RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 MRVI1Q9Y6F6 885 aa19.19■□□□□ 0.66
CNTNAP3B-214ENST00000618777 TOP1P11387 765 aaKnown RBP19.19■□□□□ 0.66
CNTNAP3B-214ENST00000618777 CCDC113Q9H0I3 377 aa19.19■□□□□ 0.66
CNTNAP3B-214ENST00000618777 GCOM1H8Y6P7 765 aaPredicted RBP19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 MYZAPP0CAP1 466 aa19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 CEP135Q66GS9 1140 aa19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 TCP11L2Q8N4U5 519 aa19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 TRMT1Q9NXH9 659 aaKnown RBP19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 PAFAH1B1P43034 410 aa19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 STK3Q13188 491 aa19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 ZNF397Q8NF99 534 aaPredicted RBP19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 SCAND2PQ9GZW5 306 aaPredicted RBP19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 ADCY5O95622 1261 aa19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 SPA17Q15506 151 aa19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 ERC1Q8IUD2 1116 aa19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 SNW1Q13573 536 aaKnown RBP19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 LRCH2Q5VUJ6 765 aa19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 VPS37DQ86XT2 251 aa19.18■□□□□ 0.66
CNTNAP3B-214ENST00000618777 BLOC1S2Q6QNY1 142 aa19.17■□□□□ 0.66
CNTNAP3B-214ENST00000618777 TRIM22Q8IYM9 498 aa19.17■□□□□ 0.66
CNTNAP3B-214ENST00000618777 CEP63Q96MT8 703 aa19.17■□□□□ 0.66
CNTNAP3B-214ENST00000618777 BCAR3O75815 825 aa19.17■□□□□ 0.66
CNTNAP3B-214ENST00000618777 CAPN2P17655 700 aa19.17■□□□□ 0.66
CNTNAP3B-214ENST00000618777 CAMK4Q16566 473 aa19.17■□□□□ 0.66
CNTNAP3B-214ENST00000618777 PDRG1Q9NUG6 133 aa19.17■□□□□ 0.66
CNTNAP3B-214ENST00000618777 KRT18P05783 430 aaKnown RBP19.17■□□□□ 0.66
CNTNAP3B-214ENST00000618777 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
CNTNAP3B-214ENST00000618777 KIF3BO15066 747 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 SRCIN1Q9C0H9 1055 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 MAP2K2P36507 400 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 CEP57Q86XR8 500 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 MIA2Q96PC5 1412 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 CCDC171Q6TFL3 1326 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 CTAGE5O15320 804 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 KDM4AO75164 1064 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 MLECQ14165 292 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 KLHL40Q2TBA0 621 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 TBC1D2Q9BYX2 928 aa19.16■□□□□ 0.66
CNTNAP3B-214ENST00000618777 EXOSC9Q06265 439 aaKnown RBP19.15■□□□□ 0.66
CNTNAP3B-214ENST00000618777 UTP14CQ5TAP6 766 aaKnown RBP19.15■□□□□ 0.66
CNTNAP3B-214ENST00000618777 TMX1Q9H3N1 280 aa19.15■□□□□ 0.66
CNTNAP3B-214ENST00000618777 ARFGAP3Q9NP61 516 aa19.15■□□□□ 0.66
CNTNAP3B-214ENST00000618777 GNAI2P04899 355 aa19.15■□□□□ 0.66
CNTNAP3B-214ENST00000618777 WDR66Q8TBY9 1149 aa19.15■□□□□ 0.66
CNTNAP3B-214ENST00000618777 RAI14Q9P0K7 980 aa19.15■□□□□ 0.66
CNTNAP3B-214ENST00000618777 NAA25Q14CX7 972 aa19.15■□□□□ 0.66
CNTNAP3B-214ENST00000618777 SPECC1Q5M775 1068 aa19.14■□□□□ 0.65
CNTNAP3B-214ENST00000618777 PLEKHH1Q9ULM0 1364 aa19.14■□□□□ 0.65
CNTNAP3B-214ENST00000618777 SSFA2P28290 1259 aa19.13■□□□□ 0.65
CNTNAP3B-214ENST00000618777 RSRC1Q96IZ7 334 aaKnown RBP19.13■□□□□ 0.65
CNTNAP3B-214ENST00000618777 NAA15Q9BXJ9 866 aaKnown RBP19.13■□□□□ 0.65
CNTNAP3B-214ENST00000618777 C1orf115Q9H7X2 142 aa19.13■□□□□ 0.65
CNTNAP3B-214ENST00000618777 NOL7Q9UMY1 257 aaKnown RBP19.13■□□□□ 0.65
CNTNAP3B-214ENST00000618777 STAMBPO95630 424 aa19.13■□□□□ 0.65
CNTNAP3B-214ENST00000618777 DMTNQ08495 405 aa19.13■□□□□ 0.65
CNTNAP3B-214ENST00000618777 NOB1Q9ULX3 412 aaKnown RBP19.13■□□□□ 0.65
CNTNAP3B-214ENST00000618777 TBC1D2BQ9UPU7 963 aa19.13■□□□□ 0.65
CNTNAP3B-214ENST00000618777 CDKL5O76039 1030 aa19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 ATP6V1AP38606 617 aa19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 NUP133Q8WUM0 1156 aa19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 CAVIN2O95810 425 aa19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 BCCIPQ9P287 314 aaKnown RBP eCLIP19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 V9GYY5 206 aaPredicted RBP19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 KRBA2Q6ZNG9 492 aa19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 CCDC88BA6NC98 1476 aa19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 EBAG9O00559 213 aa19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 KRT32Q14532 448 aa19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 DDX19AQ9NUU7 478 aaKnown RBP19.12■□□□□ 0.65
CNTNAP3B-214ENST00000618777 C6orf163Q5TEZ5 329 aa19.11■□□□□ 0.65
CNTNAP3B-214ENST00000618777 PNISRQ8TF01 805 aaKnown RBP19.11■□□□□ 0.65
CNTNAP3B-214ENST00000618777 ATF7IPQ6VMQ6 1270 aa19.11■□□□□ 0.65
CNTNAP3B-214ENST00000618777 FMNL3Q8IVF7 1028 aa19.11■□□□□ 0.65
CNTNAP3B-214ENST00000618777 PPM1EQ8WY54 764 aa19.11■□□□□ 0.65
CNTNAP3B-214ENST00000618777 JAKMIP1Q96N16 626 aaKnown RBP19.11■□□□□ 0.65
CNTNAP3B-214ENST00000618777 USO1O60763 962 aaKnown RBP19.1■□□□□ 0.65
CNTNAP3B-214ENST00000618777 CERS3Q8IU89 383 aa19.1■□□□□ 0.65
CNTNAP3B-214ENST00000618777 AP1ARQ63HQ0 302 aa19.1■□□□□ 0.65
CNTNAP3B-214ENST00000618777 RIC3Q7Z5B4 369 aa19.1■□□□□ 0.65
CNTNAP3B-214ENST00000618777 SUDS3Q9H7L9 328 aaPredicted RBP19.09■□□□□ 0.65
CNTNAP3B-214ENST00000618777 ARID4AP29374 1257 aaPredicted RBP19.09■□□□□ 0.65
CNTNAP3B-214ENST00000618777 CEP112Q8N8E3 955 aa19.09■□□□□ 0.65
CNTNAP3B-214ENST00000618777 CCDC150Q8NCX0 1101 aa19.09■□□□□ 0.65
CNTNAP3B-214ENST00000618777 HNRNPMP52272 730 aaKnown RBP eCLIP19.09■□□□□ 0.65
CNTNAP3B-214ENST00000618777 CCDC30Q5VVM6 783 aa19.09■□□□□ 0.65
CNTNAP3B-214ENST00000618777 SWAP70Q9UH65 585 aa19.09■□□□□ 0.65
CNTNAP3B-214ENST00000618777 TUBB4AP04350 444 aa19.08■□□□□ 0.65
CNTNAP3B-214ENST00000618777 PPP2R1AP30153 589 aa19.08■□□□□ 0.65
CNTNAP3B-214ENST00000618777 FBF1Q8TES7 1133 aa19.08■□□□□ 0.64
CNTNAP3B-214ENST00000618777 VGFO15240 615 aaPredicted RBP19.08■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CETN2P41208 172 aa19.08■□□□□ 0.64
CNTNAP3B-214ENST00000618777 NUTM2DQ5VT03 806 aaPredicted RBP19.08■□□□□ 0.64
CNTNAP3B-214ENST00000618777 TWISTNBQ3B726 338 aaPredicted RBP19.07■□□□□ 0.64
CNTNAP3B-214ENST00000618777 SRRTQ9BXP5 876 aaKnown RBP19.07■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CARMIL2Q6F5E8 1435 aa19.07■□□□□ 0.64
CNTNAP3B-214ENST00000618777 LRSAM1Q6UWE0 723 aa19.07■□□□□ 0.64
CNTNAP3B-214ENST00000618777 RPAINQ86UA6 219 aa19.07■□□□□ 0.64
CNTNAP3B-214ENST00000618777 OTUD6BQ8N6M0 293 aa19.07■□□□□ 0.64
CNTNAP3B-214ENST00000618777 BAG4O95429 457 aaKnown RBP19.07■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
CNTNAP3B-214ENST00000618777 SLU7O95391 586 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms