RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 HMOX1P09601 288 aa16.82■□□□□ 0.28
CNTNAP3B-215ENST00000619138 C16orf71Q8IYS4 520 aaPredicted RBP16.81■□□□□ 0.28
CNTNAP3B-215ENST00000619138 NINLQ9Y2I6 1382 aa16.81■□□□□ 0.28
CNTNAP3B-215ENST00000619138 CIZ1Q9ULV3 898 aaPredicted RBP16.81■□□□□ 0.28
CNTNAP3B-215ENST00000619138 EMILIN1Q9Y6C2 1016 aa16.81■□□□□ 0.28
CNTNAP3B-215ENST00000619138 KLHL40Q2TBA0 621 aa16.81■□□□□ 0.28
CNTNAP3B-215ENST00000619138 PTPRUQ92729 1446 aa16.81■□□□□ 0.28
CNTNAP3B-215ENST00000619138 CDK11BP21127 795 aaKnown RBP16.8■□□□□ 0.28
CNTNAP3B-215ENST00000619138 SMARCA5O60264 1052 aaPredicted RBP16.79■□□□□ 0.28
CNTNAP3B-215ENST00000619138 MYOM1P52179 1685 aa16.79■□□□□ 0.28
CNTNAP3B-215ENST00000619138 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
CNTNAP3B-215ENST00000619138 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
CNTNAP3B-215ENST00000619138 PTMSP20962 102 aa16.79■□□□□ 0.28
CNTNAP3B-215ENST00000619138 NPC1L1Q9UHC9 1359 aa16.78■□□□□ 0.28
CNTNAP3B-215ENST00000619138 TMPOP42166 694 aaKnown RBP16.78■□□□□ 0.28
CNTNAP3B-215ENST00000619138 MYO3AQ8NEV4 1616 aa16.78■□□□□ 0.28
CNTNAP3B-215ENST00000619138 KIF16BQ96L93 1317 aa16.78■□□□□ 0.28
CNTNAP3B-215ENST00000619138 CEP170BQ9Y4F5 1589 aaPredicted RBP16.78■□□□□ 0.28
CNTNAP3B-215ENST00000619138 NUCB1Q02818 461 aa16.78■□□□□ 0.28
CNTNAP3B-215ENST00000619138 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
CNTNAP3B-215ENST00000619138 NLRP6P59044 892 aa16.78■□□□□ 0.28
CNTNAP3B-215ENST00000619138 CDC45O75419 566 aa16.77■□□□□ 0.28
CNTNAP3B-215ENST00000619138 PSME1Q06323 249 aa16.77■□□□□ 0.28
CNTNAP3B-215ENST00000619138 RBM25P49756 843 aaKnown RBP16.77■□□□□ 0.27
CNTNAP3B-215ENST00000619138 HDAC1Q13547 482 aaPredicted RBP16.77■□□□□ 0.27
CNTNAP3B-215ENST00000619138 SIRT1Q96EB6 747 aa16.77■□□□□ 0.27
CNTNAP3B-215ENST00000619138 SNX21Q969T3 373 aa16.76■□□□□ 0.27
CNTNAP3B-215ENST00000619138 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
CNTNAP3B-215ENST00000619138 AAMPQ13685 434 aa16.76■□□□□ 0.27
CNTNAP3B-215ENST00000619138 CHMP3Q9Y3E7 222 aa16.76■□□□□ 0.27
CNTNAP3B-215ENST00000619138 NUCB2P80303 420 aa16.76■□□□□ 0.27
CNTNAP3B-215ENST00000619138 KIAA2012Q0VF49 1180 aa16.76■□□□□ 0.27
CNTNAP3B-215ENST00000619138 ZBTB40Q9NUA8 1239 aa16.76■□□□□ 0.27
CNTNAP3B-215ENST00000619138 NSFL1CQ9UNZ2 370 aaKnown RBP16.76■□□□□ 0.27
CNTNAP3B-215ENST00000619138 ABTB2Q8N961 1025 aa16.75■□□□□ 0.27
CNTNAP3B-215ENST00000619138 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
CNTNAP3B-215ENST00000619138 ST18O60284 1047 aa16.75■□□□□ 0.27
CNTNAP3B-215ENST00000619138 NEK4P51957 841 aa16.75■□□□□ 0.27
CNTNAP3B-215ENST00000619138 OTUD7AQ8TE49 926 aaPredicted RBP16.75■□□□□ 0.27
CNTNAP3B-215ENST00000619138 SETD1BQ9UPS6 1966 aaKnown RBP16.74■□□□□ 0.27
CNTNAP3B-215ENST00000619138 FOXO3O43524 673 aa16.74■□□□□ 0.27
CNTNAP3B-215ENST00000619138 TSHZ3Q63HK5 1081 aa16.74■□□□□ 0.27
CNTNAP3B-215ENST00000619138 NRXN3Q9Y4C0 1643 aa16.74■□□□□ 0.27
CNTNAP3B-215ENST00000619138 TAOK2Q9UL54 1235 aa16.74■□□□□ 0.27
CNTNAP3B-215ENST00000619138 TTC21BQ7Z4L5 1316 aa16.74■□□□□ 0.27
CNTNAP3B-215ENST00000619138 PPP1R9BQ96SB3 815 aa16.74■□□□□ 0.27
CNTNAP3B-215ENST00000619138 LARP6Q9BRS8 491 aaKnown RBP16.74■□□□□ 0.27
CNTNAP3B-215ENST00000619138 TTC12Q9H892 705 aaPredicted RBP16.73■□□□□ 0.27
CNTNAP3B-215ENST00000619138 AMPHP49418 695 aa16.73■□□□□ 0.27
CNTNAP3B-215ENST00000619138 BMP2KLQ5H9B9 411 aa16.73■□□□□ 0.27
CNTNAP3B-215ENST00000619138 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
CNTNAP3B-215ENST00000619138 ZKSCAN5Q9Y2L8 839 aa16.73■□□□□ 0.27
CNTNAP3B-215ENST00000619138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.73■□□□□ 0.27
CNTNAP3B-215ENST00000619138 A0A0G2JS52 829 aa16.73■□□□□ 0.27
CNTNAP3B-215ENST00000619138 KIF2CQ99661 725 aa16.73■□□□□ 0.27
CNTNAP3B-215ENST00000619138 NSD2O96028 1365 aa16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 TMEM63CQ9P1W3 806 aa16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 POLKQ9UBT6 870 aa16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 NPHP4O75161 1426 aaPredicted RBP16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 SLC4A10Q6U841 1118 aa16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 CCDC39Q9UFE4 941 aa16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 USP25Q9UHP3 1055 aa16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 SPC24Q8NBT2 197 aa16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 LMBRD1Q9NUN5 540 aa16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 DLC1Q96QB1 1528 aa16.72■□□□□ 0.27
CNTNAP3B-215ENST00000619138 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.27
CNTNAP3B-215ENST00000619138 TSPYL6Q8N831 410 aa16.71■□□□□ 0.27
CNTNAP3B-215ENST00000619138 MAP7D2Q96T17 732 aa16.71■□□□□ 0.27
CNTNAP3B-215ENST00000619138 NOL7Q9UMY1 257 aaKnown RBP16.71■□□□□ 0.27
CNTNAP3B-215ENST00000619138 ATF3P18847 181 aa16.71■□□□□ 0.27
CNTNAP3B-215ENST00000619138 CSPP1Q1MSJ5 1256 aa16.71■□□□□ 0.27
CNTNAP3B-215ENST00000619138 GPT2Q8TD30 523 aa16.71■□□□□ 0.27
CNTNAP3B-215ENST00000619138 SLIT1O75093 1534 aa16.7■□□□□ 0.26
CNTNAP3B-215ENST00000619138 PRKAR2BP31323 418 aa16.7■□□□□ 0.26
CNTNAP3B-215ENST00000619138 ORAI2Q96SN7 254 aa16.7■□□□□ 0.26
CNTNAP3B-215ENST00000619138 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
CNTNAP3B-215ENST00000619138 POLR3AO14802 1390 aaPredicted RBP16.7■□□□□ 0.26
CNTNAP3B-215ENST00000619138 RABEP1Q15276 862 aa16.7■□□□□ 0.26
CNTNAP3B-215ENST00000619138 RILPL2Q969X0 211 aa16.7■□□□□ 0.26
CNTNAP3B-215ENST00000619138 TRIM6-TRIM34B2RNG4 842 aa16.69■□□□□ 0.26
CNTNAP3B-215ENST00000619138 SASS6Q6UVJ0 657 aa16.69■□□□□ 0.26
CNTNAP3B-215ENST00000619138 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
CNTNAP3B-215ENST00000619138 DCTN1Q14203 1278 aa16.69■□□□□ 0.26
CNTNAP3B-215ENST00000619138 CCDC27Q2M243 656 aa16.69■□□□□ 0.26
CNTNAP3B-215ENST00000619138 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.68■□□□□ 0.26
CNTNAP3B-215ENST00000619138 PPP4R3BQ5MIZ7 849 aa16.68■□□□□ 0.26
CNTNAP3B-215ENST00000619138 TECPR2O15040 1411 aa16.67■□□□□ 0.26
CNTNAP3B-215ENST00000619138 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
CNTNAP3B-215ENST00000619138 PLEKHG3A1L390 1219 aa16.67■□□□□ 0.26
CNTNAP3B-215ENST00000619138 TSPY26PQ9H489 355 aa16.67■□□□□ 0.26
CNTNAP3B-215ENST00000619138 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
CNTNAP3B-215ENST00000619138 EDC4Q6P2E9 1401 aaKnown RBP16.67■□□□□ 0.26
CNTNAP3B-215ENST00000619138 CD163L1Q9NR16 1453 aa16.67■□□□□ 0.26
CNTNAP3B-215ENST00000619138 ANO2Q9NQ90 1003 aa16.67■□□□□ 0.26
CNTNAP3B-215ENST00000619138 DDIT3P35638 169 aa16.66■□□□□ 0.26
CNTNAP3B-215ENST00000619138 GSPT1P15170 499 aaKnown RBP16.65■□□□□ 0.26
CNTNAP3B-215ENST00000619138 HSP90AB2PQ58FF8 381 aa16.65■□□□□ 0.26
CNTNAP3B-215ENST00000619138 INTS3Q68E01 1043 aaKnown RBP16.65■□□□□ 0.26
CNTNAP3B-215ENST00000619138 GCC1Q96CN9 775 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms