RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 TBC1D9Q6ZT07 1266 aa13.07□□□□□ -0.32
CPEB1-215ENST00000617958 PRAM1Q96QH2 718 aa13.07□□□□□ -0.32
CPEB1-215ENST00000617958 RPGRIP1LQ68CZ1 1315 aa13.06□□□□□ -0.32
CPEB1-215ENST00000617958 ADAMTSL3P82987 1691 aa13.06□□□□□ -0.32
CPEB1-215ENST00000617958 TPM3P06753 285 aa13.06□□□□□ -0.32
CPEB1-215ENST00000617958 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
CPEB1-215ENST00000617958 ATF7IPQ6VMQ6 1270 aa13.06□□□□□ -0.32
CPEB1-215ENST00000617958 TCP11L2Q8N4U5 519 aa13.06□□□□□ -0.32
CPEB1-215ENST00000617958 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
CPEB1-215ENST00000617958 CGNQ9P2M7 1197 aaKnown RBP13.06□□□□□ -0.32
CPEB1-215ENST00000617958 ADGRB1O14514 1584 aa13.06□□□□□ -0.32
CPEB1-215ENST00000617958 TRIM27P14373 513 aa13.06□□□□□ -0.32
CPEB1-215ENST00000617958 ZNF771Q7L3S4 317 aaPredicted RBP13.06□□□□□ -0.32
CPEB1-215ENST00000617958 ZNF830Q96NB3 372 aaPredicted RBP13.06□□□□□ -0.32
CPEB1-215ENST00000617958 AK9Q5TCS8 1911 aa13.06□□□□□ -0.32
CPEB1-215ENST00000617958 UBR1Q8IWV7 1749 aa13.05□□□□□ -0.32
CPEB1-215ENST00000617958 RBM27Q9P2N5 1060 aaKnown RBP13.05□□□□□ -0.32
CPEB1-215ENST00000617958 ABCC11Q96J66 1382 aa13.05□□□□□ -0.32
CPEB1-215ENST00000617958 CDC45O75419 566 aa13.05□□□□□ -0.32
CPEB1-215ENST00000617958 NCKAP5LQ9HCH0 1330 aa13.05□□□□□ -0.32
CPEB1-215ENST00000617958 MED14O60244 1454 aa13.05□□□□□ -0.32
CPEB1-215ENST00000617958 ANKRD36BQ8N2N9 1353 aa13.05□□□□□ -0.32
CPEB1-215ENST00000617958 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
CPEB1-215ENST00000617958 TSPYL1Q9H0U9 437 aa13.04□□□□□ -0.32
CPEB1-215ENST00000617958 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
CPEB1-215ENST00000617958 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
CPEB1-215ENST00000617958 USP32Q8NFA0 1604 aa13.04□□□□□ -0.32
CPEB1-215ENST00000617958 IRX5P78411 483 aaPredicted RBP13.03□□□□□ -0.32
CPEB1-215ENST00000617958 ITPRIPQ8IWB1 547 aa13.03□□□□□ -0.32
CPEB1-215ENST00000617958 TSC1Q92574 1164 aa13.03□□□□□ -0.32
CPEB1-215ENST00000617958 ALKQ9UM73 1620 aa13.03□□□□□ -0.32
CPEB1-215ENST00000617958 U2AF2P26368 475 aaKnown RBP eCLIP13.03□□□□□ -0.32
CPEB1-215ENST00000617958 LNPKQ9C0E8 428 aa13.03□□□□□ -0.32
CPEB1-215ENST00000617958 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.32
CPEB1-215ENST00000617958 SLFN14P0C7P3 912 aa13.02□□□□□ -0.32
CPEB1-215ENST00000617958 ZDHHC9Q9Y397 364 aa13.02□□□□□ -0.32
CPEB1-215ENST00000617958 IPO8O15397 1037 aaKnown RBP13.02□□□□□ -0.33
CPEB1-215ENST00000617958 JARID2Q92833 1246 aaPredicted RBP13.02□□□□□ -0.33
CPEB1-215ENST00000617958 TIGD1Q96MW7 591 aa13.02□□□□□ -0.33
CPEB1-215ENST00000617958 MYO3AQ8NEV4 1616 aa13.01□□□□□ -0.33
CPEB1-215ENST00000617958 TULP2O00295 520 aa13.01□□□□□ -0.33
CPEB1-215ENST00000617958 ST18O60284 1047 aa13.01□□□□□ -0.33
CPEB1-215ENST00000617958 SLC12A5Q9H2X9 1139 aa13.01□□□□□ -0.33
CPEB1-215ENST00000617958 SMC4Q9NTJ3 1288 aa13.01□□□□□ -0.33
CPEB1-215ENST00000617958 DDX41Q9UJV9 622 aaKnown RBP13.01□□□□□ -0.33
CPEB1-215ENST00000617958 MORC2Q9Y6X9 1032 aaPredicted RBP13.01□□□□□ -0.33
CPEB1-215ENST00000617958 THEMISQ8N1K5 641 aaPredicted RBP13.01□□□□□ -0.33
CPEB1-215ENST00000617958 KIAA1524Q8TCG1 905 aa13.01□□□□□ -0.33
CPEB1-215ENST00000617958 CTNNA3Q9UI47 895 aa13.01□□□□□ -0.33
CPEB1-215ENST00000617958 IL16Q14005 1332 aa13.01□□□□□ -0.33
CPEB1-215ENST00000617958 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
CPEB1-215ENST00000617958 NRXN3Q9Y4C0 1643 aa13.01□□□□□ -0.33
CPEB1-215ENST00000617958 YTHDC2Q9H6S0 1430 aaKnown RBP13□□□□□ -0.33
CPEB1-215ENST00000617958 CALCOCO1Q9P1Z2 691 aa13□□□□□ -0.33
CPEB1-215ENST00000617958 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
CPEB1-215ENST00000617958 ADAMTS13Q76LX8 1427 aa12.99□□□□□ -0.33
CPEB1-215ENST00000617958 SBNO2Q9Y2G9 1366 aa12.99□□□□□ -0.33
CPEB1-215ENST00000617958 BRPF1P55201 1214 aaPredicted RBP12.99□□□□□ -0.33
CPEB1-215ENST00000617958 PKP1Q13835 747 aa12.99□□□□□ -0.33
CPEB1-215ENST00000617958 RNF214Q8ND24 703 aa12.99□□□□□ -0.33
CPEB1-215ENST00000617958 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
CPEB1-215ENST00000617958 CEP170BQ9Y4F5 1589 aaPredicted RBP12.98□□□□□ -0.33
CPEB1-215ENST00000617958 TMEM57Q8N5G2 664 aa12.98□□□□□ -0.33
CPEB1-215ENST00000617958 TERF2Q15554 542 aa12.98□□□□□ -0.33
CPEB1-215ENST00000617958 CARD14Q9BXL6 1004 aa12.98□□□□□ -0.33
CPEB1-215ENST00000617958 USP26Q9BXU7 913 aa12.98□□□□□ -0.33
CPEB1-215ENST00000617958 NSFL1CQ9UNZ2 370 aaKnown RBP12.98□□□□□ -0.33
CPEB1-215ENST00000617958 PTPRUQ92729 1446 aa12.98□□□□□ -0.33
CPEB1-215ENST00000617958 ALDH1L2Q3SY69 923 aa12.98□□□□□ -0.33
CPEB1-215ENST00000617958 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
CPEB1-215ENST00000617958 ATAD2Q6PL18 1390 aa12.97□□□□□ -0.33
CPEB1-215ENST00000617958 PIK3R4Q99570 1358 aa12.97□□□□□ -0.33
CPEB1-215ENST00000617958 VGLL3A8MV65 326 aa12.97□□□□□ -0.33
CPEB1-215ENST00000617958 BRD1O95696 1058 aa12.97□□□□□ -0.33
CPEB1-215ENST00000617958 KCNJ4P48050 445 aa12.97□□□□□ -0.33
CPEB1-215ENST00000617958 NCBP1Q09161 790 aaKnown RBP12.97□□□□□ -0.33
CPEB1-215ENST00000617958 ROBO2Q9HCK4 1378 aa12.97□□□□□ -0.33
CPEB1-215ENST00000617958 ADCY5O95622 1261 aa12.97□□□□□ -0.33
CPEB1-215ENST00000617958 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
CPEB1-215ENST00000617958 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
CPEB1-215ENST00000617958 ZNF428Q96B54 188 aa12.97□□□□□ -0.33
CPEB1-215ENST00000617958 USP25Q9UHP3 1055 aa12.97□□□□□ -0.33
CPEB1-215ENST00000617958 RRP7AQ9Y3A4 280 aaKnown RBP12.97□□□□□ -0.33
CPEB1-215ENST00000617958 KCNA6P17658 529 aa12.96□□□□□ -0.33
CPEB1-215ENST00000617958 MCM2P49736 904 aa12.96□□□□□ -0.33
CPEB1-215ENST00000617958 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.96□□□□□ -0.33
CPEB1-215ENST00000617958 TTC12Q9H892 705 aaPredicted RBP12.96□□□□□ -0.33
CPEB1-215ENST00000617958 AMOTL2Q9Y2J4 779 aa12.96□□□□□ -0.33
CPEB1-215ENST00000617958 NEUROD2Q15784 382 aa12.96□□□□□ -0.34
CPEB1-215ENST00000617958 FAM53CQ9NYF3 392 aa12.96□□□□□ -0.34
CPEB1-215ENST00000617958 NOB1Q9ULX3 412 aaKnown RBP12.96□□□□□ -0.34
CPEB1-215ENST00000617958 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
CPEB1-215ENST00000617958 SMTNL1A8MU46 457 aa12.95□□□□□ -0.34
CPEB1-215ENST00000617958 ANKRD45Q5TZF3 282 aa12.95□□□□□ -0.34
CPEB1-215ENST00000617958 TMEM87AQ8NBN3 555 aa12.95□□□□□ -0.34
CPEB1-215ENST00000617958 GOLGA6L6A8MZA4 724 aa12.94□□□□□ -0.34
CPEB1-215ENST00000617958 KDM4AO75164 1064 aa12.94□□□□□ -0.34
CPEB1-215ENST00000617958 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
CPEB1-215ENST00000617958 KRT222Q8N1A0 295 aa12.94□□□□□ -0.34
CPEB1-215ENST00000617958 ZGPATQ8N5A5 531 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms