RNA–Protein interactions for RNA: ENST00000619923.1

SLC46A1-209, Transcript of solute carrier family 46 member 1, humanhuman

Gene SLC46A1, Length 528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-209ENST00000619923 FBLN1P23142 703 aa11.26□□□□□ -0.61
SLC46A1-209ENST00000619923 TESK2Q96S53 571 aa11.26□□□□□ -0.61
SLC46A1-209ENST00000619923 MAP3K19Q56UN5 1328 aa11.26□□□□□ -0.61
SLC46A1-209ENST00000619923 KIF13BQ9NQT8 1826 aa11.25□□□□□ -0.61
SLC46A1-209ENST00000619923 NLGN2Q8NFZ4 835 aa11.25□□□□□ -0.61
SLC46A1-209ENST00000619923 IP6K1Q92551 441 aa11.25□□□□□ -0.61
SLC46A1-209ENST00000619923 BRCA1P38398 1863 aaKnown RBP11.24□□□□□ -0.61
SLC46A1-209ENST00000619923 CARD11Q9BXL7 1154 aa11.24□□□□□ -0.61
SLC46A1-209ENST00000619923 HOXC9P31274 260 aa11.23□□□□□ -0.61
SLC46A1-209ENST00000619923 TMC1Q8TDI8 760 aa11.23□□□□□ -0.61
SLC46A1-209ENST00000619923 RTL1A6NKG5 1358 aa11.23□□□□□ -0.61
SLC46A1-209ENST00000619923 NCAPD2Q15021 1401 aa11.23□□□□□ -0.61
SLC46A1-209ENST00000619923 COL5A3P25940 1745 aaPredicted RBP11.23□□□□□ -0.61
SLC46A1-209ENST00000619923 DCAF8L1A6NGE4 600 aa11.22□□□□□ -0.61
SLC46A1-209ENST00000619923 LTV1Q96GA3 475 aaPredicted RBP11.22□□□□□ -0.61
SLC46A1-209ENST00000619923 VIRMAQ69YN4 1812 aaKnown RBP11.21□□□□□ -0.61
SLC46A1-209ENST00000619923 C4AP0C0L4 1744 aa11.21□□□□□ -0.61
SLC46A1-209ENST00000619923 CICQ96RK0 1608 aaPredicted RBP11.21□□□□□ -0.61
SLC46A1-209ENST00000619923 YBX3P16989 372 aaKnown RBP eCLIP11.21□□□□□ -0.61
SLC46A1-209ENST00000619923 SLC27A3Q5K4L6 730 aa11.21□□□□□ -0.61
SLC46A1-209ENST00000619923 HDGFL2Q7Z4V5 671 aaPredicted RBP11.21□□□□□ -0.61
SLC46A1-209ENST00000619923 DDX54Q8TDD1 881 aaKnown RBP11.21□□□□□ -0.61
SLC46A1-209ENST00000619923 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.62
SLC46A1-209ENST00000619923 PRIM1P49642 420 aaKnown RBP11.2□□□□□ -0.62
SLC46A1-209ENST00000619923 C1QTNF8P60827 252 aa11.2□□□□□ -0.62
SLC46A1-209ENST00000619923 AMIGO3Q86WK7 504 aa11.2□□□□□ -0.62
SLC46A1-209ENST00000619923 USHBP1Q8N6Y0 703 aa11.2□□□□□ -0.62
SLC46A1-209ENST00000619923 ADCY9O60503 1353 aa11.19□□□□□ -0.62
SLC46A1-209ENST00000619923 NBPF6Q5VWK0 638 aa11.19□□□□□ -0.62
SLC46A1-209ENST00000619923 NBPF4Q96M43 638 aa11.19□□□□□ -0.62
SLC46A1-209ENST00000619923 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
SLC46A1-209ENST00000619923 ZNF831Q5JPB2 1677 aa11.18□□□□□ -0.62
SLC46A1-209ENST00000619923 MYH14Q7Z406 1995 aaKnown RBP11.18□□□□□ -0.62
SLC46A1-209ENST00000619923 SENP3-EIF4A1A0A087X0R7 540 aa11.18□□□□□ -0.62
SLC46A1-209ENST00000619923 RRS1Q15050 365 aaKnown RBP11.18□□□□□ -0.62
SLC46A1-209ENST00000619923 COL23A1Q86Y22 540 aaPredicted RBP11.18□□□□□ -0.62
SLC46A1-209ENST00000619923 SLC16A10Q8TF71 515 aa11.18□□□□□ -0.62
SLC46A1-209ENST00000619923 TERF2IPQ9NYB0 399 aa11.18□□□□□ -0.62
SLC46A1-209ENST00000619923 ST20-MTHFSA0A0A6YYL1 179 aa11.17□□□□□ -0.62
SLC46A1-209ENST00000619923 KLHL34Q8N239 644 aa11.17□□□□□ -0.62
SLC46A1-209ENST00000619923 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
SLC46A1-209ENST00000619923 GPR162Q16538 588 aa11.16□□□□□ -0.62
SLC46A1-209ENST00000619923 MSL1Q68DK7 614 aa11.16□□□□□ -0.62
SLC46A1-209ENST00000619923 SYTL4Q96C24 671 aaPredicted RBP11.16□□□□□ -0.62
SLC46A1-209ENST00000619923 TFCP2L1Q9NZI6 479 aa11.16□□□□□ -0.62
SLC46A1-209ENST00000619923 CCNL1Q9UK58 526 aaPredicted RBP11.16□□□□□ -0.62
SLC46A1-209ENST00000619923 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
SLC46A1-209ENST00000619923 FYB1O15117 783 aa11.15□□□□□ -0.62
SLC46A1-209ENST00000619923 ZCRB1Q8TBF4 217 aaKnown RBP11.15□□□□□ -0.62
SLC46A1-209ENST00000619923 COG3Q96JB2 828 aa11.15□□□□□ -0.62
SLC46A1-209ENST00000619923 GGNBP2Q9H3C7 697 aa11.15□□□□□ -0.62
SLC46A1-209ENST00000619923 INSRP06213 1382 aa11.15□□□□□ -0.63
SLC46A1-209ENST00000619923 PALLDQ8WX93 1383 aa11.15□□□□□ -0.63
SLC46A1-209ENST00000619923 USP47Q96K76 1375 aa11.15□□□□□ -0.63
SLC46A1-209ENST00000619923 ADAMTS7Q9UKP4 1686 aa11.14□□□□□ -0.63
SLC46A1-209ENST00000619923 ARFGEF1Q9Y6D6 1849 aa11.14□□□□□ -0.63
SLC46A1-209ENST00000619923 CYP27B1O15528 508 aa11.14□□□□□ -0.63
SLC46A1-209ENST00000619923 POLD1P28340 1107 aa11.14□□□□□ -0.63
SLC46A1-209ENST00000619923 SMIM5Q71RC9 77 aa11.14□□□□□ -0.63
SLC46A1-209ENST00000619923 TJP1Q07157 1748 aa11.14□□□□□ -0.63
SLC46A1-209ENST00000619923 FLT4P35916 1363 aa11.14□□□□□ -0.63
SLC46A1-209ENST00000619923 AMPHP49418 695 aa11.13□□□□□ -0.63
SLC46A1-209ENST00000619923 HSP90AB2PQ58FF8 381 aa11.13□□□□□ -0.63
SLC46A1-209ENST00000619923 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
SLC46A1-209ENST00000619923 SMG6Q86US8 1419 aaKnown RBP11.12□□□□□ -0.63
SLC46A1-209ENST00000619923 NSD3Q9BZ95 1437 aa11.12□□□□□ -0.63
SLC46A1-209ENST00000619923 GIGYF1O75420 1035 aaPredicted RBP11.12□□□□□ -0.63
SLC46A1-209ENST00000619923 PCDH11XQ9BZA7 1347 aa11.11□□□□□ -0.63
SLC46A1-209ENST00000619923 PCDH11YQ9BZA8 1340 aa11.11□□□□□ -0.63
SLC46A1-209ENST00000619923 SCN11AQ9UI33 1791 aa11.11□□□□□ -0.63
SLC46A1-209ENST00000619923 SBF1O95248 1867 aa11.11□□□□□ -0.63
SLC46A1-209ENST00000619923 KDRP35968 1356 aa11.11□□□□□ -0.63
SLC46A1-209ENST00000619923 KIF24Q5T7B8 1368 aa11.11□□□□□ -0.63
SLC46A1-209ENST00000619923 CGNL1Q0VF96 1302 aa11.1□□□□□ -0.63
SLC46A1-209ENST00000619923 CARD14Q9BXL6 1004 aa11.1□□□□□ -0.63
SLC46A1-209ENST00000619923 EMILIN1Q9Y6C2 1016 aa11.1□□□□□ -0.63
SLC46A1-209ENST00000619923 PXDNLA1KZ92 1463 aa11.1□□□□□ -0.63
SLC46A1-209ENST00000619923 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
SLC46A1-209ENST00000619923 DLEC1Q9Y238 1755 aa11.08□□□□□ -0.64
SLC46A1-209ENST00000619923 LINC00116Q8NCU8 138 aa11.08□□□□□ -0.64
SLC46A1-209ENST00000619923 WDR90Q96KV7 1748 aa11.08□□□□□ -0.64
SLC46A1-209ENST00000619923 MSH5O43196 834 aa11.07□□□□□ -0.64
SLC46A1-209ENST00000619923 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
SLC46A1-209ENST00000619923 MPRIPQ6WCQ1 1025 aa11.07□□□□□ -0.64
SLC46A1-209ENST00000619923 RAPGEF4Q8WZA2 1011 aa11.07□□□□□ -0.64
SLC46A1-209ENST00000619923 PIGBQ92521 554 aa11.07□□□□□ -0.64
SLC46A1-209ENST00000619923 CD2APQ9Y5K6 639 aa11.07□□□□□ -0.64
SLC46A1-209ENST00000619923 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
SLC46A1-209ENST00000619923 IGSF1Q8N6C5 1336 aa11.07□□□□□ -0.64
SLC46A1-209ENST00000619923 ITPK1Q13572 414 aa11.06□□□□□ -0.64
SLC46A1-209ENST00000619923 NKX1-1Q15270 411 aaPredicted RBP11.06□□□□□ -0.64
SLC46A1-209ENST00000619923 WWC3Q9ULE0 1092 aa11.06□□□□□ -0.64
SLC46A1-209ENST00000619923 KDM6AO15550 1401 aaPredicted RBP11.06□□□□□ -0.64
SLC46A1-209ENST00000619923 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.05□□□□□ -0.64
SLC46A1-209ENST00000619923 GRIN3BO60391 1043 aa11.05□□□□□ -0.64
SLC46A1-209ENST00000619923 CCDC88AQ3V6T2 1871 aa11.05□□□□□ -0.64
SLC46A1-209ENST00000619923 UBR2Q8IWV8 1755 aa11.04□□□□□ -0.64
SLC46A1-209ENST00000619923 PHF14O94880 888 aa11.04□□□□□ -0.64
SLC46A1-209ENST00000619923 TMF1P82094 1093 aa11.04□□□□□ -0.64
SLC46A1-209ENST00000619923 SLC4A9Q96Q91 983 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms