RNA–Protein interactions for RNA: ENST00000618137.1

NLRC3-205, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 1 (best)

Gene NLRC3, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-205ENST00000618137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.2
NLRC3-205ENST00000618137 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
NLRC3-205ENST00000618137 MYBBP1AQ9BQG0 1328 aaKnown RBP16.31■□□□□ 0.2
NLRC3-205ENST00000618137 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
NLRC3-205ENST00000618137 MARCH10Q8NA82 808 aaPredicted RBP16.3■□□□□ 0.2
NLRC3-205ENST00000618137 NUDCQ9Y266 331 aa16.3■□□□□ 0.2
NLRC3-205ENST00000618137 PCDH11XQ9BZA7 1347 aa16.29■□□□□ 0.2
NLRC3-205ENST00000618137 PCDH11YQ9BZA8 1340 aa16.29■□□□□ 0.2
NLRC3-205ENST00000618137 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
NLRC3-205ENST00000618137 FAM182BQ5T319 152 aa16.28■□□□□ 0.2
NLRC3-205ENST00000618137 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
NLRC3-205ENST00000618137 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.2
NLRC3-205ENST00000618137 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
NLRC3-205ENST00000618137 PKD1L3Q7Z443 1732 aa16.27■□□□□ 0.19
NLRC3-205ENST00000618137 SF3B2Q13435 895 aaKnown RBP16.26■□□□□ 0.19
NLRC3-205ENST00000618137 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
NLRC3-205ENST00000618137 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
NLRC3-205ENST00000618137 PLEKHO1Q53GL0 409 aaPredicted RBP16.25■□□□□ 0.19
NLRC3-205ENST00000618137 ANP32CO43423 234 aa16.24■□□□□ 0.19
NLRC3-205ENST00000618137 SHANK3Q9BYB0 1731 aa16.24■□□□□ 0.19
NLRC3-205ENST00000618137 TRIM37O94972 964 aa16.23■□□□□ 0.19
NLRC3-205ENST00000618137 HMOX1P09601 288 aa16.23■□□□□ 0.19
NLRC3-205ENST00000618137 IFNL2Q8IZJ0 200 aa16.23■□□□□ 0.19
NLRC3-205ENST00000618137 BCL11BQ9C0K0 894 aaPredicted RBP16.23■□□□□ 0.19
NLRC3-205ENST00000618137 CYP27B1O15528 508 aa16.22■□□□□ 0.19
NLRC3-205ENST00000618137 FCHSD2O94868 740 aa16.22■□□□□ 0.19
NLRC3-205ENST00000618137 U2AF1L5P0DN76 240 aaPredicted RBP16.22■□□□□ 0.19
NLRC3-205ENST00000618137 U2AF1Q01081 240 aaKnown RBP eCLIP16.22■□□□□ 0.19
NLRC3-205ENST00000618137 NKX1-1Q15270 411 aaPredicted RBP16.22■□□□□ 0.19
NLRC3-205ENST00000618137 HSP90AB1P08238 724 aaKnown RBP16.21■□□□□ 0.19
NLRC3-205ENST00000618137 BAG6P46379 1132 aa16.21■□□□□ 0.19
NLRC3-205ENST00000618137 PHKG2P15735 406 aa16.2■□□□□ 0.18
NLRC3-205ENST00000618137 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
NLRC3-205ENST00000618137 ZNF530Q6P9A1 599 aaPredicted RBP16.19■□□□□ 0.18
NLRC3-205ENST00000618137 RSPH6AQ9H0K4 717 aa16.19■□□□□ 0.18
NLRC3-205ENST00000618137 PNNQ9H307 717 aaKnown RBP16.19■□□□□ 0.18
NLRC3-205ENST00000618137 TNS1Q9HBL0 1735 aaKnown RBP16.19■□□□□ 0.18
NLRC3-205ENST00000618137 SBF2Q86WG5 1849 aa16.18■□□□□ 0.18
NLRC3-205ENST00000618137 C1orf141Q5JVX7 400 aa16.18■□□□□ 0.18
NLRC3-205ENST00000618137 APBA3O96018 575 aa16.17■□□□□ 0.18
NLRC3-205ENST00000618137 PRKAR2BP31323 418 aa16.17■□□□□ 0.18
NLRC3-205ENST00000618137 AKAP4Q5JQC9 854 aa16.17■□□□□ 0.18
NLRC3-205ENST00000618137 DCAF5Q96JK2 942 aa16.17■□□□□ 0.18
NLRC3-205ENST00000618137 PLSCR1O15162 318 aa16.16■□□□□ 0.18
NLRC3-205ENST00000618137 KCNQ2O43526 872 aa16.16■□□□□ 0.18
NLRC3-205ENST00000618137 GAS2L2Q8NHY3 880 aa16.16■□□□□ 0.18
NLRC3-205ENST00000618137 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
NLRC3-205ENST00000618137 NEFMP07197 916 aa16.15■□□□□ 0.18
NLRC3-205ENST00000618137 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
NLRC3-205ENST00000618137 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
NLRC3-205ENST00000618137 DOT1LQ8TEK3 1739 aa16.15■□□□□ 0.18
NLRC3-205ENST00000618137 RGPD3A6NKT7 1758 aaPredicted RBP16.14■□□□□ 0.17
NLRC3-205ENST00000618137 RGPD4Q7Z3J3 1758 aa16.14■□□□□ 0.17
NLRC3-205ENST00000618137 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
NLRC3-205ENST00000618137 WDR43Q15061 677 aaKnown RBP eCLIP16.14■□□□□ 0.17
NLRC3-205ENST00000618137 DEFB132Q7Z7B7 95 aa16.14■□□□□ 0.17
NLRC3-205ENST00000618137 SYTL4Q96C24 671 aaPredicted RBP16.14■□□□□ 0.17
NLRC3-205ENST00000618137 CAMKK2Q96RR4 588 aa16.13■□□□□ 0.17
NLRC3-205ENST00000618137 EN1Q05925 392 aaPredicted RBP16.12■□□□□ 0.17
NLRC3-205ENST00000618137 PTF1AQ7RTS3 328 aa16.12■□□□□ 0.17
NLRC3-205ENST00000618137 PHACTR3Q96KR7 559 aa16.12■□□□□ 0.17
NLRC3-205ENST00000618137 PLEKHF1Q96S99 279 aa16.11■□□□□ 0.17
NLRC3-205ENST00000618137 TMOD3Q9NYL9 352 aa16.11■□□□□ 0.17
NLRC3-205ENST00000618137 MAPK8IP3Q9UPT6 1336 aa16.11■□□□□ 0.17
NLRC3-205ENST00000618137 MAP3K5Q99683 1374 aa16.11■□□□□ 0.17
NLRC3-205ENST00000618137 TOGARAM1Q9Y4F4 1720 aa16.11■□□□□ 0.17
NLRC3-205ENST00000618137 KDM6AO15550 1401 aaPredicted RBP16.11■□□□□ 0.17
NLRC3-205ENST00000618137 GNAT3A8MTJ3 354 aa16.1■□□□□ 0.17
NLRC3-205ENST00000618137 HMGB2P26583 209 aaKnown RBP16.09■□□□□ 0.17
NLRC3-205ENST00000618137 EZH2Q15910 746 aaKnown RBP16.09■□□□□ 0.17
NLRC3-205ENST00000618137 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
NLRC3-205ENST00000618137 BTAF1O14981 1849 aa16.09■□□□□ 0.17
NLRC3-205ENST00000618137 HTATSF1O43719 755 aaKnown RBP16.08■□□□□ 0.16
NLRC3-205ENST00000618137 CABP4P57796 275 aa16.08■□□□□ 0.16
NLRC3-205ENST00000618137 PIGBQ92521 554 aa16.08■□□□□ 0.16
NLRC3-205ENST00000618137 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
NLRC3-205ENST00000618137 MRS2Q9HD23 443 aa16.08■□□□□ 0.16
NLRC3-205ENST00000618137 ADAMTS8Q9UP79 889 aa16.08■□□□□ 0.16
NLRC3-205ENST00000618137 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.16
NLRC3-205ENST00000618137 RNMTO43148 476 aaKnown RBP16.07■□□□□ 0.16
NLRC3-205ENST00000618137 SLC27A3Q5K4L6 730 aa16.07■□□□□ 0.16
NLRC3-205ENST00000618137 MRC1P22897 1456 aa16.07■□□□□ 0.16
NLRC3-205ENST00000618137 RREB1Q92766 1687 aa16.06■□□□□ 0.16
NLRC3-205ENST00000618137 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
NLRC3-205ENST00000618137 RTF1Q92541 710 aaKnown RBP16.06■□□□□ 0.16
NLRC3-205ENST00000618137 RUNDC1Q96C34 613 aa16.06■□□□□ 0.16
NLRC3-205ENST00000618137 SLC52A2Q9HAB3 445 aa16.06■□□□□ 0.16
NLRC3-205ENST00000618137 ITGB4P16144 1822 aa16.05■□□□□ 0.16
NLRC3-205ENST00000618137 SCN11AQ9UI33 1791 aa16.05■□□□□ 0.16
NLRC3-205ENST00000618137 CEMIPQ8WUJ3 1361 aa16.05■□□□□ 0.16
NLRC3-205ENST00000618137 NFE2L2Q16236 605 aa16.05■□□□□ 0.16
NLRC3-205ENST00000618137 CCDC184Q52MB2 194 aa16.05■□□□□ 0.16
NLRC3-205ENST00000618137 DIEXFQ68CQ4 756 aaKnown RBP16.05■□□□□ 0.16
NLRC3-205ENST00000618137 PNISRQ8TF01 805 aaKnown RBP16.05■□□□□ 0.16
NLRC3-205ENST00000618137 LGR6Q9HBX8 967 aa16.05■□□□□ 0.16
NLRC3-205ENST00000618137 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
NLRC3-205ENST00000618137 PROM2Q8N271 834 aa16.04■□□□□ 0.16
NLRC3-205ENST00000618137 NFATC2IPQ8NCF5 419 aa16.04■□□□□ 0.16
NLRC3-205ENST00000618137 NBPF14Q5TI25 921 aa16.03■□□□□ 0.16
NLRC3-205ENST00000618137 IL17REQ8NFR9 667 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms