RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 SLC15A2Q16348 729 aa22.17■■□□□ 1.14
CD40-207ENST00000620709 HSP90AB2PQ58FF8 381 aa22.17■■□□□ 1.14
CD40-207ENST00000620709 MEGF6O75095 1541 aa22.16■■□□□ 1.14
CD40-207ENST00000620709 RAPGEF4Q8WZA2 1011 aa22.16■■□□□ 1.14
CD40-207ENST00000620709 ATF5Q9Y2D1 282 aaPredicted RBP22.16■■□□□ 1.14
CD40-207ENST00000620709 PRIM1P49642 420 aaKnown RBP22.15■■□□□ 1.14
CD40-207ENST00000620709 CASZ1Q86V15 1759 aa22.14■■□□□ 1.14
CD40-207ENST00000620709 EIF4G2P78344 907 aaKnown RBP eCLIP22.14■■□□□ 1.13
CD40-207ENST00000620709 EMILIN1Q9Y6C2 1016 aa22.14■■□□□ 1.13
CD40-207ENST00000620709 FLT4P35916 1363 aa22.13■■□□□ 1.13
CD40-207ENST00000620709 TATP17735 454 aaPredicted RBP22.13■■□□□ 1.13
CD40-207ENST00000620709 INSRP06213 1382 aa22.13■■□□□ 1.13
CD40-207ENST00000620709 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
CD40-207ENST00000620709 CGNL1Q0VF96 1302 aa22.12■■□□□ 1.13
CD40-207ENST00000620709 DOT1LQ8TEK3 1739 aa22.11■■□□□ 1.13
CD40-207ENST00000620709 SHANK3Q9BYB0 1731 aa22.1■■□□□ 1.13
CD40-207ENST00000620709 LRRC4BQ9NT99 713 aa22.1■■□□□ 1.13
CD40-207ENST00000620709 TNNT2P45379 298 aaPredicted RBP22.09■■□□□ 1.13
CD40-207ENST00000620709 KCNQ4P56696 695 aa22.09■■□□□ 1.13
CD40-207ENST00000620709 ZNF827Q17R98 1081 aa22.08■■□□□ 1.13
CD40-207ENST00000620709 KIF24Q5T7B8 1368 aa22.08■■□□□ 1.13
CD40-207ENST00000620709 DCAF8L1A6NGE4 600 aa22.07■■□□□ 1.12
CD40-207ENST00000620709 SLC27A3Q5K4L6 730 aa22.06■■□□□ 1.12
CD40-207ENST00000620709 DIEXFQ68CQ4 756 aaKnown RBP22.06■■□□□ 1.12
CD40-207ENST00000620709 PAPPAQ13219 1627 aa22.05■■□□□ 1.12
CD40-207ENST00000620709 MTFR1LQ9H019 292 aa22.05■■□□□ 1.12
CD40-207ENST00000620709 MAP2P11137 1827 aaKnown RBP22.04■■□□□ 1.12
CD40-207ENST00000620709 PCDH11XQ9BZA7 1347 aa22.04■■□□□ 1.12
CD40-207ENST00000620709 PCDH11YQ9BZA8 1340 aa22.04■■□□□ 1.12
CD40-207ENST00000620709 PTGER2P43116 358 aa22.04■■□□□ 1.12
CD40-207ENST00000620709 PANK3Q9H999 370 aa22.04■■□□□ 1.12
CD40-207ENST00000620709 NSD2O96028 1365 aa22.03■■□□□ 1.12
CD40-207ENST00000620709 TFCP2L1Q9NZI6 479 aa22.02■■□□□ 1.12
CD40-207ENST00000620709 POLKQ9UBT6 870 aa22.01■■□□□ 1.11
CD40-207ENST00000620709 CCNL1Q9UK58 526 aaPredicted RBP22.01■■□□□ 1.11
CD40-207ENST00000620709 WASHC2AQ641Q2 1341 aa22.01■■□□□ 1.11
CD40-207ENST00000620709 AKT1S1Q96B36 256 aa22.01■■□□□ 1.11
CD40-207ENST00000620709 MPRIPQ6WCQ1 1025 aa22■■□□□ 1.11
CD40-207ENST00000620709 CYP27B1O15528 508 aa21.99■■□□□ 1.11
CD40-207ENST00000620709 EYA1Q99502 592 aa21.99■■□□□ 1.11
CD40-207ENST00000620709 FHDC1Q9C0D6 1143 aaPredicted RBP21.99■■□□□ 1.11
CD40-207ENST00000620709 LY75O60449 1722 aa21.98■■□□□ 1.11
CD40-207ENST00000620709 ANKRD26Q9UPS8 1709 aa21.98■■□□□ 1.11
CD40-207ENST00000620709 MSH5O43196 834 aa21.97■■□□□ 1.11
CD40-207ENST00000620709 SPG7Q9UQ90 795 aa21.97■■□□□ 1.11
CD40-207ENST00000620709 KLHL34Q8N239 644 aa21.96■■□□□ 1.11
CD40-207ENST00000620709 ARXQ96QS3 562 aa21.96■■□□□ 1.11
CD40-207ENST00000620709 PNPLA7Q6ZV29 1317 aa21.96■■□□□ 1.11
CD40-207ENST00000620709 YY1P25490 414 aa21.96■■□□□ 1.11
CD40-207ENST00000620709 EIF4A2Q14240 407 aaKnown RBP21.95■■□□□ 1.1
CD40-207ENST00000620709 SYT17Q9BSW7 474 aa21.95■■□□□ 1.1
CD40-207ENST00000620709 MORC1Q86VD1 984 aa21.94■■□□□ 1.1
CD40-207ENST00000620709 SGIP1Q9BQI5 828 aa21.94■■□□□ 1.1
CD40-207ENST00000620709 TUBGCP6Q96RT7 1819 aa21.93■■□□□ 1.1
CD40-207ENST00000620709 PKD1L3Q7Z443 1732 aa21.93■■□□□ 1.1
CD40-207ENST00000620709 POLD1P28340 1107 aa21.92■■□□□ 1.1
CD40-207ENST00000620709 PALLDQ8WX93 1383 aa21.92■■□□□ 1.1
CD40-207ENST00000620709 SLC16A10Q8TF71 515 aa21.91■■□□□ 1.1
CD40-207ENST00000620709 KNSTRNQ9Y448 316 aa21.91■■□□□ 1.1
CD40-207ENST00000620709 QSER1Q2KHR3 1735 aa21.91■■□□□ 1.1
CD40-207ENST00000620709 NCAPD2Q15021 1401 aa21.91■■□□□ 1.1
CD40-207ENST00000620709 ITGB4P16144 1822 aa21.91■■□□□ 1.1
CD40-207ENST00000620709 TOGARAM1Q9Y4F4 1720 aa21.91■■□□□ 1.1
CD40-207ENST00000620709 PIGBQ92521 554 aa21.89■■□□□ 1.09
CD40-207ENST00000620709 SMARCC1Q92922 1105 aaPredicted RBP21.89■■□□□ 1.09
CD40-207ENST00000620709 IFNL2Q8IZJ0 200 aa21.88■■□□□ 1.09
CD40-207ENST00000620709 C5P01031 1676 aa21.87■■□□□ 1.09
CD40-207ENST00000620709 COL23A1Q86Y22 540 aaPredicted RBP21.87■■□□□ 1.09
CD40-207ENST00000620709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.87■■□□□ 1.09
CD40-207ENST00000620709 TMOD3Q9NYL9 352 aa21.87■■□□□ 1.09
CD40-207ENST00000620709 PHKG2P15735 406 aa21.86■■□□□ 1.09
CD40-207ENST00000620709 NKX1-1Q15270 411 aaPredicted RBP21.86■■□□□ 1.09
CD40-207ENST00000620709 MSL1Q68DK7 614 aa21.85■■□□□ 1.09
CD40-207ENST00000620709 AK7Q96M32 723 aa21.85■■□□□ 1.09
CD40-207ENST00000620709 KIF7Q2M1P5 1343 aa21.84■■□□□ 1.09
CD40-207ENST00000620709 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
CD40-207ENST00000620709 IGSF1Q8N6C5 1336 aa21.83■■□□□ 1.09
CD40-207ENST00000620709 HMGB2P26583 209 aaKnown RBP21.83■■□□□ 1.09
CD40-207ENST00000620709 DDX10Q13206 875 aaKnown RBP21.83■■□□□ 1.09
CD40-207ENST00000620709 TAF1LQ8IZX4 1826 aa21.82■■□□□ 1.08
CD40-207ENST00000620709 PHF14O94880 888 aa21.82■■□□□ 1.08
CD40-207ENST00000620709 PLEKHO1Q53GL0 409 aaPredicted RBP21.82■■□□□ 1.08
CD40-207ENST00000620709 ASAP1Q9ULH1 1129 aa21.82■■□□□ 1.08
CD40-207ENST00000620709 CNGB1Q14028 1251 aaPredicted RBP21.81■■□□□ 1.08
CD40-207ENST00000620709 UTRNP46939 3433 aa21.81■■□□□ 1.08
CD40-207ENST00000620709 LOC102724428A0A0B4J2F2 783 aa21.8■■□□□ 1.08
CD40-207ENST00000620709 SIK1P57059 783 aa21.8■■□□□ 1.08
CD40-207ENST00000620709 GPR162Q16538 588 aa21.8■■□□□ 1.08
CD40-207ENST00000620709 AEBP1Q8IUX7 1158 aa21.8■■□□□ 1.08
CD40-207ENST00000620709 ZNF530Q6P9A1 599 aaPredicted RBP21.8■■□□□ 1.08
CD40-207ENST00000620709 SMIM5Q71RC9 77 aa21.8■■□□□ 1.08
CD40-207ENST00000620709 FLAD1Q8NFF5 587 aa21.8■■□□□ 1.08
CD40-207ENST00000620709 C4BP0C0L5 1744 aa21.8■■□□□ 1.08
CD40-207ENST00000620709 MAP3K5Q99683 1374 aa21.79■■□□□ 1.08
CD40-207ENST00000620709 ATP6V1AP38606 617 aa21.78■■□□□ 1.08
CD40-207ENST00000620709 SULT6B1Q6IMI4 303 aa21.78■■□□□ 1.08
CD40-207ENST00000620709 AMER1Q5JTC6 1135 aaPredicted RBP21.77■■□□□ 1.08
CD40-207ENST00000620709 CC2D1BQ5T0F9 858 aaKnown RBP21.77■■□□□ 1.08
CD40-207ENST00000620709 LINC00116Q8NCU8 138 aa21.77■■□□□ 1.08
CD40-207ENST00000620709 NLGN2Q8NFZ4 835 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms