RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 USP19O94966 1318 aa15.63■□□□□ 0.09
CIITA-212ENST00000618207 IGSF1Q8N6C5 1336 aa15.63■□□□□ 0.09
CIITA-212ENST00000618207 APBB1O00213 710 aa15.63■□□□□ 0.09
CIITA-212ENST00000618207 PROSER2Q86WR7 435 aaPredicted RBP15.63■□□□□ 0.09
CIITA-212ENST00000618207 SMC5Q8IY18 1101 aa15.63■□□□□ 0.09
CIITA-212ENST00000618207 ARHGEF10O15013 1369 aa15.63■□□□□ 0.09
CIITA-212ENST00000618207 PIK3R4Q99570 1358 aa15.63■□□□□ 0.09
CIITA-212ENST00000618207 F6X3S4 739 aa15.63■□□□□ 0.09
CIITA-212ENST00000618207 MFAP1P55081 439 aaKnown RBP15.63■□□□□ 0.09
CIITA-212ENST00000618207 RTL5Q5HYW3 569 aaPredicted RBP15.63■□□□□ 0.09
CIITA-212ENST00000618207 ARHGAP45Q92619 1136 aa15.63■□□□□ 0.09
CIITA-212ENST00000618207 LRRC59Q96AG4 307 aaKnown RBP15.63■□□□□ 0.09
CIITA-212ENST00000618207 API5Q9BZZ5 524 aaKnown RBP15.63■□□□□ 0.09
CIITA-212ENST00000618207 ANKARQ7Z5J8 1434 aa15.62■□□□□ 0.09
CIITA-212ENST00000618207 BRPF1P55201 1214 aaPredicted RBP15.62■□□□□ 0.09
CIITA-212ENST00000618207 G2E3Q7L622 706 aa15.62■□□□□ 0.09
CIITA-212ENST00000618207 FMN2Q9NZ56 1722 aa15.62■□□□□ 0.09
CIITA-212ENST00000618207 GAS2L2Q8NHY3 880 aa15.62■□□□□ 0.09
CIITA-212ENST00000618207 CHD2O14647 1828 aaKnown RBP15.61■□□□□ 0.09
CIITA-212ENST00000618207 ABCC4O15439 1325 aa15.61■□□□□ 0.09
CIITA-212ENST00000618207 SIRT2Q8IXJ6 389 aa15.61■□□□□ 0.09
CIITA-212ENST00000618207 DDX17Q92841 729 aaKnown RBP15.61■□□□□ 0.09
CIITA-212ENST00000618207 UPF2Q9HAU5 1272 aaKnown RBP15.6■□□□□ 0.09
CIITA-212ENST00000618207 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
CIITA-212ENST00000618207 NBPF6Q5VWK0 638 aa15.6■□□□□ 0.09
CIITA-212ENST00000618207 CHD1LQ86WJ1 897 aa15.6■□□□□ 0.09
CIITA-212ENST00000618207 NBPF4Q96M43 638 aa15.6■□□□□ 0.09
CIITA-212ENST00000618207 CRB1P82279 1406 aa15.6■□□□□ 0.09
CIITA-212ENST00000618207 RGPD1P0DJD0 1748 aa15.59■□□□□ 0.09
CIITA-212ENST00000618207 NPHP4O75161 1426 aaPredicted RBP15.59■□□□□ 0.09
CIITA-212ENST00000618207 IL17REQ8NFR9 667 aa15.59■□□□□ 0.09
CIITA-212ENST00000618207 NUCB1Q02818 461 aa15.58■□□□□ 0.09
CIITA-212ENST00000618207 KDRP35968 1356 aa15.58■□□□□ 0.08
CIITA-212ENST00000618207 SPRYD3Q8NCJ5 442 aa15.58■□□□□ 0.08
CIITA-212ENST00000618207 PKNOX2Q96KN3 472 aa15.58■□□□□ 0.08
CIITA-212ENST00000618207 MEIS3Q99687 375 aa15.58■□□□□ 0.08
CIITA-212ENST00000618207 ADGRL3Q9HAR2 1447 aa15.56■□□□□ 0.08
CIITA-212ENST00000618207 ZC3H6P61129 1189 aaKnown RBP15.56■□□□□ 0.08
CIITA-212ENST00000618207 SLKQ9H2G2 1235 aaPredicted RBP15.56■□□□□ 0.08
CIITA-212ENST00000618207 PODXL2Q9NZ53 605 aa15.56■□□□□ 0.08
CIITA-212ENST00000618207 VIRMAQ69YN4 1812 aaKnown RBP15.56■□□□□ 0.08
CIITA-212ENST00000618207 IP6K1Q92551 441 aa15.56■□□□□ 0.08
CIITA-212ENST00000618207 LGR6Q9HBX8 967 aa15.56■□□□□ 0.08
CIITA-212ENST00000618207 MSH6P52701 1360 aa15.56■□□□□ 0.08
CIITA-212ENST00000618207 GCP02774 474 aa15.55■□□□□ 0.08
CIITA-212ENST00000618207 HSPA2P54652 639 aa15.55■□□□□ 0.08
CIITA-212ENST00000618207 CHMP4BQ9H444 224 aaKnown RBP15.55■□□□□ 0.08
CIITA-212ENST00000618207 ADAMTSL3P82987 1691 aa15.55■□□□□ 0.08
CIITA-212ENST00000618207 EIF2S2P20042 333 aaKnown RBP15.55■□□□□ 0.08
CIITA-212ENST00000618207 HAP1P54257 671 aaPredicted RBP15.55■□□□□ 0.08
CIITA-212ENST00000618207 STK31Q9BXU1 1019 aa15.55■□□□□ 0.08
CIITA-212ENST00000618207 FKBP5Q13451 457 aaPredicted RBP15.54■□□□□ 0.08
CIITA-212ENST00000618207 MARF1Q9Y4F3 1742 aaKnown RBP15.54■□□□□ 0.08
CIITA-212ENST00000618207 KIAA0232Q92628 1395 aa15.53■□□□□ 0.08
CIITA-212ENST00000618207 KRT28Q7Z3Y7 464 aa15.53■□□□□ 0.08
CIITA-212ENST00000618207 C16orf71Q8IYS4 520 aaPredicted RBP15.53■□□□□ 0.08
CIITA-212ENST00000618207 LTN1O94822 1766 aa15.53■□□□□ 0.08
CIITA-212ENST00000618207 INTS3Q68E01 1043 aaKnown RBP15.53■□□□□ 0.08
CIITA-212ENST00000618207 MPRIPQ6WCQ1 1025 aa15.53■□□□□ 0.08
CIITA-212ENST00000618207 MAP3K5Q99683 1374 aa15.53■□□□□ 0.08
CIITA-212ENST00000618207 SMARCA5O60264 1052 aaPredicted RBP15.53■□□□□ 0.08
CIITA-212ENST00000618207 DEKP35659 375 aaKnown RBP15.53■□□□□ 0.08
CIITA-212ENST00000618207 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
CIITA-212ENST00000618207 TBC1D32Q96NH3 1257 aa15.52■□□□□ 0.08
CIITA-212ENST00000618207 TAF7Q15545 349 aaPredicted RBP15.52■□□□□ 0.07
CIITA-212ENST00000618207 KCNH5Q8NCM2 988 aa15.52■□□□□ 0.07
CIITA-212ENST00000618207 AXIN2Q9Y2T1 843 aa15.52■□□□□ 0.07
CIITA-212ENST00000618207 RGS12O14924 1447 aa15.51■□□□□ 0.07
CIITA-212ENST00000618207 C22orf23Q9BZE7 217 aa15.51■□□□□ 0.07
CIITA-212ENST00000618207 ZNF142P52746 1687 aaPredicted RBP15.51■□□□□ 0.07
CIITA-212ENST00000618207 KCNQ3O43525 872 aa15.51■□□□□ 0.07
CIITA-212ENST00000618207 ZNF530Q6P9A1 599 aaPredicted RBP15.51■□□□□ 0.07
CIITA-212ENST00000618207 CABLES1Q8TDN4 633 aa15.51■□□□□ 0.07
CIITA-212ENST00000618207 ANXA1P04083 346 aa15.5■□□□□ 0.07
CIITA-212ENST00000618207 RGPD2P0DJD1 1756 aa15.5■□□□□ 0.07
CIITA-212ENST00000618207 FLIIQ13045 1269 aa15.5■□□□□ 0.07
CIITA-212ENST00000618207 NWD1Q149M9 1564 aa15.5■□□□□ 0.07
CIITA-212ENST00000618207 OTUD7AQ8TE49 926 aaPredicted RBP15.5■□□□□ 0.07
CIITA-212ENST00000618207 PTPRCP08575 1304 aa15.5■□□□□ 0.07
CIITA-212ENST00000618207 CEP85Q6P2H3 762 aa15.49■□□□□ 0.07
CIITA-212ENST00000618207 ANKRD24Q8TF21 1146 aa15.49■□□□□ 0.07
CIITA-212ENST00000618207 PHAXQ9H814 394 aaKnown RBP15.49■□□□□ 0.07
CIITA-212ENST00000618207 ATF3P18847 181 aa15.49■□□□□ 0.07
CIITA-212ENST00000618207 NFKBIBQ15653 356 aa15.49■□□□□ 0.07
CIITA-212ENST00000618207 HDGFL1Q5TGJ6 251 aa15.49■□□□□ 0.07
CIITA-212ENST00000618207 CCDC30Q5VVM6 783 aa15.49■□□□□ 0.07
CIITA-212ENST00000618207 C19orf44Q9H6X5 657 aa15.49■□□□□ 0.07
CIITA-212ENST00000618207 TEFQ10587 303 aa15.48■□□□□ 0.07
CIITA-212ENST00000618207 BECN1Q14457 450 aa15.48■□□□□ 0.07
CIITA-212ENST00000618207 ARHGEF25Q86VW2 580 aa15.48■□□□□ 0.07
CIITA-212ENST00000618207 ANKRD44Q8N8A2 993 aa15.48■□□□□ 0.07
CIITA-212ENST00000618207 RTL1A6NKG5 1358 aa15.47■□□□□ 0.07
CIITA-212ENST00000618207 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
CIITA-212ENST00000618207 KIF24Q5T7B8 1368 aa15.47■□□□□ 0.07
CIITA-212ENST00000618207 TBC1D2Q9BYX2 928 aa15.47■□□□□ 0.07
CIITA-212ENST00000618207 DCTPP1Q9H773 170 aa15.46■□□□□ 0.07
CIITA-212ENST00000618207 EXOC6BQ9Y2D4 811 aa15.46■□□□□ 0.07
CIITA-212ENST00000618207 FRAT2O75474 233 aaPredicted RBP15.45■□□□□ 0.06
CIITA-212ENST00000618207 CHRNA2Q15822 529 aa15.45■□□□□ 0.06
CIITA-212ENST00000618207 NFAT5O94916 1531 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms