RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 HTATSF1O43719 755 aaKnown RBP12.2□□□□□ -0.46
CDH23-213ENST00000619887 CLTCQ00610 1675 aaKnown RBP12.2□□□□□ -0.46
CDH23-213ENST00000619887 RABEP1Q15276 862 aa12.2□□□□□ -0.46
CDH23-213ENST00000619887 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
CDH23-213ENST00000619887 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
CDH23-213ENST00000619887 HDGFL1Q5TGJ6 251 aa12.19□□□□□ -0.46
CDH23-213ENST00000619887 TSPYL6Q8N831 410 aa12.19□□□□□ -0.46
CDH23-213ENST00000619887 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
CDH23-213ENST00000619887 CHMP3Q9Y3E7 222 aa12.19□□□□□ -0.46
CDH23-213ENST00000619887 GZF1Q9H116 711 aaPredicted RBP12.19□□□□□ -0.46
CDH23-213ENST00000619887 DIP2BQ9P265 1576 aa12.19□□□□□ -0.46
CDH23-213ENST00000619887 DDX58O95786 925 aaKnown RBP12.18□□□□□ -0.46
CDH23-213ENST00000619887 RILPL2Q969X0 211 aa12.18□□□□□ -0.46
CDH23-213ENST00000619887 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
CDH23-213ENST00000619887 RIMBP3CA6NJZ7 1639 aa12.18□□□□□ -0.46
CDH23-213ENST00000619887 RIMBP3BA6NNM3 1639 aa12.18□□□□□ -0.46
CDH23-213ENST00000619887 RIMBP3Q9UFD9 1639 aa12.18□□□□□ -0.46
CDH23-213ENST00000619887 SBNO1A3KN83 1393 aa12.18□□□□□ -0.46
CDH23-213ENST00000619887 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
CDH23-213ENST00000619887 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
CDH23-213ENST00000619887 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
CDH23-213ENST00000619887 KIF24Q5T7B8 1368 aa12.17□□□□□ -0.46
CDH23-213ENST00000619887 NUCB2P80303 420 aa12.17□□□□□ -0.46
CDH23-213ENST00000619887 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
CDH23-213ENST00000619887 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
CDH23-213ENST00000619887 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
CDH23-213ENST00000619887 ZNF530Q6P9A1 599 aaPredicted RBP12.16□□□□□ -0.46
CDH23-213ENST00000619887 SPATA31D1Q6ZQQ2 1576 aa12.16□□□□□ -0.46
CDH23-213ENST00000619887 ARHGEF10O15013 1369 aa12.16□□□□□ -0.46
CDH23-213ENST00000619887 LTKP29376 864 aa12.16□□□□□ -0.46
CDH23-213ENST00000619887 ANKRD44Q8N8A2 993 aa12.16□□□□□ -0.46
CDH23-213ENST00000619887 RAPGEF4Q8WZA2 1011 aa12.16□□□□□ -0.46
CDH23-213ENST00000619887 LRRCC1Q9C099 1032 aa12.16□□□□□ -0.46
CDH23-213ENST00000619887 MIS18AQ9NYP9 233 aa12.16□□□□□ -0.46
CDH23-213ENST00000619887 SOS1Q07889 1333 aaPredicted RBP12.16□□□□□ -0.46
CDH23-213ENST00000619887 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
CDH23-213ENST00000619887 ROBO2Q9HCK4 1378 aa12.15□□□□□ -0.46
CDH23-213ENST00000619887 CHL1O00533 1208 aa12.15□□□□□ -0.46
CDH23-213ENST00000619887 PROSER2Q86WR7 435 aaPredicted RBP12.15□□□□□ -0.46
CDH23-213ENST00000619887 PIK3R4Q99570 1358 aa12.15□□□□□ -0.46
CDH23-213ENST00000619887 K7ELQ4 463 aaPredicted RBP12.15□□□□□ -0.46
CDH23-213ENST00000619887 ATF3P18847 181 aa12.15□□□□□ -0.46
CDH23-213ENST00000619887 NEXNQ0ZGT2 675 aa12.15□□□□□ -0.46
CDH23-213ENST00000619887 REREQ9P2R6 1566 aa12.15□□□□□ -0.46
CDH23-213ENST00000619887 KIAA0232Q92628 1395 aa12.15□□□□□ -0.46
CDH23-213ENST00000619887 RTN4Q9NQC3 1192 aaKnown RBP12.15□□□□□ -0.46
CDH23-213ENST00000619887 SEC24BO95487 1268 aa12.14□□□□□ -0.47
CDH23-213ENST00000619887 RUFY2Q8WXA3 655 aa12.14□□□□□ -0.47
CDH23-213ENST00000619887 CPSF1Q10570 1443 aaKnown RBP12.14□□□□□ -0.47
CDH23-213ENST00000619887 ERC2O15083 957 aa12.14□□□□□ -0.47
CDH23-213ENST00000619887 ABCC4O15439 1325 aa12.14□□□□□ -0.47
CDH23-213ENST00000619887 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
CDH23-213ENST00000619887 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 USP6P35125 1406 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 PRR36Q9H6K5 1346 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 MCM2P49736 904 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 MCM4P33991 863 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 FLIIQ13045 1269 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 DCTPP1Q9H773 170 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 ANO2Q9NQ90 1003 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 LRRC7Q96NW7 1537 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 ZNF853P0CG23 659 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 TBC1D9Q6ZT07 1266 aa12.13□□□□□ -0.47
CDH23-213ENST00000619887 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
CDH23-213ENST00000619887 TTC5Q8N0Z6 440 aa12.12□□□□□ -0.47
CDH23-213ENST00000619887 EYA1Q99502 592 aa12.12□□□□□ -0.47
CDH23-213ENST00000619887 BABAM1Q9NWV8 329 aa12.12□□□□□ -0.47
CDH23-213ENST00000619887 SIGLEC1Q9BZZ2 1709 aa12.12□□□□□ -0.47
CDH23-213ENST00000619887 KCNA6P17658 529 aa12.12□□□□□ -0.47
CDH23-213ENST00000619887 ZRSR1Q15695 479 aaKnown RBP12.12□□□□□ -0.47
CDH23-213ENST00000619887 TTC22Q5TAA0 569 aa12.12□□□□□ -0.47
CDH23-213ENST00000619887 TRAK2O60296 914 aa12.11□□□□□ -0.47
CDH23-213ENST00000619887 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
CDH23-213ENST00000619887 PTMAP06454 111 aaKnown RBP12.11□□□□□ -0.47
CDH23-213ENST00000619887 SYAP1Q96A49 352 aaPredicted RBP12.11□□□□□ -0.47
CDH23-213ENST00000619887 CDC42BPGQ6DT37 1551 aa12.11□□□□□ -0.47
CDH23-213ENST00000619887 NOL8Q76FK4 1167 aaKnown RBP12.11□□□□□ -0.47
CDH23-213ENST00000619887 SNX21Q969T3 373 aa12.11□□□□□ -0.47
CDH23-213ENST00000619887 DDX49Q9Y6V7 483 aaKnown RBP12.11□□□□□ -0.47
CDH23-213ENST00000619887 F6X3S4 739 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
CDH23-213ENST00000619887 IFIT2P09913 472 aaKnown RBP12.1□□□□□ -0.47
CDH23-213ENST00000619887 NLRP2Q9NX02 1062 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 TECPR2O15040 1411 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 CWC22Q9HCG8 908 aaKnown RBP12.1□□□□□ -0.47
CDH23-213ENST00000619887 MAP3K5Q99683 1374 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 HOXC9P31274 260 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 ERC1Q8IUD2 1116 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 MEIS3Q99687 375 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 ISY1Q9ULR0 285 aaKnown RBP12.1□□□□□ -0.47
CDH23-213ENST00000619887 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 RAB11FIP3O75154 756 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 GORABQ5T7V8 394 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 CNTROBQ8N137 903 aa12.1□□□□□ -0.47
CDH23-213ENST00000619887 CLASRPQ8N2M8 674 aaKnown RBP12.1□□□□□ -0.47
CDH23-213ENST00000619887 EVA1CP58658 441 aa12.09□□□□□ -0.47
CDH23-213ENST00000619887 G3BP1Q13283 466 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDH23-213ENST00000619887 COL3A1P02461 1466 aaPredicted RBP12.09□□□□□ -0.47
CDH23-213ENST00000619887 ADGRB2O60241 1585 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms