RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 FAM135AQ9P2D6 1515 aa13.03□□□□□ -0.32
HNF4A-209ENST00000619550 ERICH4A6NGS2 130 aa13.03□□□□□ -0.32
HNF4A-209ENST00000619550 KDM5BQ9UGL1 1544 aa13.03□□□□□ -0.32
HNF4A-209ENST00000619550 RBM33Q96EV2 1170 aaKnown RBP13.03□□□□□ -0.32
HNF4A-209ENST00000619550 HOOK1Q9UJC3 728 aaKnown RBP13.03□□□□□ -0.32
HNF4A-209ENST00000619550 AMOTL2Q9Y2J4 779 aa13.03□□□□□ -0.32
HNF4A-209ENST00000619550 KDM2BQ8NHM5 1336 aa13.03□□□□□ -0.32
HNF4A-209ENST00000619550 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.03□□□□□ -0.32
HNF4A-209ENST00000619550 EIF3JO75822 258 aaKnown RBP13.03□□□□□ -0.32
HNF4A-209ENST00000619550 UVSSAQ2YD98 709 aa13.03□□□□□ -0.32
HNF4A-209ENST00000619550 CREBRFQ8IUR6 639 aa13.03□□□□□ -0.32
HNF4A-209ENST00000619550 KIF6Q6ZMV9 814 aa13.02□□□□□ -0.32
HNF4A-209ENST00000619550 TRDNQ13061 729 aa13.02□□□□□ -0.33
HNF4A-209ENST00000619550 ALDH1L2Q3SY69 923 aa13.02□□□□□ -0.33
HNF4A-209ENST00000619550 FEZ1Q99689 392 aa13.02□□□□□ -0.33
HNF4A-209ENST00000619550 NUP153P49790 1475 aaKnown RBP13.02□□□□□ -0.33
HNF4A-209ENST00000619550 CABP4P57796 275 aa13.02□□□□□ -0.33
HNF4A-209ENST00000619550 HDAC1Q13547 482 aaPredicted RBP13.02□□□□□ -0.33
HNF4A-209ENST00000619550 LRSAM1Q6UWE0 723 aa13.02□□□□□ -0.33
HNF4A-209ENST00000619550 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
HNF4A-209ENST00000619550 PCDHB15Q9Y5E8 787 aa13.02□□□□□ -0.33
HNF4A-209ENST00000619550 TNRQ92752 1358 aa13.02□□□□□ -0.33
HNF4A-209ENST00000619550 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
HNF4A-209ENST00000619550 AIMP1Q12904 312 aaKnown RBP13.01□□□□□ -0.33
HNF4A-209ENST00000619550 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
HNF4A-209ENST00000619550 SMC5Q8IY18 1101 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 FAM107BQ9H098 131 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 NUP62CLQ9H1M0 184 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 HDGFL1Q5TGJ6 251 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 CLASRPQ8N2M8 674 aaKnown RBP13.01□□□□□ -0.33
HNF4A-209ENST00000619550 C14orf93Q9H972 538 aaKnown RBP13.01□□□□□ -0.33
HNF4A-209ENST00000619550 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 GNAI2P04899 355 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 USP25Q9UHP3 1055 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 WASLO00401 505 aaPredicted RBP13.01□□□□□ -0.33
HNF4A-209ENST00000619550 RBM25P49756 843 aaKnown RBP13.01□□□□□ -0.33
HNF4A-209ENST00000619550 RAB3GAP1Q15042 981 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 A2MP01023 1474 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 DUOX2Q9NRD8 1548 aa13.01□□□□□ -0.33
HNF4A-209ENST00000619550 RALGAPBQ86X10 1494 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 TRIM34Q9BYJ4 488 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 SRCIN1Q9C0H9 1055 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 NSD3Q9BZ95 1437 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 SEC24BO95487 1268 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 TBC1D9Q6ZT07 1266 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
HNF4A-209ENST00000619550 LRRCC1Q9C099 1032 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 CPLX1O14810 134 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 TRIM27P14373 513 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 ABCC10Q5T3U5 1492 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 SMC2O95347 1197 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 KRT222Q8N1A0 295 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 CYP46A1Q9Y6A2 500 aa13□□□□□ -0.33
HNF4A-209ENST00000619550 TARBP1Q13395 1621 aaKnown RBP13□□□□□ -0.33
HNF4A-209ENST00000619550 ABCC11Q96J66 1382 aa12.99□□□□□ -0.33
HNF4A-209ENST00000619550 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
HNF4A-209ENST00000619550 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
HNF4A-209ENST00000619550 IPO7O95373 1038 aaKnown RBP12.99□□□□□ -0.33
HNF4A-209ENST00000619550 ERC1Q8IUD2 1116 aa12.99□□□□□ -0.33
HNF4A-209ENST00000619550 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
HNF4A-209ENST00000619550 SCAF11Q99590 1463 aaKnown RBP12.99□□□□□ -0.33
HNF4A-209ENST00000619550 SURF6O75683 361 aaKnown RBP12.99□□□□□ -0.33
HNF4A-209ENST00000619550 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
HNF4A-209ENST00000619550 SF3B2Q13435 895 aaKnown RBP12.99□□□□□ -0.33
HNF4A-209ENST00000619550 RASSF8Q8NHQ8 419 aa12.99□□□□□ -0.33
HNF4A-209ENST00000619550 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
HNF4A-209ENST00000619550 UTP14CQ5TAP6 766 aaKnown RBP12.99□□□□□ -0.33
HNF4A-209ENST00000619550 WAPLQ7Z5K2 1190 aa12.99□□□□□ -0.33
HNF4A-209ENST00000619550 ADGRF5Q8IZF2 1346 aa12.98□□□□□ -0.33
HNF4A-209ENST00000619550 CDR1P51861 262 aa12.98□□□□□ -0.33
HNF4A-209ENST00000619550 ANKRD20A12PQ8NF67 263 aa12.98□□□□□ -0.33
HNF4A-209ENST00000619550 ERLIN1O75477 346 aa12.98□□□□□ -0.33
HNF4A-209ENST00000619550 LARP1BQ659C4 914 aaKnown RBP12.98□□□□□ -0.33
HNF4A-209ENST00000619550 NSD2O96028 1365 aa12.98□□□□□ -0.33
HNF4A-209ENST00000619550 MARCH6O60337 910 aa12.98□□□□□ -0.33
HNF4A-209ENST00000619550 ADCY5O95622 1261 aa12.98□□□□□ -0.33
HNF4A-209ENST00000619550 OLFM4Q6UX06 510 aa12.98□□□□□ -0.33
HNF4A-209ENST00000619550 TRIM29Q14134 588 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 TXLNBQ8N3L3 684 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 RBM27Q9P2N5 1060 aaKnown RBP12.97□□□□□ -0.33
HNF4A-209ENST00000619550 HIP1O00291 1037 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 GTF2A1P52655 376 aaPredicted RBP12.97□□□□□ -0.33
HNF4A-209ENST00000619550 ANKRD1Q15327 319 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 TMCO3Q6UWJ1 677 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 RUFY1Q96T51 708 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 UHRF1BP1LA0JNW5 1464 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 DISP3Q9P2K9 1392 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 PES1O00541 588 aaKnown RBP12.97□□□□□ -0.33
HNF4A-209ENST00000619550 CEBPAP49715 358 aaPredicted RBP12.97□□□□□ -0.33
HNF4A-209ENST00000619550 PTPN14Q15678 1187 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 NFE2L2Q16236 605 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 AMOTQ4VCS5 1084 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 SAMD9Q5K651 1589 aa12.97□□□□□ -0.33
HNF4A-209ENST00000619550 NOLC1Q14978 699 aaKnown RBP eCLIP12.97□□□□□ -0.332e-6■■■■■ 30.6
HNF4A-209ENST00000619550 ZNF396Q96N95 335 aaPredicted RBP12.97□□□□□ -0.33
HNF4A-209ENST00000619550 PATL2C9JE40 543 aaKnown RBP12.96□□□□□ -0.33
HNF4A-209ENST00000619550 CLSTN1O94985 981 aa12.96□□□□□ -0.33
HNF4A-209ENST00000619550 NUCB1Q02818 461 aa12.96□□□□□ -0.33
HNF4A-209ENST00000619550 GIMAP7Q8NHV1 300 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms