RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ANAPC15P60006 121 aa13.11□□□□□ -0.31
CCDC144B-208ENST00000618081 TAX1BP1Q86VP1 789 aa13.11□□□□□ -0.31
CCDC144B-208ENST00000618081 CCDC112Q8NEF3 446 aa13.11□□□□□ -0.31
CCDC144B-208ENST00000618081 CDK19Q9BWU1 502 aa13.11□□□□□ -0.31
CCDC144B-208ENST00000618081 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
CCDC144B-208ENST00000618081 KIAA1328Q86T90 577 aa13.11□□□□□ -0.31
CCDC144B-208ENST00000618081 AACSQ86V21 672 aa13.11□□□□□ -0.31
CCDC144B-208ENST00000618081 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
CCDC144B-208ENST00000618081 LARP1BQ659C4 914 aaKnown RBP13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 ZPR1O75312 459 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 SULT6B1Q6IMI4 303 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 PRDM11Q9NQV5 511 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 RTEL1-TNFRSF6BF6WH68 1400 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 PLCD4Q9BRC7 762 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 PDE3AQ14432 1141 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 ANKLE2Q86XL3 938 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 C1orf115Q9H7X2 142 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 C9orf84Q5VXU9 1444 aa13.1□□□□□ -0.31
CCDC144B-208ENST00000618081 SMTNL1A8MU46 457 aa13.09□□□□□ -0.31
CCDC144B-208ENST00000618081 CEP126Q9P2H0 1117 aa13.09□□□□□ -0.31
CCDC144B-208ENST00000618081 IMMTQ16891 758 aaKnown RBP13.09□□□□□ -0.31
CCDC144B-208ENST00000618081 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
CCDC144B-208ENST00000618081 NFKBIBQ15653 356 aa13.09□□□□□ -0.31
CCDC144B-208ENST00000618081 USP5P45974 858 aa13.09□□□□□ -0.31
CCDC144B-208ENST00000618081 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
CCDC144B-208ENST00000618081 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.31
CCDC144B-208ENST00000618081 AKAP2Q9Y2D5 859 aa13.08□□□□□ -0.31
CCDC144B-208ENST00000618081 AIDAQ96BJ3 306 aa13.08□□□□□ -0.32
CCDC144B-208ENST00000618081 CAVIN4Q5BKX8 364 aa13.08□□□□□ -0.32
CCDC144B-208ENST00000618081 SPATA32Q96LK8 384 aa13.08□□□□□ -0.32
CCDC144B-208ENST00000618081 PIP4K2BP78356 416 aa13.08□□□□□ -0.32
CCDC144B-208ENST00000618081 SLC26A8Q96RN1 970 aa13.08□□□□□ -0.32
CCDC144B-208ENST00000618081 KIF14Q15058 1648 aa13.08□□□□□ -0.32
CCDC144B-208ENST00000618081 PPM1FP49593 454 aaPredicted RBP13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 TAF4BQ92750 862 aa13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 SCLT1Q96NL6 688 aa13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 EPB41L2O43491 1005 aaKnown RBP13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 FAM135AQ9P2D6 1515 aa13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 SLC52A1Q9NWF4 448 aa13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 ANKIB1Q9P2G1 1089 aa13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 VPS36Q86VN1 386 aa13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 EHMT1Q9H9B1 1298 aa13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 CCDC148Q8NFR7 591 aa13.07□□□□□ -0.32
CCDC144B-208ENST00000618081 ZSCAN31Q96LW9 406 aaPredicted RBP13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 RAB34Q9BZG1 259 aa13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 EXOSC9Q06265 439 aaKnown RBP13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 SLF2Q8IX21 1173 aa13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 CRACR2BQ8N4Y2 399 aaPredicted RBP13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 TSG101Q99816 390 aa13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 CCDC196A0A1B0GTZ2 297 aa13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 K7ELQ4 463 aaPredicted RBP13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 MAP4K4O95819 1239 aaPredicted RBP13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 PDRG1Q9NUG6 133 aa13.06□□□□□ -0.32
CCDC144B-208ENST00000618081 STAMBPO95630 424 aa13.05□□□□□ -0.32
CCDC144B-208ENST00000618081 RUSC2Q8N2Y8 1516 aa13.05□□□□□ -0.32
CCDC144B-208ENST00000618081 DRC1Q96MC2 740 aa13.05□□□□□ -0.32
CCDC144B-208ENST00000618081 FAM177A1Q8N128 213 aaPredicted RBP13.05□□□□□ -0.32
CCDC144B-208ENST00000618081 HSP90AB3PQ58FF7 597 aa13.05□□□□□ -0.32
CCDC144B-208ENST00000618081 CUL5Q93034 780 aa13.05□□□□□ -0.32
CCDC144B-208ENST00000618081 DAPK1P53355 1430 aa13.05□□□□□ -0.32
CCDC144B-208ENST00000618081 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
CCDC144B-208ENST00000618081 CWC27Q6UX04 472 aaKnown RBP13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 MKNK2Q9HBH9 465 aa13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 PPP6R1Q9UPN7 881 aa13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 ZNF644Q9H582 1327 aaPredicted RBP13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 ATAD2Q6PL18 1390 aa13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 ERBINQ96RT1 1412 aa13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 IDH1O75874 414 aaKnown RBP13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 UPF3BQ9BZI7 483 aaKnown RBP13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 METTL24Q5JXM2 366 aa13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 PDZRN3Q9UPQ7 1066 aa13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 ABCF2Q9UG63 623 aa13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 IBSPP21815 317 aaPredicted RBP13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 ATF7IPQ6VMQ6 1270 aa13.04□□□□□ -0.32
CCDC144B-208ENST00000618081 USP8P40818 1118 aa13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 SPA17Q15506 151 aa13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 DZIP1Q86YF9 867 aaKnown RBP13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 FEZ1Q99689 392 aa13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 POLA1P09884 1462 aaPredicted RBP13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 MCM3P25205 808 aa13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 FKBP15Q5T1M5 1219 aa13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 CHD1LQ86WJ1 897 aa13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 JAKMIP1Q96N16 626 aaKnown RBP13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 FAM193AP78312 1265 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms