RNA–Protein interactions for RNA: ENST00000618159.1

PSMB3-210, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-210ENST00000618159 ANKRD24Q8TF21 1146 aa13.23□□□□□ -0.29
PSMB3-210ENST00000618159 CD2APQ9Y5K6 639 aa13.23□□□□□ -0.29
PSMB3-210ENST00000618159 EVC2Q86UK5 1308 aa13.22□□□□□ -0.29
PSMB3-210ENST00000618159 MSH5O43196 834 aa13.22□□□□□ -0.29
PSMB3-210ENST00000618159 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
PSMB3-210ENST00000618159 APLP1P51693 650 aa13.22□□□□□ -0.29
PSMB3-210ENST00000618159 USP31Q70CQ4 1352 aa13.21□□□□□ -0.29
PSMB3-210ENST00000618159 KTN1Q86UP2 1357 aaKnown RBP13.21□□□□□ -0.29
PSMB3-210ENST00000618159 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.29
PSMB3-210ENST00000618159 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.29
PSMB3-210ENST00000618159 PCNTO95613 3336 aa13.2□□□□□ -0.3
PSMB3-210ENST00000618159 TOGARAM1Q9Y4F4 1720 aa13.2□□□□□ -0.3
PSMB3-210ENST00000618159 UBR3Q6ZT12 1888 aa13.2□□□□□ -0.3
PSMB3-210ENST00000618159 CICQ96RK0 1608 aaPredicted RBP13.2□□□□□ -0.3
PSMB3-210ENST00000618159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.18□□□□□ -0.3
PSMB3-210ENST00000618159 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
PSMB3-210ENST00000618159 IGSF1Q8N6C5 1336 aa13.17□□□□□ -0.3
PSMB3-210ENST00000618159 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
PSMB3-210ENST00000618159 NME9Q86XW9 330 aa13.17□□□□□ -0.3
PSMB3-210ENST00000618159 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
PSMB3-210ENST00000618159 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
PSMB3-210ENST00000618159 KIAA1551Q9HCM1 1747 aa13.16□□□□□ -0.3
PSMB3-210ENST00000618159 ITGB4P16144 1822 aa13.16□□□□□ -0.3
PSMB3-210ENST00000618159 USP47Q96K76 1375 aa13.16□□□□□ -0.3
PSMB3-210ENST00000618159 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
PSMB3-210ENST00000618159 KIF13BQ9NQT8 1826 aa13.16□□□□□ -0.3
PSMB3-210ENST00000618159 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.3
PSMB3-210ENST00000618159 CAPN15O75808 1086 aa13.15□□□□□ -0.3
PSMB3-210ENST00000618159 MEGF6O75095 1541 aa13.14□□□□□ -0.31
PSMB3-210ENST00000618159 TOMM70O94826 608 aa13.14□□□□□ -0.31
PSMB3-210ENST00000618159 AMIGO3Q86WK7 504 aa13.14□□□□□ -0.31
PSMB3-210ENST00000618159 BRCA1P38398 1863 aaKnown RBP13.13□□□□□ -0.31
PSMB3-210ENST00000618159 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
PSMB3-210ENST00000618159 IP6K1Q92551 441 aa13.13□□□□□ -0.31
PSMB3-210ENST00000618159 LTV1Q96GA3 475 aaPredicted RBP13.13□□□□□ -0.31
PSMB3-210ENST00000618159 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
PSMB3-210ENST00000618159 JMYQ8N9B5 988 aa13.12□□□□□ -0.31
PSMB3-210ENST00000618159 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
PSMB3-210ENST00000618159 PRELPP51888 382 aa13.11□□□□□ -0.31
PSMB3-210ENST00000618159 HTRA3P83110 453 aa13.11□□□□□ -0.31
PSMB3-210ENST00000618159 KLRG1Q96E93 195 aa13.11□□□□□ -0.31
PSMB3-210ENST00000618159 SMIM5Q71RC9 77 aa13.1□□□□□ -0.31
PSMB3-210ENST00000618159 NMRK2Q9NPI5 230 aa13.1□□□□□ -0.31
PSMB3-210ENST00000618159 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
PSMB3-210ENST00000618159 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
PSMB3-210ENST00000618159 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
PSMB3-210ENST00000618159 TNS4Q8IZW8 715 aa13.09□□□□□ -0.31
PSMB3-210ENST00000618159 ARFGEF1Q9Y6D6 1849 aa13.09□□□□□ -0.31
PSMB3-210ENST00000618159 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.32
PSMB3-210ENST00000618159 PHF14O94880 888 aa13.07□□□□□ -0.32
PSMB3-210ENST00000618159 HOXC9P31274 260 aa13.07□□□□□ -0.32
PSMB3-210ENST00000618159 RBM46Q8TBY0 533 aaKnown RBP13.07□□□□□ -0.32
PSMB3-210ENST00000618159 SBF1O95248 1867 aa13.06□□□□□ -0.32
PSMB3-210ENST00000618159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.06□□□□□ -0.32
PSMB3-210ENST00000618159 AK7Q96M32 723 aa13.06□□□□□ -0.32
PSMB3-210ENST00000618159 MAP3K19Q56UN5 1328 aa13.06□□□□□ -0.32
PSMB3-210ENST00000618159 A0A1W2PP64 1363 aa13.06□□□□□ -0.32
PSMB3-210ENST00000618159 ROCK2O75116 1388 aaKnown RBP13.06□□□□□ -0.32
PSMB3-210ENST00000618159 FBLN1P23142 703 aa13.05□□□□□ -0.32
PSMB3-210ENST00000618159 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
PSMB3-210ENST00000618159 HDGFL2Q7Z4V5 671 aaPredicted RBP13.05□□□□□ -0.32
PSMB3-210ENST00000618159 L3MBTL2Q969R5 705 aa13.05□□□□□ -0.32
PSMB3-210ENST00000618159 SLC12A5Q9H2X9 1139 aa13.05□□□□□ -0.32
PSMB3-210ENST00000618159 NSD3Q9BZ95 1437 aa13.05□□□□□ -0.32
PSMB3-210ENST00000618159 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
PSMB3-210ENST00000618159 NBPF6Q5VWK0 638 aa13.04□□□□□ -0.32
PSMB3-210ENST00000618159 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
PSMB3-210ENST00000618159 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
PSMB3-210ENST00000618159 NBPF4Q96M43 638 aa13.04□□□□□ -0.32
PSMB3-210ENST00000618159 TNRC6CQ9HCJ0 1690 aaKnown RBP13.04□□□□□ -0.32
PSMB3-210ENST00000618159 CGNL1Q0VF96 1302 aa13.04□□□□□ -0.32
PSMB3-210ENST00000618159 SSFA2P28290 1259 aa13.03□□□□□ -0.32
PSMB3-210ENST00000618159 FSTL1Q12841 308 aa13.03□□□□□ -0.32
PSMB3-210ENST00000618159 USHBP1Q8N6Y0 703 aa13.03□□□□□ -0.32
PSMB3-210ENST00000618159 BCS1LQ9Y276 419 aa13.03□□□□□ -0.32
PSMB3-210ENST00000618159 AMPHP49418 695 aa13.02□□□□□ -0.33
PSMB3-210ENST00000618159 ARHGAP27Q6ZUM4 889 aa13.02□□□□□ -0.33
PSMB3-210ENST00000618159 LINC00116Q8NCU8 138 aa13.02□□□□□ -0.33
PSMB3-210ENST00000618159 KCPQ6ZWJ8 1503 aa13.02□□□□□ -0.33
PSMB3-210ENST00000618159 A0A0G2JLW4 131 aa13.01□□□□□ -0.33
PSMB3-210ENST00000618159 TGFB2P61812 414 aa13.01□□□□□ -0.33
PSMB3-210ENST00000618159 C16orf71Q8IYS4 520 aaPredicted RBP13.01□□□□□ -0.33
PSMB3-210ENST00000618159 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
PSMB3-210ENST00000618159 PCDH11XQ9BZA7 1347 aa13.01□□□□□ -0.33
PSMB3-210ENST00000618159 PCDH11YQ9BZA8 1340 aa13.01□□□□□ -0.33
PSMB3-210ENST00000618159 C10orf71Q711Q0 1435 aa13.01□□□□□ -0.33
PSMB3-210ENST00000618159 C4AP0C0L4 1744 aa13□□□□□ -0.33
PSMB3-210ENST00000618159 RTL1A6NKG5 1358 aa13□□□□□ -0.33
PSMB3-210ENST00000618159 PLEKHG2Q9H7P9 1386 aa13□□□□□ -0.33
PSMB3-210ENST00000618159 CYP27B1O15528 508 aa13□□□□□ -0.33
PSMB3-210ENST00000618159 MMP10P09238 476 aa13□□□□□ -0.33
PSMB3-210ENST00000618159 RAPGEF4Q8WZA2 1011 aa13□□□□□ -0.33
PSMB3-210ENST00000618159 TERF2IPQ9NYB0 399 aa13□□□□□ -0.33
PSMB3-210ENST00000618159 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
PSMB3-210ENST00000618159 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
PSMB3-210ENST00000618159 PIGBQ92521 554 aa12.99□□□□□ -0.33
PSMB3-210ENST00000618159 CCDC88AQ3V6T2 1871 aa12.99□□□□□ -0.33
PSMB3-210ENST00000618159 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
PSMB3-210ENST00000618159 GNPATO15228 680 aa12.98□□□□□ -0.33
PSMB3-210ENST00000618159 FCHSD2O94868 740 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms