RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 PHF8Q9UPP1 1060 aa10.86□□□□□ -0.67
SCAMP1-206ENST00000618166 FMN2Q9NZ56 1722 aa10.86□□□□□ -0.67
SCAMP1-206ENST00000618166 ADCY9O60503 1353 aa10.85□□□□□ -0.67
SCAMP1-206ENST00000618166 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
SCAMP1-206ENST00000618166 KIF3CO14782 793 aa10.85□□□□□ -0.67
SCAMP1-206ENST00000618166 SOX12O15370 315 aa10.84□□□□□ -0.67
SCAMP1-206ENST00000618166 LSM11P83369 360 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCAMP1-206ENST00000618166 PRDM11Q9NQV5 511 aa10.84□□□□□ -0.67
SCAMP1-206ENST00000618166 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
SCAMP1-206ENST00000618166 JMYQ8N9B5 988 aa10.83□□□□□ -0.68
SCAMP1-206ENST00000618166 PEAK1Q9H792 1746 aa10.83□□□□□ -0.68
SCAMP1-206ENST00000618166 NRXN1Q9ULB1 1477 aa10.83□□□□□ -0.68
SCAMP1-206ENST00000618166 MS4A4AQ96JQ5 239 aa10.82□□□□□ -0.68
SCAMP1-206ENST00000618166 STK26Q9P289 416 aa10.82□□□□□ -0.68
SCAMP1-206ENST00000618166 RGPD8O14715 1765 aaPredicted RBP10.82□□□□□ -0.68
SCAMP1-206ENST00000618166 KIAA0232Q92628 1395 aa10.82□□□□□ -0.68
SCAMP1-206ENST00000618166 TXNRD1Q16881 649 aa10.81□□□□□ -0.68
SCAMP1-206ENST00000618166 PMFBP1Q8TBY8 1022 aa10.81□□□□□ -0.68
SCAMP1-206ENST00000618166 KLRG1Q96E93 195 aa10.81□□□□□ -0.68
SCAMP1-206ENST00000618166 CRYBG1Q9Y4K1 1723 aa10.81□□□□□ -0.68
SCAMP1-206ENST00000618166 LARP1Q6PKG0 1096 aaKnown RBP10.8□□□□□ -0.68
SCAMP1-206ENST00000618166 TRPM3Q9HCF6 1732 aaPredicted RBP10.79□□□□□ -0.68
SCAMP1-206ENST00000618166 OVOS2A0A0G2JMS6 1433 aa10.79□□□□□ -0.68
SCAMP1-206ENST00000618166 OVOS2A0A0J9YW53 1432 aa10.79□□□□□ -0.68
SCAMP1-206ENST00000618166 TNS2Q63HR2 1409 aa10.79□□□□□ -0.68
SCAMP1-206ENST00000618166 OVOS2Q6IE36 1432 aa10.79□□□□□ -0.68
SCAMP1-206ENST00000618166 SSH2Q76I76 1423 aa10.79□□□□□ -0.68
SCAMP1-206ENST00000618166 GRIN3BO60391 1043 aa10.79□□□□□ -0.68
SCAMP1-206ENST00000618166 KHSRPQ92945 711 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■■□□□ 11.7
SCAMP1-206ENST00000618166 CLTCL1P53675 1640 aa10.79□□□□□ -0.68
SCAMP1-206ENST00000618166 WDR90Q96KV7 1748 aa10.79□□□□□ -0.68
SCAMP1-206ENST00000618166 ALS2Q96Q42 1657 aa10.79□□□□□ -0.68
SCAMP1-206ENST00000618166 SBF2Q86WG5 1849 aa10.78□□□□□ -0.68
SCAMP1-206ENST00000618166 TCP11L2Q8N4U5 519 aa10.77□□□□□ -0.68
SCAMP1-206ENST00000618166 ZC3H6P61129 1189 aaKnown RBP10.77□□□□□ -0.69
SCAMP1-206ENST00000618166 ZNF827Q17R98 1081 aa10.77□□□□□ -0.69
SCAMP1-206ENST00000618166 PLA2G2EQ9NZK7 142 aa10.77□□□□□ -0.69
SCAMP1-206ENST00000618166 ATP7BP35670 1465 aa10.76□□□□□ -0.69
SCAMP1-206ENST00000618166 FAM161AQ3B820 660 aa10.76□□□□□ -0.69
SCAMP1-206ENST00000618166 PARP4Q9UKK3 1724 aaKnown RBP10.75□□□□□ -0.69
SCAMP1-206ENST00000618166 NUP155O75694 1391 aa10.75□□□□□ -0.69
SCAMP1-206ENST00000618166 VGFO15240 615 aaPredicted RBP10.75□□□□□ -0.69
SCAMP1-206ENST00000618166 PBX2P40425 430 aa10.75□□□□□ -0.69
SCAMP1-206ENST00000618166 EVA1CP58658 441 aa10.75□□□□□ -0.69
SCAMP1-206ENST00000618166 IFT172Q9UG01 1749 aa10.75□□□□□ -0.69
SCAMP1-206ENST00000618166 PAPPAQ13219 1627 aa10.74□□□□□ -0.69
SCAMP1-206ENST00000618166 HSPA1AP0DMV8 641 aaKnown RBP10.74□□□□□ -0.69
SCAMP1-206ENST00000618166 HSPA1BP0DMV9 641 aaKnown RBP10.74□□□□□ -0.69
SCAMP1-206ENST00000618166 LRRC37A3O60309 1634 aa10.73□□□□□ -0.69
SCAMP1-206ENST00000618166 DHX57Q6P158 1386 aaKnown RBP10.73□□□□□ -0.69
SCAMP1-206ENST00000618166 TMEM132EQ6IEE7 984 aa10.73□□□□□ -0.69
SCAMP1-206ENST00000618166 PHRF1Q9P1Y6 1649 aaKnown RBP10.72□□□□□ -0.69
SCAMP1-206ENST00000618166 AATKQ6ZMQ8 1374 aa10.72□□□□□ -0.69
SCAMP1-206ENST00000618166 TOPAZ1Q8N9V7 1692 aa10.72□□□□□ -0.69
SCAMP1-206ENST00000618166 TOMM70O94826 608 aa10.72□□□□□ -0.69
SCAMP1-206ENST00000618166 POLD1P28340 1107 aa10.72□□□□□ -0.69
SCAMP1-206ENST00000618166 POTEEQ6S8J3 1075 aa10.72□□□□□ -0.69
SCAMP1-206ENST00000618166 MARCH10Q8NA82 808 aaPredicted RBP10.72□□□□□ -0.69
SCAMP1-206ENST00000618166 HCSTQ9UBK5 93 aa10.72□□□□□ -0.69
SCAMP1-206ENST00000618166 ACIN1Q9UKV3 1341 aaKnown RBP10.71□□□□□ -0.7
SCAMP1-206ENST00000618166 C11orf95C9JLR9 678 aaPredicted RBP10.7□□□□□ -0.7
SCAMP1-206ENST00000618166 NUTM2GQ5VZR2 741 aa10.7□□□□□ -0.7
SCAMP1-206ENST00000618166 SAFB2Q14151 953 aaKnown RBP eCLIP10.69□□□□□ -0.7
SCAMP1-206ENST00000618166 THRAP3Q9Y2W1 955 aaKnown RBP10.69□□□□□ -0.7
SCAMP1-206ENST00000618166 ABCC11Q96J66 1382 aa10.69□□□□□ -0.7
SCAMP1-206ENST00000618166 COL24A1Q17RW2 1714 aa10.69□□□□□ -0.7
SCAMP1-206ENST00000618166 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.68□□□□□ -0.7
SCAMP1-206ENST00000618166 RIOK3O14730 519 aaKnown RBP10.68□□□□□ -0.7
SCAMP1-206ENST00000618166 DDB1Q16531 1140 aa10.68□□□□□ -0.7
SCAMP1-206ENST00000618166 ZFP91Q96JP5 570 aaPredicted RBP10.68□□□□□ -0.7
SCAMP1-206ENST00000618166 NMRK2Q9NPI5 230 aa10.68□□□□□ -0.7
SCAMP1-206ENST00000618166 ADGRF5Q8IZF2 1346 aa10.68□□□□□ -0.7
SCAMP1-206ENST00000618166 LMO7Q8WWI1 1683 aa10.68□□□□□ -0.7
SCAMP1-206ENST00000618166 GPRASP1Q5JY77 1395 aa10.68□□□□□ -0.7
SCAMP1-206ENST00000618166 LRRC4BQ9NT99 713 aa10.67□□□□□ -0.7
SCAMP1-206ENST00000618166 PNPLA7Q6ZV29 1317 aa10.67□□□□□ -0.7
SCAMP1-206ENST00000618166 KNDC1Q76NI1 1749 aa10.67□□□□□ -0.7
SCAMP1-206ENST00000618166 NUDT7P0C024 238 aa10.66□□□□□ -0.7
SCAMP1-206ENST00000618166 AXIN2Q9Y2T1 843 aa10.66□□□□□ -0.7
SCAMP1-206ENST00000618166 KIF1BO60333 1816 aa10.66□□□□□ -0.7
SCAMP1-206ENST00000618166 VPS8Q8N3P4 1428 aa10.66□□□□□ -0.7
SCAMP1-206ENST00000618166 ARHGEF28Q8N1W1 1705 aaKnown RBP10.66□□□□□ -0.7
SCAMP1-206ENST00000618166 PPLO60437 1756 aa10.66□□□□□ -0.7
SCAMP1-206ENST00000618166 FAM50AQ14320 339 aaKnown RBP10.65□□□□□ -0.7
SCAMP1-206ENST00000618166 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
SCAMP1-206ENST00000618166 PRR36Q9H6K5 1346 aa10.65□□□□□ -0.7
SCAMP1-206ENST00000618166 COL5A2P05997 1499 aaPredicted RBP10.65□□□□□ -0.7
SCAMP1-206ENST00000618166 TULP4Q9NRJ4 1543 aa10.65□□□□□ -0.7
SCAMP1-206ENST00000618166 SLC16A10Q8TF71 515 aa10.65□□□□□ -0.71
SCAMP1-206ENST00000618166 LHX6Q9UPM6 363 aa10.65□□□□□ -0.71
SCAMP1-206ENST00000618166 BCL9O00512 1426 aa10.64□□□□□ -0.71
SCAMP1-206ENST00000618166 YTHDC2Q9H6S0 1430 aaKnown RBP10.64□□□□□ -0.71
SCAMP1-206ENST00000618166 CRB1P82279 1406 aa10.64□□□□□ -0.71
SCAMP1-206ENST00000618166 ANKARQ7Z5J8 1434 aa10.64□□□□□ -0.71
SCAMP1-206ENST00000618166 NLRP6P59044 892 aa10.64□□□□□ -0.71
SCAMP1-206ENST00000618166 FBXO22Q8NEZ5 403 aa10.63□□□□□ -0.71
SCAMP1-206ENST00000618166 RBM46Q8TBY0 533 aaKnown RBP10.63□□□□□ -0.71
SCAMP1-206ENST00000618166 ACSBG1Q96GR2 724 aa10.63□□□□□ -0.71
SCAMP1-206ENST00000618166 RPGRIP1LQ68CZ1 1315 aa10.62□□□□□ -0.71
SCAMP1-206ENST00000618166 MSL1Q68DK7 614 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms