RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 ZNF500O60304 480 aaPredicted RBP19.58■□□□□ 0.72
SEMA3B-214ENST00000619119 IGSF3O75054 1194 aa19.58■□□□□ 0.72
SEMA3B-214ENST00000619119 CCDC27Q2M243 656 aa19.58■□□□□ 0.72
SEMA3B-214ENST00000619119 PHACTR3Q96KR7 559 aa19.58■□□□□ 0.72
SEMA3B-214ENST00000619119 NOL7Q9UMY1 257 aaKnown RBP19.58■□□□□ 0.72
SEMA3B-214ENST00000619119 PLEKHG3A1L390 1219 aa19.57■□□□□ 0.72
SEMA3B-214ENST00000619119 SKOR2Q2VWA4 1001 aaPredicted RBP19.57■□□□□ 0.72
SEMA3B-214ENST00000619119 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.57■□□□□ 0.72
SEMA3B-214ENST00000619119 LETM1O95202 739 aaPredicted RBP19.56■□□□□ 0.72
SEMA3B-214ENST00000619119 CDK11BP21127 795 aaKnown RBP19.56■□□□□ 0.72
SEMA3B-214ENST00000619119 NUTM2GQ5VZR2 741 aa19.56■□□□□ 0.72
SEMA3B-214ENST00000619119 FOXD4L1Q9NU39 408 aa19.56■□□□□ 0.72
SEMA3B-214ENST00000619119 COG6Q9Y2V7 657 aa19.56■□□□□ 0.72
SEMA3B-214ENST00000619119 CGNQ9P2M7 1197 aaKnown RBP19.56■□□□□ 0.72
SEMA3B-214ENST00000619119 PANK1Q8TE04 598 aa19.56■□□□□ 0.72
SEMA3B-214ENST00000619119 FCHSD2O94868 740 aa19.55■□□□□ 0.72
SEMA3B-214ENST00000619119 IL13P35225 146 aa19.55■□□□□ 0.72
SEMA3B-214ENST00000619119 CLUAP1Q96AJ1 413 aa19.55■□□□□ 0.72
SEMA3B-214ENST00000619119 THUMPD2Q9BTF0 503 aaKnown RBP19.55■□□□□ 0.72
SEMA3B-214ENST00000619119 CSPP1Q1MSJ5 1256 aa19.54■□□□□ 0.72
SEMA3B-214ENST00000619119 RARSP54136 660 aaKnown RBP19.54■□□□□ 0.72
SEMA3B-214ENST00000619119 USP6P35125 1406 aa19.54■□□□□ 0.72
SEMA3B-214ENST00000619119 ITSN1Q15811 1721 aa19.53■□□□□ 0.72
SEMA3B-214ENST00000619119 TNNQ9UQP3 1299 aa19.53■□□□□ 0.72
SEMA3B-214ENST00000619119 PTCH1Q13635 1447 aa19.53■□□□□ 0.72
SEMA3B-214ENST00000619119 EXOSC9Q06265 439 aaKnown RBP19.52■□□□□ 0.72
SEMA3B-214ENST00000619119 MON2Q7Z3U7 1717 aa19.52■□□□□ 0.72
SEMA3B-214ENST00000619119 C14orf37Q86TY3 774 aa19.52■□□□□ 0.72
SEMA3B-214ENST00000619119 ADGRB2O60241 1585 aa19.52■□□□□ 0.72
SEMA3B-214ENST00000619119 ATP2B3Q16720 1220 aa19.52■□□□□ 0.71
SEMA3B-214ENST00000619119 PDZRN3Q9UPQ7 1066 aa19.52■□□□□ 0.71
SEMA3B-214ENST00000619119 ZKSCAN5Q9Y2L8 839 aa19.52■□□□□ 0.71
SEMA3B-214ENST00000619119 DDX49Q9Y6V7 483 aaKnown RBP19.52■□□□□ 0.71
SEMA3B-214ENST00000619119 LRRC7Q96NW7 1537 aa19.51■□□□□ 0.71
SEMA3B-214ENST00000619119 HSP90AB2PQ58FF8 381 aa19.51■□□□□ 0.71
SEMA3B-214ENST00000619119 AATKQ6ZMQ8 1374 aa19.5■□□□□ 0.71
SEMA3B-214ENST00000619119 SPDYE4A6NLX3 237 aa19.5■□□□□ 0.71
SEMA3B-214ENST00000619119 FAM177BA6PVY3 158 aa19.5■□□□□ 0.71
SEMA3B-214ENST00000619119 DNTTIP2Q5QJE6 756 aaKnown RBP19.5■□□□□ 0.71
SEMA3B-214ENST00000619119 AEBP1Q8IUX7 1158 aa19.5■□□□□ 0.71
SEMA3B-214ENST00000619119 DHX37Q8IY37 1157 aaKnown RBP19.5■□□□□ 0.71
SEMA3B-214ENST00000619119 HSP90AB1P08238 724 aaKnown RBP19.5■□□□□ 0.71
SEMA3B-214ENST00000619119 AKAP12Q02952 1782 aa19.5■□□□□ 0.71
SEMA3B-214ENST00000619119 DIP2AQ14689 1571 aa19.5■□□□□ 0.71
SEMA3B-214ENST00000619119 HS1BP3Q53T59 392 aa19.48■□□□□ 0.71
SEMA3B-214ENST00000619119 RGPD8O14715 1765 aaPredicted RBP19.48■□□□□ 0.71
SEMA3B-214ENST00000619119 EIF4A2Q14240 407 aaKnown RBP19.48■□□□□ 0.71
SEMA3B-214ENST00000619119 NLRP6P59044 892 aa19.48■□□□□ 0.71
SEMA3B-214ENST00000619119 SULT6B1Q6IMI4 303 aa19.48■□□□□ 0.71
SEMA3B-214ENST00000619119 CDK12Q9NYV4 1490 aaPredicted RBP19.47■□□□□ 0.71
SEMA3B-214ENST00000619119 ZNF710Q8N1W2 664 aa19.47■□□□□ 0.71
SEMA3B-214ENST00000619119 RAB3GAP1Q15042 981 aa19.46■□□□□ 0.71
SEMA3B-214ENST00000619119 NFE2L2Q16236 605 aa19.46■□□□□ 0.71
SEMA3B-214ENST00000619119 FAM83GA6ND36 823 aa19.46■□□□□ 0.71
SEMA3B-214ENST00000619119 DCTN1Q14203 1278 aa19.46■□□□□ 0.71
SEMA3B-214ENST00000619119 RLBP1P12271 317 aa19.46■□□□□ 0.71
SEMA3B-214ENST00000619119 OVOS2A0A0J9YW53 1432 aa19.45■□□□□ 0.7
SEMA3B-214ENST00000619119 OVOS2Q6IE36 1432 aa19.45■□□□□ 0.7
SEMA3B-214ENST00000619119 RBSNQ9H1K0 784 aa19.45■□□□□ 0.7
SEMA3B-214ENST00000619119 SMC4Q9NTJ3 1288 aa19.45■□□□□ 0.7
SEMA3B-214ENST00000619119 TOPAZ1Q8N9V7 1692 aa19.45■□□□□ 0.7
SEMA3B-214ENST00000619119 DDIT3P35638 169 aa19.45■□□□□ 0.7
SEMA3B-214ENST00000619119 GOLGA6L22H0YM25 854 aa19.44■□□□□ 0.7
SEMA3B-214ENST00000619119 ADAMTSL3P82987 1691 aa19.44■□□□□ 0.7
SEMA3B-214ENST00000619119 MAP3K19Q56UN5 1328 aa19.44■□□□□ 0.7
SEMA3B-214ENST00000619119 PTMSP20962 102 aa19.44■□□□□ 0.7
SEMA3B-214ENST00000619119 SSFA2P28290 1259 aa19.44■□□□□ 0.7
SEMA3B-214ENST00000619119 XRN1Q8IZH2 1706 aaKnown RBP19.44■□□□□ 0.7
SEMA3B-214ENST00000619119 ELL2O00472 640 aaPredicted RBP19.44■□□□□ 0.7
SEMA3B-214ENST00000619119 CAVIN1Q6NZI2 390 aaKnown RBP19.44■□□□□ 0.7
SEMA3B-214ENST00000619119 ZNF771Q7L3S4 317 aaPredicted RBP19.44■□□□□ 0.7
SEMA3B-214ENST00000619119 ABTB2Q8N961 1025 aa19.44■□□□□ 0.7
SEMA3B-214ENST00000619119 PDE3AQ14432 1141 aa19.43■□□□□ 0.7
SEMA3B-214ENST00000619119 ESCO1Q5FWF5 840 aa19.43■□□□□ 0.7
SEMA3B-214ENST00000619119 MYRIPQ8NFW9 859 aa19.43■□□□□ 0.7
SEMA3B-214ENST00000619119 CHMP4AQ9BY43 222 aa19.43■□□□□ 0.7
SEMA3B-214ENST00000619119 AMPHP49418 695 aa19.42■□□□□ 0.7
SEMA3B-214ENST00000619119 PIK3R4Q99570 1358 aa19.42■□□□□ 0.7
SEMA3B-214ENST00000619119 SSH1Q8WYL5 1049 aa19.42■□□□□ 0.7
SEMA3B-214ENST00000619119 PCDHB15Q9Y5E8 787 aa19.42■□□□□ 0.7
SEMA3B-214ENST00000619119 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
SEMA3B-214ENST00000619119 TTC21AQ8NDW8 1320 aa19.41■□□□□ 0.7
SEMA3B-214ENST00000619119 SSH2Q76I76 1423 aa19.41■□□□□ 0.7
SEMA3B-214ENST00000619119 SETD1BQ9UPS6 1966 aaKnown RBP19.41■□□□□ 0.7
SEMA3B-214ENST00000619119 PDLIM2Q96JY6 352 aa19.41■□□□□ 0.7
SEMA3B-214ENST00000619119 NRKQ7Z2Y5 1582 aa19.41■□□□□ 0.7
SEMA3B-214ENST00000619119 KLHL40Q2TBA0 621 aa19.41■□□□□ 0.7
SEMA3B-214ENST00000619119 CIZ1Q9ULV3 898 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-214ENST00000619119 PHF8Q9UPP1 1060 aa19.41■□□□□ 0.7
SEMA3B-214ENST00000619119 TULP1O00294 542 aaPredicted RBP19.4■□□□□ 0.7
SEMA3B-214ENST00000619119 NCOA3Q9Y6Q9 1424 aa19.4■□□□□ 0.7
SEMA3B-214ENST00000619119 PTMAP06454 111 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-214ENST00000619119 TAF3Q5VWG9 929 aa19.4■□□□□ 0.7
SEMA3B-214ENST00000619119 SMC5Q8IY18 1101 aa19.4■□□□□ 0.7
SEMA3B-214ENST00000619119 LTV1Q96GA3 475 aaPredicted RBP19.4■□□□□ 0.7
SEMA3B-214ENST00000619119 NPHP4O75161 1426 aaPredicted RBP19.39■□□□□ 0.69
SEMA3B-214ENST00000619119 CCDC39Q9UFE4 941 aa19.38■□□□□ 0.69
SEMA3B-214ENST00000619119 IL16Q14005 1332 aa19.38■□□□□ 0.69
SEMA3B-214ENST00000619119 MPNDQ8N594 471 aa19.38■□□□□ 0.69
SEMA3B-214ENST00000619119 PRIM1P49642 420 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms