RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 USP48Q86UV5 1035 aa11.79□□□□□ -0.52
TNFAIP3-210ENST00000620204 USP26Q9BXU7 913 aa11.79□□□□□ -0.52
TNFAIP3-210ENST00000620204 UNC13BO14795 1591 aa11.79□□□□□ -0.52
TNFAIP3-210ENST00000620204 PYCARDQ9ULZ3 195 aa11.79□□□□□ -0.52
TNFAIP3-210ENST00000620204 IQGAP3Q86VI3 1631 aa11.78□□□□□ -0.52
TNFAIP3-210ENST00000620204 CCDC66A2RUB6 948 aa11.78□□□□□ -0.52
TNFAIP3-210ENST00000620204 INO80Q9ULG1 1556 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP3-210ENST00000620204 GSPT1P15170 499 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-210ENST00000620204 TPD52L1Q16890 204 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP3-210ENST00000620204 TAF3Q5VWG9 929 aa11.78□□□□□ -0.52
TNFAIP3-210ENST00000620204 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-210ENST00000620204 ZMYM3Q14202 1370 aa11.78□□□□□ -0.52
TNFAIP3-210ENST00000620204 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.52
TNFAIP3-210ENST00000620204 PRDM15P57071 1507 aaPredicted RBP11.77□□□□□ -0.52
TNFAIP3-210ENST00000620204 CCDC112Q8NEF3 446 aa11.77□□□□□ -0.52
TNFAIP3-210ENST00000620204 CABP2Q9NPB3 220 aa11.77□□□□□ -0.52
TNFAIP3-210ENST00000620204 CFAP74Q9C0B2 1584 aa11.77□□□□□ -0.53
TNFAIP3-210ENST00000620204 HMOX1P09601 288 aa11.77□□□□□ -0.53
TNFAIP3-210ENST00000620204 SDSP20132 328 aa11.77□□□□□ -0.53
TNFAIP3-210ENST00000620204 MCCP23508 829 aa11.77□□□□□ -0.53
TNFAIP3-210ENST00000620204 E9PCH4 1651 aa11.77□□□□□ -0.53
TNFAIP3-210ENST00000620204 SLC4A10Q6U841 1118 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 SLC52A1Q9NWF4 448 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 TNNT1P13805 278 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 CAMK4Q16566 473 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 PLEKHM2Q8IWE5 1019 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 FAM184AQ8NB25 1140 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 CNPY2Q9Y2B0 182 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 CEP152O94986 1710 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 GOLGA6L4A6NEF3 574 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 PTGS1P23219 599 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 ZBTB9Q96C00 473 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 TRIM5Q9C035 493 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 OGFRQ9NZT2 677 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 ABCA6Q8N139 1617 aa11.76□□□□□ -0.53
TNFAIP3-210ENST00000620204 ZFP91Q96JP5 570 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-210ENST00000620204 ERC2O15083 957 aa11.75□□□□□ -0.53
TNFAIP3-210ENST00000620204 FKBP5Q13451 457 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-210ENST00000620204 TRIM34Q9BYJ4 488 aa11.75□□□□□ -0.53
TNFAIP3-210ENST00000620204 DIP2BQ9P265 1576 aa11.75□□□□□ -0.53
TNFAIP3-210ENST00000620204 CLEC17AQ6ZS10 378 aa11.75□□□□□ -0.53
TNFAIP3-210ENST00000620204 TIGD1Q96MW7 591 aa11.75□□□□□ -0.53
TNFAIP3-210ENST00000620204 SLC26A8Q96RN1 970 aa11.75□□□□□ -0.53
TNFAIP3-210ENST00000620204 ZBTB7BO15156 539 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 TTC22Q5TAA0 569 aa11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 IPO4Q8TEX9 1081 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 VPS37CA5D8V6 355 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 CCDC186Q7Z3E2 898 aa11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 PRAM1Q96QH2 718 aa11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 KDM4AO75164 1064 aa11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 CT47B1P0C2W7 299 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 CCDC183Q5T5S1 534 aa11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 CLTCL1P53675 1640 aa11.74□□□□□ -0.53
TNFAIP3-210ENST00000620204 FBLN1P23142 703 aa11.73□□□□□ -0.53
TNFAIP3-210ENST00000620204 LRMPQ12912 555 aa11.73□□□□□ -0.53
TNFAIP3-210ENST00000620204 POLR3AO14802 1390 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP3-210ENST00000620204 SOX12O15370 315 aa11.73□□□□□ -0.53
TNFAIP3-210ENST00000620204 WAPLQ7Z5K2 1190 aa11.73□□□□□ -0.53
TNFAIP3-210ENST00000620204 CYP2E1P05181 493 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP3-210ENST00000620204 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP3-210ENST00000620204 TXNDC2Q86VQ3 553 aa11.73□□□□□ -0.53
TNFAIP3-210ENST00000620204 FEZ1Q99689 392 aa11.73□□□□□ -0.53
TNFAIP3-210ENST00000620204 SIRT2Q8IXJ6 389 aa11.72□□□□□ -0.53
TNFAIP3-210ENST00000620204 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
TNFAIP3-210ENST00000620204 TRMT1Q9NXH9 659 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-210ENST00000620204 GTF2F1P35269 517 aaKnown RBP eCLIP11.72□□□□□ -0.53
TNFAIP3-210ENST00000620204 CKAP2LQ8IYA6 745 aa11.72□□□□□ -0.53
TNFAIP3-210ENST00000620204 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
TNFAIP3-210ENST00000620204 DIP2CQ9Y2E4 1556 aa11.71□□□□□ -0.53
TNFAIP3-210ENST00000620204 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
TNFAIP3-210ENST00000620204 VIRMAQ69YN4 1812 aaKnown RBP11.71□□□□□ -0.54
TNFAIP3-210ENST00000620204 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.54
TNFAIP3-210ENST00000620204 TET3O43151 1660 aa11.71□□□□□ -0.54
TNFAIP3-210ENST00000620204 UVSSAQ2YD98 709 aa11.71□□□□□ -0.54
TNFAIP3-210ENST00000620204 KIAA1524Q8TCG1 905 aa11.71□□□□□ -0.54
TNFAIP3-210ENST00000620204 TRPM2O94759 1503 aa11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 POLR3GO15318 223 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 DIAPH1O60610 1272 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 GORABQ5T7V8 394 aa11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 KRT222Q8N1A0 295 aa11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 DDX54Q8TDD1 881 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 ABCC3O15438 1527 aa11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 NCBP1Q09161 790 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 FERMT3Q86UX7 667 aa11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 TMX1Q9H3N1 280 aa11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 PPRC1Q5VV67 1664 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 FRMPD1Q5SYB0 1578 aa11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 PTPRTO14522 1441 aa11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 MX1P20591 662 aa11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 RBM33Q96EV2 1170 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 EFCAB6Q5THR3 1501 aa11.7□□□□□ -0.54
TNFAIP3-210ENST00000620204 PPIP5K1Q6PFW1 1433 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 BRD1O95696 1058 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 MAP4K4O95819 1239 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 LUZP1Q86V48 1076 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 C14orf93Q9H972 538 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms