPNE3-211ENST00000621526 AMIGO3Q86WK7 504 aa3.49□□□□□ -1.85
CPNE3-211ENST00000621526 IP6K1Q92551 441 aa3.49□□□□□ -1.85
CPNE3-211ENST00000621526 GPR101Q96P66 508 aaPredicted RBP3.49□□□□□ -1.85
CPNE3-211ENST00000621526 RTCBQ9Y3I0 505 aaKnown RBP3.49□□□□□ -1.85
CPNE3-211ENST00000621526 CPSF1Q10570 1443 aaKnown RBP3.49□□□□□ -1.85
CPNE3-211ENST00000621526 WDR90Q96KV7 1748 aa3.49□□□□□ -1.85
CPNE3-211ENST00000621526 ABCA3Q99758 1704 aa3.49□□□□□ -1.85
CPNE3-211ENST00000621526 NSD2O96028 1365 aa3.49□□□□□ -1.85
CPNE3-211ENST00000621526 KCPQ6ZWJ8 1503 aa3.49□□□□□ -1.85
CPNE3-211ENST00000621526 LRRC37A3O60309 1634 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 CICQ96RK0 1608 aaPredicted RBP3.48□□□□□ -1.85
CPNE3-211ENST00000621526 KDM6AO15550 1401 aaPredicted RBP3.48□□□□□ -1.85
CPNE3-211ENST00000621526 LOC102724428A0A0B4J2F2 783 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 RPS6KA4O75676 772 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 GYS1P13807 737 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 SIK1P57059 783 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 NKX1-1Q15270 411 aaPredicted RBP3.48□□□□□ -1.85
CPNE3-211ENST00000621526 MPRIPQ6WCQ1 1025 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 PNMA8AQ86V59 439 aaPredicted RBP3.48□□□□□ -1.85
CPNE3-211ENST00000621526 NBPF15Q8N660 670 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 DCAF11Q8TEB1 546 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 ARHGEF1Q92888 912 aaKnown RBP3.48□□□□□ -1.85
CPNE3-211ENST00000621526 L3MBTL3Q96JM7 780 aaPredicted RBP3.48□□□□□ -1.85
CPNE3-211ENST00000621526 CFAP44Q96MT7 982 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 CABP2Q9NPB3 220 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 KDM2AQ9Y2K7 1162 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 SBF2Q86WG5 1849 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 USP31Q70CQ4 1352 aa3.48□□□□□ -1.85
CPNE3-211ENST00000621526 A0A0C4DFX4 3053 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 PHF14O94880 888 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 TM4SF1P30408 202 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 RFC4P35249 363 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 DGKZQ13574 1117 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 NBPF1Q3BBV0 1214 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 CNTROBQ8N137 903 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 TTLL6Q8N841 843 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 PIGBQ92521 554 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 HHIPL1Q96JK4 782 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 TAF1DQ9H5J8 278 aaPredicted RBP3.47□□□□□ -1.85
CPNE3-211ENST00000621526 PDZRN3Q9UPQ7 1066 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 PALLDQ8WX93 1383 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 KNDC1Q76NI1 1749 aa3.47□□□□□ -1.85
CPNE3-211ENST00000621526 MAP3K19Q56UN5 1328 aa3.46□□□□□ -1.85
CPNE3-211ENST00000621526 SLIT3O75094 1523 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms