RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 GNAT3A8MTJ3 354 aa21.44■■□□□ 1.02
PCGF3-213ENST00000620529 MCM10Q7L590 875 aa21.44■■□□□ 1.02
PCGF3-213ENST00000620529 MAP3K5Q99683 1374 aa21.44■■□□□ 1.02
PCGF3-213ENST00000620529 AMOTQ4VCS5 1084 aa21.43■■□□□ 1.02
PCGF3-213ENST00000620529 PLEKHO1Q53GL0 409 aaPredicted RBP21.43■■□□□ 1.02
PCGF3-213ENST00000620529 CFAP44Q96MT7 982 aa21.43■■□□□ 1.02
PCGF3-213ENST00000620529 EXOSC9Q06265 439 aaKnown RBP21.43■■□□□ 1.02
PCGF3-213ENST00000620529 ZNF853P0CG23 659 aa21.41■■□□□ 1.02
PCGF3-213ENST00000620529 RAPGEF4Q8WZA2 1011 aa21.41■■□□□ 1.02
PCGF3-213ENST00000620529 MBIPQ9NS73 344 aa21.4■■□□□ 1.02
PCGF3-213ENST00000620529 COL5A2P05997 1499 aaPredicted RBP21.4■■□□□ 1.02
PCGF3-213ENST00000620529 LRRC37A3O60309 1634 aa21.39■■□□□ 1.02
PCGF3-213ENST00000620529 PLIN1O60240 522 aa21.39■■□□□ 1.02
PCGF3-213ENST00000620529 WDR17Q8IZU2 1322 aa21.39■■□□□ 1.01
PCGF3-213ENST00000620529 COL14A1Q05707 1796 aaKnown RBP21.39■■□□□ 1.01
PCGF3-213ENST00000620529 TATP17735 454 aaPredicted RBP21.39■■□□□ 1.01
PCGF3-213ENST00000620529 ZNF530Q6P9A1 599 aaPredicted RBP21.39■■□□□ 1.01
PCGF3-213ENST00000620529 BCAR3O75815 825 aa21.38■■□□□ 1.01
PCGF3-213ENST00000620529 RARSP54136 660 aaKnown RBP21.38■■□□□ 1.01
PCGF3-213ENST00000620529 VIRMAQ69YN4 1812 aaKnown RBP21.38■■□□□ 1.01
PCGF3-213ENST00000620529 CRB1P82279 1406 aa21.37■■□□□ 1.01
PCGF3-213ENST00000620529 C1orf141Q5JVX7 400 aa21.37■■□□□ 1.01
PCGF3-213ENST00000620529 TOM1L2Q6ZVM7 507 aa21.37■■□□□ 1.01
PCGF3-213ENST00000620529 CERKQ8TCT0 537 aa21.37■■□□□ 1.01
PCGF3-213ENST00000620529 EVA1CP58658 441 aa21.37■■□□□ 1.01
PCGF3-213ENST00000620529 AKAP4Q5JQC9 854 aa21.37■■□□□ 1.01
PCGF3-213ENST00000620529 PLEKHG2Q9H7P9 1386 aa21.36■■□□□ 1.01
PCGF3-213ENST00000620529 CANXP27824 592 aaKnown RBP21.35■■□□□ 1.01
PCGF3-213ENST00000620529 PARP4Q9UKK3 1724 aaKnown RBP21.35■■□□□ 1.01
PCGF3-213ENST00000620529 CHL1O00533 1208 aa21.35■■□□□ 1.01
PCGF3-213ENST00000620529 STRN4Q9NRL3 753 aa21.35■■□□□ 1.01
PCGF3-213ENST00000620529 PPP4R2Q9NY27 417 aa21.35■■□□□ 1.01
PCGF3-213ENST00000620529 ZNF428Q96B54 188 aa21.34■■□□□ 1.01
PCGF3-213ENST00000620529 SPG7Q9UQ90 795 aa21.33■■□□□ 1.01
PCGF3-213ENST00000620529 MEGF6O75095 1541 aa21.33■■□□□ 1.01
PCGF3-213ENST00000620529 IL17REQ8NFR9 667 aa21.32■■□□□ 1
PCGF3-213ENST00000620529 TSPYL4Q9UJ04 414 aa21.32■■□□□ 1
PCGF3-213ENST00000620529 PKD1L3Q7Z443 1732 aa21.32■■□□□ 1
PCGF3-213ENST00000620529 BCL2L13Q9BXK5 485 aa21.32■■□□□ 1
PCGF3-213ENST00000620529 SMC4Q9NTJ3 1288 aa21.32■■□□□ 1
PCGF3-213ENST00000620529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.32■■□□□ 1
PCGF3-213ENST00000620529 BTG4Q9NY30 223 aa21.31■■□□□ 1
PCGF3-213ENST00000620529 TWISTNBQ3B726 338 aaPredicted RBP21.3■■□□□ 1
PCGF3-213ENST00000620529 FRAT1Q92837 279 aaPredicted RBP21.3■■□□□ 1
PCGF3-213ENST00000620529 CARD10Q9BWT7 1032 aa21.3■■□□□ 1
PCGF3-213ENST00000620529 CEMIPQ8WUJ3 1361 aa21.3■■□□□ 1
PCGF3-213ENST00000620529 ALDH1L2Q3SY69 923 aa21.3■■□□□ 1
PCGF3-213ENST00000620529 TAF7Q15545 349 aaPredicted RBP21.29■■□□□ 1
PCGF3-213ENST00000620529 LARP1Q6PKG0 1096 aaKnown RBP21.29■■□□□ 1
PCGF3-213ENST00000620529 BABAM1Q9NWV8 329 aa21.29■■□□□ 1
PCGF3-213ENST00000620529 PLCH1Q4KWH8 1693 aa21.29■■□□□ 1
PCGF3-213ENST00000620529 OVOS2A0A0G2JMS6 1433 aa21.29■■□□□ 1
PCGF3-213ENST00000620529 ELL2O00472 640 aaPredicted RBP21.28■■□□□ 1
PCGF3-213ENST00000620529 VAMP4O75379 141 aa21.28■■□□□ 1
PCGF3-213ENST00000620529 TEFQ10587 303 aa21.28■■□□□ 1
PCGF3-213ENST00000620529 TSPYL6Q8N831 410 aa21.28■■□□□ 1
PCGF3-213ENST00000620529 EXOC6Q8TAG9 804 aa21.28■■□□□ 1
PCGF3-213ENST00000620529 SSH1Q8WYL5 1049 aa21.28■■□□□ 1
PCGF3-213ENST00000620529 C20orf194Q5TEA3 1177 aa21.27■■□□□ 1
PCGF3-213ENST00000620529 MPRIPQ6WCQ1 1025 aa21.27■■□□□ 1
PCGF3-213ENST00000620529 C8orf58Q8NAV2 365 aa21.27■■□□□ 1
PCGF3-213ENST00000620529 MIS18AQ9NYP9 233 aa21.27■■□□□ 1
PCGF3-213ENST00000620529 NUTM2BA6NNL0 878 aaPredicted RBP21.26■□□□□ 0.99
PCGF3-213ENST00000620529 NUTM2EB1AL46 878 aaPredicted RBP21.26■□□□□ 0.99
PCGF3-213ENST00000620529 RNMTO43148 476 aaKnown RBP21.26■□□□□ 0.99
PCGF3-213ENST00000620529 ADAMTS2O95450 1211 aa21.26■□□□□ 0.99
PCGF3-213ENST00000620529 NUTM2AQ8IVF1 878 aaPredicted RBP21.26■□□□□ 0.99
PCGF3-213ENST00000620529 CRBNQ96SW2 442 aa21.26■□□□□ 0.99
PCGF3-213ENST00000620529 LGR6Q9HBX8 967 aa21.26■□□□□ 0.99
PCGF3-213ENST00000620529 SCN11AQ9UI33 1791 aa21.26■□□□□ 0.99
PCGF3-213ENST00000620529 KIF16BQ96L93 1317 aa21.26■□□□□ 0.99
PCGF3-213ENST00000620529 PDE3AQ14432 1141 aa21.26■□□□□ 0.99
PCGF3-213ENST00000620529 IFNL2Q8IZJ0 200 aa21.26■□□□□ 0.99
PCGF3-213ENST00000620529 IL2RBP14784 551 aa21.25■□□□□ 0.99
PCGF3-213ENST00000620529 JCADQ9P266 1359 aa21.25■□□□□ 0.99
PCGF3-213ENST00000620529 ADAMTS7Q9UKP4 1686 aa21.25■□□□□ 0.99
PCGF3-213ENST00000620529 PHKG2P15735 406 aa21.24■□□□□ 0.99
PCGF3-213ENST00000620529 ZKSCAN2Q63HK3 967 aa21.24■□□□□ 0.99
PCGF3-213ENST00000620529 KDM3BQ7LBC6 1761 aa21.23■□□□□ 0.99
PCGF3-213ENST00000620529 MS4A1P11836 297 aa21.23■□□□□ 0.99
PCGF3-213ENST00000620529 IPO8O15397 1037 aaKnown RBP21.22■□□□□ 0.99
PCGF3-213ENST00000620529 HSP90AB1P08238 724 aaKnown RBP21.22■□□□□ 0.99
PCGF3-213ENST00000620529 USP35Q9P2H5 1018 aa21.22■□□□□ 0.99
PCGF3-213ENST00000620529 NWD2Q9ULI1 1742 aa21.22■□□□□ 0.99
PCGF3-213ENST00000620529 SIPA1L3O60292 1781 aaPredicted RBP21.22■□□□□ 0.99
PCGF3-213ENST00000620529 ZCRB1Q8TBF4 217 aaKnown RBP21.22■□□□□ 0.99
PCGF3-213ENST00000620529 PCDH11XQ9BZA7 1347 aa21.21■□□□□ 0.99
PCGF3-213ENST00000620529 PCDH11YQ9BZA8 1340 aa21.21■□□□□ 0.99
PCGF3-213ENST00000620529 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
PCGF3-213ENST00000620529 BRPF1P55201 1214 aaPredicted RBP21.21■□□□□ 0.99
PCGF3-213ENST00000620529 KRT24Q2M2I5 525 aa21.21■□□□□ 0.99
PCGF3-213ENST00000620529 CCDC136Q96JN2 1154 aa21.21■□□□□ 0.99
PCGF3-213ENST00000620529 B4GALNT3Q6L9W6 998 aa21.2■□□□□ 0.98
PCGF3-213ENST00000620529 BTBD11A6QL63 1104 aa21.2■□□□□ 0.98
PCGF3-213ENST00000620529 FTSJ3Q8IY81 847 aaKnown RBP21.2■□□□□ 0.98
PCGF3-213ENST00000620529 NOB1Q9ULX3 412 aaKnown RBP21.2■□□□□ 0.98
PCGF3-213ENST00000620529 CYP27B1O15528 508 aa21.19■□□□□ 0.98
PCGF3-213ENST00000620529 DCAF5Q96JK2 942 aa21.19■□□□□ 0.98
PCGF3-213ENST00000620529 SOS1Q07889 1333 aaPredicted RBP21.19■□□□□ 0.98
PCGF3-213ENST00000620529 MRPL50Q8N5N7 158 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms