RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 SETD1BQ9UPS6 1966 aaKnown RBP24.44■■□□□ 1.5
LAPTM4B-204ENST00000619747 HOXC9P31274 260 aa24.44■■□□□ 1.5
LAPTM4B-204ENST00000619747 RTF1Q92541 710 aaKnown RBP24.43■■□□□ 1.5
LAPTM4B-204ENST00000619747 ZNF428Q96B54 188 aa24.42■■□□□ 1.5
LAPTM4B-204ENST00000619747 PIK3C2AO00443 1686 aa24.42■■□□□ 1.5
LAPTM4B-204ENST00000619747 CHL1O00533 1208 aa24.41■■□□□ 1.5
LAPTM4B-204ENST00000619747 ANKARQ7Z5J8 1434 aa24.4■■□□□ 1.5
LAPTM4B-204ENST00000619747 NALCNQ8IZF0 1738 aa24.4■■□□□ 1.5
LAPTM4B-204ENST00000619747 ZBTB7BO15156 539 aaPredicted RBP24.39■■□□□ 1.5
LAPTM4B-204ENST00000619747 TSPYL4Q9UJ04 414 aa24.38■■□□□ 1.49
LAPTM4B-204ENST00000619747 IGSF1Q8N6C5 1336 aa24.38■■□□□ 1.49
LAPTM4B-204ENST00000619747 BRPF1P55201 1214 aaPredicted RBP24.37■■□□□ 1.49
LAPTM4B-204ENST00000619747 ARHGEF10O15013 1369 aa24.37■■□□□ 1.49
LAPTM4B-204ENST00000619747 HDAC1Q13547 482 aaPredicted RBP24.37■■□□□ 1.49
LAPTM4B-204ENST00000619747 PROSER2Q86WR7 435 aaPredicted RBP24.37■■□□□ 1.49
LAPTM4B-204ENST00000619747 NECTIN2Q92692 538 aa24.36■■□□□ 1.49
LAPTM4B-204ENST00000619747 LNPKQ9C0E8 428 aa24.36■■□□□ 1.49
LAPTM4B-204ENST00000619747 NPHP4O75161 1426 aaPredicted RBP24.36■■□□□ 1.49
LAPTM4B-204ENST00000619747 CHD2O14647 1828 aaKnown RBP24.35■■□□□ 1.49
LAPTM4B-204ENST00000619747 FMN2Q9NZ56 1722 aa24.35■■□□□ 1.49
LAPTM4B-204ENST00000619747 ARHGAP45Q92619 1136 aa24.35■■□□□ 1.49
LAPTM4B-204ENST00000619747 RRAGDQ9NQL2 400 aaPredicted RBP24.35■■□□□ 1.49
LAPTM4B-204ENST00000619747 SLC4A2P04920 1241 aa24.33■■□□□ 1.49
LAPTM4B-204ENST00000619747 ADAMTSL3P82987 1691 aa24.33■■□□□ 1.49
LAPTM4B-204ENST00000619747 HSP90AA2PQ14568 343 aaPredicted RBP24.32■■□□□ 1.48
LAPTM4B-204ENST00000619747 GAS2L2Q8NHY3 880 aa24.32■■□□□ 1.48
LAPTM4B-204ENST00000619747 DAXXQ9UER7 740 aaPredicted RBP24.32■■□□□ 1.48
LAPTM4B-204ENST00000619747 KDRP35968 1356 aa24.32■■□□□ 1.48
LAPTM4B-204ENST00000619747 SMC5Q8IY18 1101 aa24.31■■□□□ 1.48
LAPTM4B-204ENST00000619747 LRRC59Q96AG4 307 aaKnown RBP24.31■■□□□ 1.48
LAPTM4B-204ENST00000619747 DDRGK1Q96HY6 314 aa24.31■■□□□ 1.48
LAPTM4B-204ENST00000619747 API5Q9BZZ5 524 aaKnown RBP24.31■■□□□ 1.48
LAPTM4B-204ENST00000619747 CRB1P82279 1406 aa24.31■■□□□ 1.48
LAPTM4B-204ENST00000619747 ABCC4O15439 1325 aa24.31■■□□□ 1.48
LAPTM4B-204ENST00000619747 RGPD1P0DJD0 1748 aa24.31■■□□□ 1.48
LAPTM4B-204ENST00000619747 NBPF6Q5VWK0 638 aa24.3■■□□□ 1.48
LAPTM4B-204ENST00000619747 NBPF4Q96M43 638 aa24.3■■□□□ 1.48
LAPTM4B-204ENST00000619747 ADGRL3Q9HAR2 1447 aa24.3■■□□□ 1.48
LAPTM4B-204ENST00000619747 ANKRD45Q5TZF3 282 aa24.3■■□□□ 1.48
LAPTM4B-204ENST00000619747 USP19O94966 1318 aa24.29■■□□□ 1.48
LAPTM4B-204ENST00000619747 GNAT3A8MTJ3 354 aa24.29■■□□□ 1.48
LAPTM4B-204ENST00000619747 SIRT2Q8IXJ6 389 aa24.29■■□□□ 1.48
LAPTM4B-204ENST00000619747 FRAT2O75474 233 aaPredicted RBP24.29■■□□□ 1.48
LAPTM4B-204ENST00000619747 G2E3Q7L622 706 aa24.29■■□□□ 1.48
LAPTM4B-204ENST00000619747 DDX17Q92841 729 aaKnown RBP24.29■■□□□ 1.48
LAPTM4B-204ENST00000619747 IL17REQ8NFR9 667 aa24.28■■□□□ 1.48
LAPTM4B-204ENST00000619747 F6X3S4 739 aa24.28■■□□□ 1.48
LAPTM4B-204ENST00000619747 SLC4A10Q6U841 1118 aa24.28■■□□□ 1.48
LAPTM4B-204ENST00000619747 IP6K1Q92551 441 aa24.26■■□□□ 1.47
LAPTM4B-204ENST00000619747 NAP1L5Q96NT1 182 aaPredicted RBP24.25■■□□□ 1.47
LAPTM4B-204ENST00000619747 GCP02774 474 aa24.25■■□□□ 1.47
LAPTM4B-204ENST00000619747 HSPA2P54652 639 aa24.25■■□□□ 1.47
LAPTM4B-204ENST00000619747 NUCB1Q02818 461 aa24.24■■□□□ 1.47
LAPTM4B-204ENST00000619747 CHD1LQ86WJ1 897 aa24.24■■□□□ 1.47
LAPTM4B-204ENST00000619747 ZNF142P52746 1687 aaPredicted RBP24.24■■□□□ 1.47
LAPTM4B-204ENST00000619747 MARF1Q9Y4F3 1742 aaKnown RBP24.22■■□□□ 1.47
LAPTM4B-204ENST00000619747 APBB1O00213 710 aa24.22■■□□□ 1.47
LAPTM4B-204ENST00000619747 KRT28Q7Z3Y7 464 aa24.22■■□□□ 1.47
LAPTM4B-204ENST00000619747 KIAA0232Q92628 1395 aa24.22■■□□□ 1.47
LAPTM4B-204ENST00000619747 HAP1P54257 671 aaPredicted RBP24.21■■□□□ 1.47
LAPTM4B-204ENST00000619747 MFAP1P55081 439 aaKnown RBP24.21■■□□□ 1.47
LAPTM4B-204ENST00000619747 ZC3H6P61129 1189 aaKnown RBP24.21■■□□□ 1.47
LAPTM4B-204ENST00000619747 LGR6Q9HBX8 967 aa24.21■■□□□ 1.47
LAPTM4B-204ENST00000619747 MEIS3Q99687 375 aa24.2■■□□□ 1.47
LAPTM4B-204ENST00000619747 CHMP4BQ9H444 224 aaKnown RBP24.2■■□□□ 1.47
LAPTM4B-204ENST00000619747 KCNH5Q8NCM2 988 aa24.2■■□□□ 1.46
LAPTM4B-204ENST00000619747 RRP9O43818 475 aaKnown RBP24.19■■□□□ 1.46
LAPTM4B-204ENST00000619747 UPF2Q9HAU5 1272 aaKnown RBP24.19■■□□□ 1.46
LAPTM4B-204ENST00000619747 HSP90AA1P07900 732 aaKnown RBP24.19■■□□□ 1.46
LAPTM4B-204ENST00000619747 INTS3Q68E01 1043 aaKnown RBP24.19■■□□□ 1.46
LAPTM4B-204ENST00000619747 C19orf44Q9H6X5 657 aa24.18■■□□□ 1.46
LAPTM4B-204ENST00000619747 AXIN2Q9Y2T1 843 aa24.18■■□□□ 1.46
LAPTM4B-204ENST00000619747 MAP3K5Q99683 1374 aa24.18■■□□□ 1.46
LAPTM4B-204ENST00000619747 NWD1Q149M9 1564 aa24.18■■□□□ 1.46
LAPTM4B-204ENST00000619747 TAF7Q15545 349 aaPredicted RBP24.17■■□□□ 1.46
LAPTM4B-204ENST00000619747 STK31Q9BXU1 1019 aa24.17■■□□□ 1.46
LAPTM4B-204ENST00000619747 MSH6P52701 1360 aa24.17■■□□□ 1.46
LAPTM4B-204ENST00000619747 KIF24Q5T7B8 1368 aa24.17■■□□□ 1.46
LAPTM4B-204ENST00000619747 RGS12O14924 1447 aa24.16■■□□□ 1.46
LAPTM4B-204ENST00000619747 MPRIPQ6WCQ1 1025 aa24.16■■□□□ 1.46
LAPTM4B-204ENST00000619747 LTN1O94822 1766 aa24.16■■□□□ 1.46
LAPTM4B-204ENST00000619747 GCC1Q96CN9 775 aa24.15■■□□□ 1.46
LAPTM4B-204ENST00000619747 ATF3P18847 181 aa24.15■■□□□ 1.46
LAPTM4B-204ENST00000619747 EIF2S2P20042 333 aaKnown RBP24.15■■□□□ 1.46
LAPTM4B-204ENST00000619747 FKBP5Q13451 457 aaPredicted RBP24.15■■□□□ 1.46
LAPTM4B-204ENST00000619747 ARHGEF25Q86VW2 580 aa24.15■■□□□ 1.46
LAPTM4B-204ENST00000619747 A0A0U1RQG5 324 aaPredicted RBP24.14■■□□□ 1.45
LAPTM4B-204ENST00000619747 HTATSF1O43719 755 aaKnown RBP24.14■■□□□ 1.45
LAPTM4B-204ENST00000619747 CABLES1Q8TDN4 633 aa24.14■■□□□ 1.45
LAPTM4B-204ENST00000619747 PTPRCP08575 1304 aa24.14■■□□□ 1.45
LAPTM4B-204ENST00000619747 ANKRD24Q8TF21 1146 aa24.14■■□□□ 1.45
LAPTM4B-204ENST00000619747 KCNQ3O43525 872 aa24.13■■□□□ 1.45
LAPTM4B-204ENST00000619747 ZNF530Q6P9A1 599 aaPredicted RBP24.13■■□□□ 1.45
LAPTM4B-204ENST00000619747 C16orf71Q8IYS4 520 aaPredicted RBP24.13■■□□□ 1.45
LAPTM4B-204ENST00000619747 TMEM94Q12767 1356 aa24.12■■□□□ 1.45
LAPTM4B-204ENST00000619747 NFAT5O94916 1531 aa24.12■■□□□ 1.45
LAPTM4B-204ENST00000619747 RTL1A6NKG5 1358 aa24.11■■□□□ 1.45
LAPTM4B-204ENST00000619747 FLIIQ13045 1269 aa24.11■■□□□ 1.45
LAPTM4B-204ENST00000619747 TBC1D32Q96NH3 1257 aa24.11■■□□□ 1.45
LAPTM4B-204ENST00000619747 CCDC30Q5VVM6 783 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms