RNA–Protein interactions for RNA: ENST00000620262.1

PCDH18-208, Transcript of protocadherin 18, humanhuman

TSL 4

Gene PCDH18, Length 553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-208ENST00000620262 LHX8Q68G74 356 aa11.87□□□□□ -0.51
PCDH18-208ENST00000620262 MIER1Q8N108 512 aa11.87□□□□□ -0.51
PCDH18-208ENST00000620262 STAC3Q96MF2 364 aa11.87□□□□□ -0.51
PCDH18-208ENST00000620262 CDK19Q9BWU1 502 aa11.87□□□□□ -0.51
PCDH18-208ENST00000620262 GPBP1L1Q9HC44 474 aaPredicted RBP11.87□□□□□ -0.51
PCDH18-208ENST00000620262 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
PCDH18-208ENST00000620262 NLGN2Q8NFZ4 835 aa11.86□□□□□ -0.51
PCDH18-208ENST00000620262 CCDC7Q96M83 1385 aa11.86□□□□□ -0.51
PCDH18-208ENST00000620262 CPSF1Q10570 1443 aaKnown RBP11.86□□□□□ -0.51
PCDH18-208ENST00000620262 EXOC5O00471 708 aa11.85□□□□□ -0.51
PCDH18-208ENST00000620262 LRRC4BQ9NT99 713 aa11.85□□□□□ -0.51
PCDH18-208ENST00000620262 AXIN2Q9Y2T1 843 aa11.85□□□□□ -0.51
PCDH18-208ENST00000620262 USP6P35125 1406 aa11.85□□□□□ -0.51
PCDH18-208ENST00000620262 PNPLA7Q6ZV29 1317 aa11.85□□□□□ -0.51
PCDH18-208ENST00000620262 RGPD5Q99666 1765 aa11.84□□□□□ -0.51
PCDH18-208ENST00000620262 DNAJC5GQ8N7S2 189 aa11.84□□□□□ -0.51
PCDH18-208ENST00000620262 APLP1P51693 650 aa11.83□□□□□ -0.52
PCDH18-208ENST00000620262 SLC27A3Q5K4L6 730 aa11.83□□□□□ -0.52
PCDH18-208ENST00000620262 ARHGEF25Q86VW2 580 aa11.83□□□□□ -0.52
PCDH18-208ENST00000620262 PELP1Q8IZL8 1130 aaKnown RBP11.83□□□□□ -0.52
PCDH18-208ENST00000620262 PIK3C2AO00443 1686 aa11.83□□□□□ -0.52
PCDH18-208ENST00000620262 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
PCDH18-208ENST00000620262 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
PCDH18-208ENST00000620262 PPIP5K1Q6PFW1 1433 aa11.82□□□□□ -0.52
PCDH18-208ENST00000620262 KIF3CO14782 793 aa11.81□□□□□ -0.52
PCDH18-208ENST00000620262 NLRP6P59044 892 aa11.81□□□□□ -0.52
PCDH18-208ENST00000620262 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
PCDH18-208ENST00000620262 PCNTO95613 3336 aa11.8□□□□□ -0.52
PCDH18-208ENST00000620262 LY75O60449 1722 aa11.8□□□□□ -0.52
PCDH18-208ENST00000620262 QRICH2Q9H0J4 1663 aa11.79□□□□□ -0.52
PCDH18-208ENST00000620262 CD2APQ9Y5K6 639 aa11.79□□□□□ -0.52
PCDH18-208ENST00000620262 NFAT5O94916 1531 aa11.79□□□□□ -0.52
PCDH18-208ENST00000620262 KIAA1210Q9ULL0 1709 aa11.78□□□□□ -0.52
PCDH18-208ENST00000620262 PRELPP51888 382 aa11.78□□□□□ -0.52
PCDH18-208ENST00000620262 KCNH5Q8NCM2 988 aa11.78□□□□□ -0.52
PCDH18-208ENST00000620262 ACSBG1Q96GR2 724 aa11.78□□□□□ -0.52
PCDH18-208ENST00000620262 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
PCDH18-208ENST00000620262 JMYQ8N9B5 988 aa11.77□□□□□ -0.53
PCDH18-208ENST00000620262 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.53
PCDH18-208ENST00000620262 ZBTB7CA1YPR0 619 aa11.76□□□□□ -0.53
PCDH18-208ENST00000620262 COL13A1Q5TAT6 717 aaPredicted RBP11.76□□□□□ -0.53
PCDH18-208ENST00000620262 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
PCDH18-208ENST00000620262 WDR90Q96KV7 1748 aa11.76□□□□□ -0.53
PCDH18-208ENST00000620262 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
PCDH18-208ENST00000620262 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
PCDH18-208ENST00000620262 TOMM70O94826 608 aa11.74□□□□□ -0.53
PCDH18-208ENST00000620262 CSB-PGBD3P0DP91 1061 aa11.74□□□□□ -0.53
PCDH18-208ENST00000620262 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
PCDH18-208ENST00000620262 DCAF11Q8TEB1 546 aa11.74□□□□□ -0.53
PCDH18-208ENST00000620262 ERBB3P21860 1342 aa11.74□□□□□ -0.53
PCDH18-208ENST00000620262 USP54Q70EL1 1684 aa11.74□□□□□ -0.53
PCDH18-208ENST00000620262 SLC34A2O95436 690 aa11.73□□□□□ -0.53
PCDH18-208ENST00000620262 IL2RBP14784 551 aa11.73□□□□□ -0.53
PCDH18-208ENST00000620262 ZNF526Q8TF50 670 aaPredicted RBP11.72□□□□□ -0.53
PCDH18-208ENST00000620262 KLRG1Q96E93 195 aa11.72□□□□□ -0.53
PCDH18-208ENST00000620262 KDM2AQ9Y2K7 1162 aa11.72□□□□□ -0.53
PCDH18-208ENST00000620262 NSD2O96028 1365 aa11.71□□□□□ -0.53
PCDH18-208ENST00000620262 TTC21BQ7Z4L5 1316 aa11.71□□□□□ -0.53
PCDH18-208ENST00000620262 TTC21AQ8NDW8 1320 aa11.71□□□□□ -0.53
PCDH18-208ENST00000620262 SRPK2P78362 688 aaKnown RBP11.71□□□□□ -0.53
PCDH18-208ENST00000620262 COL23A1Q86Y22 540 aaPredicted RBP11.71□□□□□ -0.53
PCDH18-208ENST00000620262 CABP1Q9NZU7 370 aa11.71□□□□□ -0.53
PCDH18-208ENST00000620262 ANKRD36BQ8N2N9 1353 aa11.7□□□□□ -0.54
PCDH18-208ENST00000620262 TNS4Q8IZW8 715 aa11.7□□□□□ -0.54
PCDH18-208ENST00000620262 CABP2Q9NPB3 220 aa11.7□□□□□ -0.54
PCDH18-208ENST00000620262 HMGB2P26583 209 aaKnown RBP11.69□□□□□ -0.54
PCDH18-208ENST00000620262 USP31Q70CQ4 1352 aa11.68□□□□□ -0.54
PCDH18-208ENST00000620262 CENPJQ9HC77 1338 aaPredicted RBP11.68□□□□□ -0.54
PCDH18-208ENST00000620262 FLAD1Q8NFF5 587 aa11.68□□□□□ -0.54
PCDH18-208ENST00000620262 RBM46Q8TBY0 533 aaKnown RBP11.68□□□□□ -0.54
PCDH18-208ENST00000620262 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
PCDH18-208ENST00000620262 DOT1LQ8TEK3 1739 aa11.68□□□□□ -0.54
PCDH18-208ENST00000620262 FAM208AQ9UK61 1670 aaKnown RBP11.68□□□□□ -0.54
PCDH18-208ENST00000620262 TAF1LQ8IZX4 1826 aa11.67□□□□□ -0.54
PCDH18-208ENST00000620262 LTN1O94822 1766 aa11.67□□□□□ -0.54
PCDH18-208ENST00000620262 IGSF1Q8N6C5 1336 aa11.67□□□□□ -0.54
PCDH18-208ENST00000620262 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
PCDH18-208ENST00000620262 C5P01031 1676 aa11.67□□□□□ -0.54
PCDH18-208ENST00000620262 KCNQ4P56696 695 aa11.66□□□□□ -0.54
PCDH18-208ENST00000620262 NLRP2Q9NX02 1062 aa11.66□□□□□ -0.54
PCDH18-208ENST00000620262 CCNL1Q9UK58 526 aaPredicted RBP11.66□□□□□ -0.54
PCDH18-208ENST00000620262 C10orf71Q711Q0 1435 aa11.66□□□□□ -0.54
PCDH18-208ENST00000620262 MON2Q7Z3U7 1717 aa11.66□□□□□ -0.54
PCDH18-208ENST00000620262 KIF13BQ9NQT8 1826 aa11.65□□□□□ -0.54
PCDH18-208ENST00000620262 FSTL1Q12841 308 aa11.65□□□□□ -0.54
PCDH18-208ENST00000620262 ASTLQ6HA08 431 aaPredicted RBP11.65□□□□□ -0.54
PCDH18-208ENST00000620262 PRIM1P49642 420 aaKnown RBP11.64□□□□□ -0.55
PCDH18-208ENST00000620262 MSL1Q68DK7 614 aa11.64□□□□□ -0.55
PCDH18-208ENST00000620262 KIAA1551Q9HCM1 1747 aa11.63□□□□□ -0.55
PCDH18-208ENST00000620262 TOGARAM1Q9Y4F4 1720 aa11.63□□□□□ -0.55
PCDH18-208ENST00000620262 ATMINO43313 823 aaPredicted RBP11.63□□□□□ -0.55
PCDH18-208ENST00000620262 NUBP1P53384 320 aa11.63□□□□□ -0.55
PCDH18-208ENST00000620262 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
PCDH18-208ENST00000620262 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
PCDH18-208ENST00000620262 UBR3Q6ZT12 1888 aa11.63□□□□□ -0.55
PCDH18-208ENST00000620262 NBPF1Q3BBV0 1214 aa11.62□□□□□ -0.55
PCDH18-208ENST00000620262 USP47Q96K76 1375 aa11.62□□□□□ -0.55
PCDH18-208ENST00000620262 SOX12O15370 315 aa11.61□□□□□ -0.55
PCDH18-208ENST00000620262 MAP3K13O43283 966 aa11.61□□□□□ -0.55
PCDH18-208ENST00000620262 NMRK2Q9NPI5 230 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms