RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 C1QTNF8P60827 252 aa30.88■■■□□ 2.53
SRRT-218ENST00000620394 GPR162Q16538 588 aa30.88■■■□□ 2.53
SRRT-218ENST00000620394 KIF20BQ96Q89 1820 aa30.88■■■□□ 2.53
SRRT-218ENST00000620394 PNPLA7Q6ZV29 1317 aa30.88■■■□□ 2.53
SRRT-218ENST00000620394 IP6K1Q92551 441 aa30.86■■■□□ 2.53
SRRT-218ENST00000620394 DDX54Q8TDD1 881 aaKnown RBP30.85■■■□□ 2.53
SRRT-218ENST00000620394 COG3Q96JB2 828 aa30.85■■■□□ 2.53
SRRT-218ENST00000620394 KLHL34Q8N239 644 aa30.84■■■□□ 2.53
SRRT-218ENST00000620394 RGPD2P0DJD1 1756 aa30.83■■■□□ 2.53
SRRT-218ENST00000620394 CDCA8Q53HL2 280 aa30.82■■■□□ 2.52
SRRT-218ENST00000620394 TFCP2L1Q9NZI6 479 aa30.82■■■□□ 2.52
SRRT-218ENST00000620394 NSD2O96028 1365 aa30.81■■■□□ 2.52
SRRT-218ENST00000620394 MAP3K19Q56UN5 1328 aa30.81■■■□□ 2.52
SRRT-218ENST00000620394 RTL1A6NKG5 1358 aa30.8■■■□□ 2.52
SRRT-218ENST00000620394 SYTL4Q96C24 671 aaPredicted RBP30.8■■■□□ 2.52
SRRT-218ENST00000620394 LTV1Q96GA3 475 aaPredicted RBP30.79■■■□□ 2.52
SRRT-218ENST00000620394 MEGF6O75095 1541 aa30.78■■■□□ 2.52
SRRT-218ENST00000620394 FYB1O15117 783 aa30.76■■■□□ 2.51
SRRT-218ENST00000620394 GIGYF1O75420 1035 aaPredicted RBP30.76■■■□□ 2.51
SRRT-218ENST00000620394 HOXC9P31274 260 aa30.76■■■□□ 2.51
SRRT-218ENST00000620394 PRIM1P49642 420 aaKnown RBP30.76■■■□□ 2.51
SRRT-218ENST00000620394 PELP1Q8IZL8 1130 aaKnown RBP30.76■■■□□ 2.51
SRRT-218ENST00000620394 C5P01031 1676 aa30.75■■■□□ 2.51
SRRT-218ENST00000620394 PCGF6Q9BYE7 350 aa30.75■■■□□ 2.51
SRRT-218ENST00000620394 KCNQ4P56696 695 aa30.73■■■□□ 2.51
SRRT-218ENST00000620394 NLGN2Q8NFZ4 835 aa30.73■■■□□ 2.51
SRRT-218ENST00000620394 ZCRB1Q8TBF4 217 aaKnown RBP30.72■■■□□ 2.51
SRRT-218ENST00000620394 CCNL1Q9UK58 526 aaPredicted RBP30.72■■■□□ 2.51
SRRT-218ENST00000620394 FBLN1P23142 703 aa30.71■■■□□ 2.51
SRRT-218ENST00000620394 AMPHP49418 695 aa30.71■■■□□ 2.51
SRRT-218ENST00000620394 GGNBP2Q9H3C7 697 aa30.71■■■□□ 2.51
SRRT-218ENST00000620394 ANKRD26Q9UPS8 1709 aa30.7■■■□□ 2.5
SRRT-218ENST00000620394 SMG6Q86US8 1419 aaKnown RBP30.68■■■□□ 2.5
SRRT-218ENST00000620394 CGNL1Q0VF96 1302 aa30.68■■■□□ 2.5
SRRT-218ENST00000620394 KIF24Q5T7B8 1368 aa30.67■■■□□ 2.5
SRRT-218ENST00000620394 NSD3Q9BZ95 1437 aa30.67■■■□□ 2.5
SRRT-218ENST00000620394 GOLGB1Q14789 3259 aaKnown RBP30.67■■■□□ 2.5
SRRT-218ENST00000620394 GRIN3BO60391 1043 aa30.67■■■□□ 2.5
SRRT-218ENST00000620394 TAF1LQ8IZX4 1826 aa30.67■■■□□ 2.5
SRRT-218ENST00000620394 RRS1Q15050 365 aaKnown RBP30.66■■■□□ 2.5
SRRT-218ENST00000620394 CARD14Q9BXL6 1004 aa30.65■■■□□ 2.5
SRRT-218ENST00000620394 MSH5O43196 834 aa30.63■■■□□ 2.49
SRRT-218ENST00000620394 YBX3P16989 372 aaKnown RBP eCLIP30.63■■■□□ 2.494e-11■■□□□ 13.5
SRRT-218ENST00000620394 FLT4P35916 1363 aa30.63■■■□□ 2.49
SRRT-218ENST00000620394 HMGB2P26583 209 aaKnown RBP30.62■■■□□ 2.49
SRRT-218ENST00000620394 COL23A1Q86Y22 540 aaPredicted RBP30.62■■■□□ 2.49
SRRT-218ENST00000620394 INSRP06213 1382 aa30.62■■■□□ 2.49
SRRT-218ENST00000620394 RAPGEF4Q8WZA2 1011 aa30.6■■■□□ 2.49
SRRT-218ENST00000620394 PCDH11XQ9BZA7 1347 aa30.58■■■□□ 2.49
SRRT-218ENST00000620394 PCDH11YQ9BZA8 1340 aa30.58■■■□□ 2.49
SRRT-218ENST00000620394 NBPF6Q5VWK0 638 aa30.58■■■□□ 2.49
SRRT-218ENST00000620394 NBPF4Q96M43 638 aa30.58■■■□□ 2.49
SRRT-218ENST00000620394 TOGARAM1Q9Y4F4 1720 aa30.58■■■□□ 2.49
SRRT-218ENST00000620394 C4BP0C0L5 1744 aa30.57■■■□□ 2.48
SRRT-218ENST00000620394 MSL1Q68DK7 614 aa30.56■■■□□ 2.48
SRRT-218ENST00000620394 ITGB4P16144 1822 aa30.56■■■□□ 2.48
SRRT-218ENST00000620394 PKD1L3Q7Z443 1732 aa30.56■■■□□ 2.48
SRRT-218ENST00000620394 ATP10DQ9P241 1426 aa30.56■■■□□ 2.48
SRRT-218ENST00000620394 PALLDQ8WX93 1383 aa30.55■■■□□ 2.48
SRRT-218ENST00000620394 USHBP1Q8N6Y0 703 aa30.55■■■□□ 2.48
SRRT-218ENST00000620394 FLAD1Q8NFF5 587 aa30.55■■■□□ 2.48
SRRT-218ENST00000620394 TATP17735 454 aaPredicted RBP30.54■■■□□ 2.48
SRRT-218ENST00000620394 CD2APQ9Y5K6 639 aa30.54■■■□□ 2.48
SRRT-218ENST00000620394 NCAPD2Q15021 1401 aa30.54■■■□□ 2.48
SRRT-218ENST00000620394 MAP2P11137 1827 aaKnown RBP30.54■■■□□ 2.48
SRRT-218ENST00000620394 HSP90AB2PQ58FF8 381 aa30.53■■■□□ 2.48
SRRT-218ENST00000620394 UBR3Q6ZT12 1888 aa30.53■■■□□ 2.48
SRRT-218ENST00000620394 EIF4G2P78344 907 aaKnown RBP eCLIP30.51■■■□□ 2.47
SRRT-218ENST00000620394 CCER1Q8TC90 406 aaPredicted RBP30.51■■■□□ 2.47
SRRT-218ENST00000620394 EMILIN1Q9Y6C2 1016 aa30.49■■■□□ 2.47
SRRT-218ENST00000620394 ADCY9O60503 1353 aa30.49■■■□□ 2.47
SRRT-218ENST00000620394 HSPA5P11021 654 aaKnown RBP30.47■■■□□ 2.47
SRRT-218ENST00000620394 MPRIPQ6WCQ1 1025 aa30.45■■■□□ 2.47
SRRT-218ENST00000620394 SMARCC1Q92922 1105 aaPredicted RBP30.45■■■□□ 2.47
SRRT-218ENST00000620394 IFFO2Q5TF58 517 aa30.44■■■□□ 2.46
SRRT-218ENST00000620394 AK7Q96M32 723 aa30.44■■■□□ 2.46
SRRT-218ENST00000620394 GPBP1L1Q9HC44 474 aaPredicted RBP30.44■■■□□ 2.46
SRRT-218ENST00000620394 CYP27B1O15528 508 aa30.42■■■□□ 2.46
SRRT-218ENST00000620394 WASHC2AQ641Q2 1341 aa30.42■■■□□ 2.46
SRRT-218ENST00000620394 POLR3GLQ9BT43 218 aa30.38■■■□□ 2.45
SRRT-218ENST00000620394 IGSF1Q8N6C5 1336 aa30.38■■■□□ 2.45
SRRT-218ENST00000620394 CICQ96RK0 1608 aaPredicted RBP30.37■■■□□ 2.45
SRRT-218ENST00000620394 POLKQ9UBT6 870 aa30.37■■■□□ 2.45
SRRT-218ENST00000620394 CEP350Q5VT06 3117 aa30.37■■■□□ 2.45
SRRT-218ENST00000620394 SSFA2P28290 1259 aa30.36■■■□□ 2.45
SRRT-218ENST00000620394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.35■■■□□ 2.45
SRRT-218ENST00000620394 PHF14O94880 888 aa30.35■■■□□ 2.45
SRRT-218ENST00000620394 AMIGO3Q86WK7 504 aa30.35■■■□□ 2.45
SRRT-218ENST00000620394 PPM1GO15355 546 aaPredicted RBP30.34■■■□□ 2.45
SRRT-218ENST00000620394 PLEKHG2Q9H7P9 1386 aa30.33■■■□□ 2.45
SRRT-218ENST00000620394 NKX1-1Q15270 411 aaPredicted RBP30.33■■■□□ 2.45
SRRT-218ENST00000620394 PIGBQ92521 554 aa30.33■■■□□ 2.45
SRRT-218ENST00000620394 PANK3Q9H999 370 aa30.33■■■□□ 2.45
SRRT-218ENST00000620394 HSPA6P17066 643 aa30.32■■■□□ 2.44
SRRT-218ENST00000620394 KIF13BQ9NQT8 1826 aa30.31■■■□□ 2.44
SRRT-218ENST00000620394 EYA1Q99502 592 aa30.31■■■□□ 2.44
SRRT-218ENST00000620394 SPG7Q9UQ90 795 aa30.31■■■□□ 2.44
SRRT-218ENST00000620394 LOC102724428A0A0B4J2F2 783 aa30.3■■■□□ 2.44
SRRT-218ENST00000620394 SIK1P57059 783 aa30.3■■■□□ 2.44
SRRT-218ENST00000620394 ZNF526Q8TF50 670 aaPredicted RBP30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms